| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU356691 |
Definition |
Pseudomonas phage ZC08, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
70774 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
83 |
%GC |
43.07 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AMD43520.1 | KU356691_p36 | hypothetical protein | phrog_30324 | unknown function | unknown function | 1 | 44315 | 44605 |
| AMD43511.1 | KU356691_p45 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 48701 | 49714 |
| AMD43493.1 | KU356691_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57673 | 57873 |
| AMD43553.1 | KU356691_p3 | hypothetical protein | phrog_38322 | unknown function | unknown function | 1 | 3199 | 4674 |
| AMD43521.1 | KU356691_p35 | hypothetical protein | phrog_23871 | unknown function | unknown function | 1 | 44173 | 44328 |
| AMD43514.1 | KU356691_p42 | hypothetical protein | phrog_36728 | unknown function | unknown function | 1 | 47334 | 47504 |
| AMD43509.1 | KU356691_p47 | hypothetical protein | phrog_21479 | unknown function | unknown function | 1 | 50907 | 51107 |
| AMD43505.1 | KU356691_p51 | hypothetical protein | phrog_29220 | unknown function | unknown function | 1 | 54008 | 54199 |
| AMD43550.1 | KU356691_p6 | hypothetical protein | phrog_4950 | tail fiber protein | tail | 1 | 6701 | 7351 |
| AMD43535.1 | KU356691_p21 | major capsid protein | phrog_1357 | major head protein | head and packaging | -1 | 31852 | 33048 |
| AMD43498.1 | KU356691_p58 | hypothetical protein | phrog_34167 | unknown function | unknown function | 1 | 56177 | 56530 |
| AMD43506.1 | KU356691_p50 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52850 | 54007 |
| AMD43507.1 | KU356691_p49 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 52098 | 52850 |
| AMD43502.1 | KU356691_p54 | hypothetical protein | phrog_4389 | unknown function | unknown function | 1 | 54828 | 55205 |
| AMD43551.1 | KU356691_p5 | hypothetical protein | phrog_4176 | tail fiber protein | tail | 1 | 5742 | 6704 |
| AMD43548.1 | KU356691_p8 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 7635 | 7874 |
| AMD43540.1 | KU356691_p16 | peptidoglycan hydrolase | phrog_31023 | unknown function | unknown function | -1 | 24649 | 27144 |
| AMD43475.1 | KU356691_p81 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 67784 | 70297 |
| AMD43478.1 | KU356691_p78 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 65610 | 66065 |
| AMD43536.1 | KU356691_p20 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 31205 | 31798 |
| AMD43533.1 | KU356691_p23 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 34187 | 34522 |
| AMD43499.1 | KU356691_p57 | hypothetical protein | phrog_29783 | unknown function | unknown function | 1 | 55763 | 56167 |
| AMD43496.1 | KU356691_p60 | hypothetical protein | phrog_2201 | unknown function | unknown function | 1 | 57027 | 57281 |
| AMD43487.1 | KU356691_p69 | hypothetical protein | phrog_3931 | unknown function | unknown function | 1 | 59291 | 59485 |
| AMD43525.1 | KU356691_p31 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 39492 | 41099 |
| AMD43530.1 | KU356691_p26 | hypothetical protein | phrog_315 | endolysin | lysis | -1 | 37234 | 37818 |
| AMD43488.1 | KU356691_p68 | hypothetical protein | phrog_2864 | unknown function | unknown function | 1 | 59146 | 59316 |
| AMD43549.1 | KU356691_p7 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 7367 | 7651 |
| AMD43497.1 | KU356691_p59 | hypothetical protein | phrog_2241 | unknown function | unknown function | 1 | 56733 | 57008 |
| AMD43479.1 | KU356691_p77 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 64471 | 65610 |
| AMD43477.1 | KU356691_p79 | hypothetical protein | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 66108 | 67325 |
| AMD43522.1 | KU356691_p34 | hypothetical protein | phrog_38673 | unknown function | unknown function | 1 | 43748 | 44104 |
| AMD43473.1 | KU356691_p83 | hypothetical protein | phrog_36624 | unknown function | unknown function | 1 | 70595 | 70762 |
| AMD43492.1 | KU356691_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57984 | 58127 |
| AMD43537.1 | KU356691_p19 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 30338 | 31150 |
| AMD43503.1 | KU356691_p53 | hypothetical protein | phrog_7614 | unknown function | unknown function | 1 | 54452 | 54823 |
| AMD43504.1 | KU356691_p52 | hypothetical protein | phrog_30803 | unknown function | unknown function | 1 | 54196 | 54459 |
| AMD43486.1 | KU356691_p70 | hypothetical protein | phrog_11852 | unknown function | unknown function | 1 | 59475 | 59843 |
| AMD43552.1 | KU356691_p4 | hypothetical protein | phrog_33456 | unknown function | unknown function | 1 | 4794 | 5678 |
| AMD43484.1 | KU356691_p72 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60078 | 60509 |
| AMD43541.1 | KU356691_p15 | virion DNA-directed RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 13602 | 24635 |
| AMD43544.1 | KU356691_p12 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 11728 | 12462 |
| AMD43494.1 | KU356691_p62 | hypothetical protein | phrog_35883 | unknown function | unknown function | 1 | 57501 | 57731 |
| AMD43546.1 | KU356691_p10 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 8838 | 10985 |
| AMD43512.1 | KU356691_p44 | hypothetical protein | phrog_18104 | transcriptional regulator | transcription regulation | 1 | 48520 | 48708 |
| AMD43547.1 | KU356691_p9 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 7849 | 8820 |
| AMD43529.1 | KU356691_p27 | hypothetical protein | phrog_4237 | holin | lysis | -1 | 37802 | 38128 |
| AMD43543.1 | KU356691_p13 | hypothetical protein | phrog_33948 | unknown function | unknown function | 1 | 12467 | 13309 |
| AMD43554.1 | KU356691_p2 | hypothetical protein | phrog_9600 | tail assembly protein | tail | 1 | 2198 | 3211 |
| AMD43483.1 | KU356691_p73 | hypothetical protein | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 60521 | 60970 |
| AMD43513.1 | KU356691_p43 | hypothetical protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 47661 | 48452 |
| AMD43531.1 | KU356691_p25 | hypothetical protein | phrog_6197 | Rz-like spanin | lysis | -1 | 36750 | 37244 |
| AMD43523.1 | KU356691_p33 | hypothetical protein | phrog_32679 | unknown function | unknown function | 1 | 41814 | 41987 |
| AMD43485.1 | KU356691_p71 | hypothetical protein | phrog_33160 | unknown function | unknown function | 1 | 59833 | 60081 |
| AMD43500.1 | KU356691_p56 | hypothetical protein | phrog_28186 | unknown function | unknown function | 1 | 55563 | 55763 |
| AMD43545.1 | KU356691_p11 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 10982 | 11728 |
| AMD43516.1 | KU356691_p40 | hypothetical protein | phrog_7431 | unknown function | unknown function | 1 | 46449 | 46667 |
| AMD43517.1 | KU356691_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46190 | 46438 |
| AMD43539.1 | KU356691_p17 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 27159 | 27611 |
| AMD43495.1 | KU356691_p61 | hypothetical protein | phrog_34232 | unknown function | unknown function | 1 | 57283 | 57498 |
| AMD43489.1 | KU356691_p67 | hypothetical protein | phrog_20561 | unknown function | unknown function | 1 | 58901 | 59146 |
| AMD43482.1 | KU356691_p74 | hypothetical protein | phrog_34747 | unknown function | unknown function | 1 | 60967 | 61413 |
| AMD43491.1 | KU356691_p65 | hypothetical protein | phrog_5086 | unknown function | unknown function | 1 | 58120 | 58518 |
| AMD43532.1 | KU356691_p24 | hypothetical protein | phrog_1216 | portal protein | head and packaging | -1 | 34526 | 36763 |
| AMD43555.1 | KU356691_p1 | hypothetical protein | phrog_29769 | unknown function | unknown function | 1 | 48 | 2102 |
| AMD43481.1 | KU356691_p75 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 61413 | 62225 |
| AMD43518.1 | KU356691_p38 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 45741 | 46124 |
| AMD43534.1 | KU356691_p22 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 33060 | 34187 |
| AMD43515.1 | KU356691_p41 | hypothetical protein | phrog_32296 | unknown function | unknown function | 1 | 47167 | 47334 |
| AMD43519.1 | KU356691_p37 | hypothetical protein | phrog_38598 | unknown function | unknown function | 1 | 44865 | 45173 |
| AMD43510.1 | KU356691_p46 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 50016 | 50645 |
| AMD43508.1 | KU356691_p48 | DNA endonuclease I-HmuI | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51230 | 51853 |
| AMD43527.1 | KU356691_p29 | hypothetical protein | phrog_36335 | unknown function | unknown function | -1 | 38285 | 38782 |
| AMD43476.1 | KU356691_p80 | hypothetical protein | phrog_37286 | unknown function | unknown function | 1 | 67322 | 67783 |
| AMD43490.1 | KU356691_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58515 | 58904 |
| AMD43474.1 | KU356691_p82 | hypothetical protein | phrog_36530 | unknown function | unknown function | 1 | 70287 | 70595 |
| AMD43538.1 | KU356691_p18 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 27620 | 30328 |
| AMD43542.1 | KU356691_p14 | hypothetical protein | phrog_31787 | unknown function | unknown function | 1 | 13376 | 13558 |
| AMD43528.1 | KU356691_p28 | hypothetical protein | phrog_35363 | unknown function | unknown function | -1 | 38115 | 38285 |
| AMD43480.1 | KU356691_p76 | hypothetical protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 62304 | 64478 |
| AMD43501.1 | KU356691_p55 | hypothetical protein | phrog_33802 | unknown function | unknown function | 1 | 55202 | 55534 |
| AMD43526.1 | KU356691_p30 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 38782 | 39483 |
| AMD43524.1 | KU356691_p32 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 41074 | 41757 |