| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU687351 |
Definition |
Citrobacter phage SH5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; unclassified Kayfunavirus. |
DB of origin |
NUCCORE |
Length |
39832 |
Host Name |
Citrobacter freundii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
52.51 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AMR59616.1 | KU687351_p14 | hypothetical protein | phrog_2585 | nucleotide kinase | other | 1 | 8273 | 8593 |
| AMR59650.1 | KU687351_p48 | maturation protein | phrog_38 | terminase large subunit | head and packaging | 1 | 37103 | 38833 |
| AMR59634.1 | KU687351_p2 | hypothetical protein | phrog_11084 | unknown function | unknown function | 1 | 1134 | 1658 |
| AMR59607.1 | KU687351_p35 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 20684 | 21565 |
| ANS53191.1 | KU687351_p23 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11782 | 13179 |
| AMR59647.1 | KU687351_p30 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 16763 | 17629 |
| AMR59644.1 | KU687351_p29 | hypothetical protein | phrog_2251 | unknown function | unknown function | 1 | 16495 | 16770 |
| AMR59610.1 | KU687351_p36 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 21697 | 22746 |
| AMR59619.1 | KU687351_p11 | hypothetical protein | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 6522 | 6809 |
| AMR59638.1 | KU687351_p6 | hypothetical protein | phrog_7066 | unknown function | unknown function | 1 | 2374 | 2700 |
| AMR59624.1 | KU687351_p43 | tail fibers protein | phrog_8460 | tail fiber protein | tail | 1 | 33520 | 36018 |
| AMR59648.1 | KU687351_p31 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 17837 | 18109 |
| AMR59649.1 | KU687351_p46 | endopeptidase Rz | phrog_1327 | Rz-like spanin | lysis | 1 | 36624 | 37073 |
| AMR59618.1 | KU687351_p12 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6827 | 7897 |
| AMR59614.1 | KU687351_p16 | helix-destabilizing protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8935 | 9633 |
| AMR59609.1 | KU687351_p37 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 23067 | 23633 |
| AMR59637.1 | KU687351_p7 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2798 | 5479 |
| AMR59642.1 | KU687351_p21 | HNH endonuclease | phrog_4578 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11142 | 11507 |
| AMR59612.1 | KU687351_p18 | hypothetical protein | phrog_15211 | unknown function | unknown function | 1 | 10085 | 10309 |
| AMR59623.1 | KU687351_p42 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29556 | 33452 |
| AMR59617.1 | KU687351_p13 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 8019 | 8273 |
| AMR59629.1 | KU687351_p9 | hypothetical protein | phrog_8103 | unknown function | unknown function | 1 | 5771 | 6250 |
| AMR59646.1 | KU687351_p27 | HNS binding protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16008 | 16292 |
| AMR59651.1 | KU687351_p40 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 26669 | 27256 |
| AMR59643.1 | KU687351_p28 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 16289 | 16498 |
| AMR59627.1 | KU687351_p45 | DNA packaging protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 36256 | 36519 |
| AMR59640.1 | KU687351_p25 | hypothetical protein | phrog_18700 | unknown function | unknown function | 1 | 13182 | 13766 |
| AMR59615.1 | KU687351_p15 | bacterial RNA polymerase inhibitor | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8672 | 8887 |
| AMR59639.1 | KU687351_p22 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11482 | 13179 |
| AMR59631.1 | KU687351_p44 | lysis protein | phrog_920 | holin | lysis | 1 | 36065 | 36259 |
| AMR59630.1 | KU687351_p41 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 27268 | 29550 |
| AMR59621.1 | KU687351_p50 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 39124 | 39282 |
| AMR59613.1 | KU687351_p17 | endonuclease | phrog_27028 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9870 | 10088 |
| AMR59641.1 | KU687351_p20 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 10772 | 10984 |
| AMR59622.1 | KU687351_p49 | hypothetical protein | phrog_31393 | unknown function | unknown function | 1 | 37752 | 37877 |
| AMR59620.1 | KU687351_p10 | hypothetical protein | phrog_4383 | unknown function | unknown function | 1 | 6339 | 6518 |
| AMR59633.1 | KU687351_p3 | hypothetical protein | phrog_5058 | unknown function | unknown function | 1 | 1652 | 1807 |
| AMR59626.1 | KU687351_p8 | hypothetical protein | phrog_8082 | unknown function | unknown function | 1 | 5492 | 5692 |
| AMR59632.1 | KU687351_p1 | hypothetical protein | phrog_336 | unknown function | unknown function | 1 | 934 | 1137 |
| AMR59608.1 | KU687351_p34 | head-to-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 19011 | 20579 |
| AMR59628.1 | KU687351_p38 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 23645 | 26014 |
| ANS53192.1 | KU687351_p24 | hypothetical protein | phrog_5140 | unknown function | unknown function | 1 | 12908 | 13255 |
| AMR59636.1 | KU687351_p4 | hypothetical protein | phrog_7319 | unknown function | unknown function | 1 | 2006 | 2173 |
| AMR59611.1 | KU687351_p19 | N-acetylmuramoyl-l-alanine amidase | phrog_822 | amidase | lysis | 1 | 10299 | 10757 |
| ANS53193.1 | KU687351_p47 | endopeptidase Rz1 | phrog_4306 | Rz-like spanin | lysis | 1 | 36727 | 36999 |
| AMR59645.1 | KU687351_p26 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13837 | 16008 |
| AMR59605.1 | KU687351_p33 | hypothetical protein | phrog_2746 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18348 | 18752 |
| AMR59606.1 | KU687351_p32 | head protein | phrog_1391 | unknown function | unknown function | 1 | 18120 | 18344 |
| AMR59625.1 | KU687351_p39 | internal virion protein A | phrog_308 | internal virion protein | head and packaging | 1 | 26090 | 26548 |
| AMR59635.1 | KU687351_p5 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 2177 | 2374 |