Genomic map of Citrobacter phage SH5 (KU687351)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU687351
Definition
Citrobacter phage SH5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; unclassified Kayfunavirus.
DB of origin
NUCCORE
Length
39832
Host Name
Citrobacter freundii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
52.51
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMR59616.1 KU687351_p14 hypothetical protein phrog_2585 nucleotide kinase other 1 8273 8593
AMR59650.1 KU687351_p48 maturation protein phrog_38 terminase large subunit head and packaging 1 37103 38833
AMR59634.1 KU687351_p2 hypothetical protein phrog_11084 unknown function unknown function 1 1134 1658
AMR59607.1 KU687351_p35 capsid assembly protein phrog_1052 head assembly head and packaging 1 20684 21565
ANS53191.1 KU687351_p23 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11782 13179
AMR59647.1 KU687351_p30 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16763 17629
AMR59644.1 KU687351_p29 hypothetical protein phrog_2251 unknown function unknown function 1 16495 16770
AMR59610.1 KU687351_p36 major capsid protein phrog_267 major head protein head and packaging 1 21697 22746
AMR59619.1 KU687351_p11 hypothetical protein phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6522 6809
AMR59638.1 KU687351_p6 hypothetical protein phrog_7066 unknown function unknown function 1 2374 2700
AMR59624.1 KU687351_p43 tail fibers protein phrog_8460 tail fiber protein tail 1 33520 36018
AMR59648.1 KU687351_p31 hypothetical protein phrog_1447 unknown function unknown function 1 17837 18109
AMR59649.1 KU687351_p46 endopeptidase Rz phrog_1327 Rz-like spanin lysis 1 36624 37073
AMR59618.1 KU687351_p12 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6827 7897
AMR59614.1 KU687351_p16 helix-destabilizing protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8935 9633
AMR59609.1 KU687351_p37 tail tubular protein A phrog_446 tail protein tail 1 23067 23633
AMR59637.1 KU687351_p7 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2798 5479
AMR59642.1 KU687351_p21 HNH endonuclease phrog_4578 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11142 11507
AMR59612.1 KU687351_p18 hypothetical protein phrog_15211 unknown function unknown function 1 10085 10309
AMR59623.1 KU687351_p42 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29556 33452
AMR59617.1 KU687351_p13 hypothetical protein phrog_1777 unknown function unknown function 1 8019 8273
AMR59629.1 KU687351_p9 hypothetical protein phrog_8103 unknown function unknown function 1 5771 6250
AMR59646.1 KU687351_p27 HNS binding protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 16008 16292
AMR59651.1 KU687351_p40 internal virion protein B phrog_805 internal virion protein head and packaging 1 26669 27256
AMR59643.1 KU687351_p28 hypothetical protein phrog_1334 unknown function unknown function 1 16289 16498
AMR59627.1 KU687351_p45 DNA packaging protein phrog_1351 terminase small subunit head and packaging 1 36256 36519
AMR59640.1 KU687351_p25 hypothetical protein phrog_18700 unknown function unknown function 1 13182 13766
AMR59615.1 KU687351_p15 bacterial RNA polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8672 8887
AMR59639.1 KU687351_p22 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11482 13179
AMR59631.1 KU687351_p44 lysis protein phrog_920 holin lysis 1 36065 36259
AMR59630.1 KU687351_p41 internal virion protein C phrog_1339 internal virion protein head and packaging 1 27268 29550
AMR59621.1 KU687351_p50 hypothetical protein phrog_2193 unknown function unknown function 1 39124 39282
AMR59613.1 KU687351_p17 endonuclease phrog_27028 endonuclease DNA, RNA and nucleotide metabolism 1 9870 10088
AMR59641.1 KU687351_p20 hypothetical protein phrog_1950 unknown function unknown function 1 10772 10984
AMR59622.1 KU687351_p49 hypothetical protein phrog_31393 unknown function unknown function 1 37752 37877
AMR59620.1 KU687351_p10 hypothetical protein phrog_4383 unknown function unknown function 1 6339 6518
AMR59633.1 KU687351_p3 hypothetical protein phrog_5058 unknown function unknown function 1 1652 1807
AMR59626.1 KU687351_p8 hypothetical protein phrog_8082 unknown function unknown function 1 5492 5692
AMR59632.1 KU687351_p1 hypothetical protein phrog_336 unknown function unknown function 1 934 1137
AMR59608.1 KU687351_p34 head-to-tail connector protein phrog_449 head-tail adaptor connector 1 19011 20579
AMR59628.1 KU687351_p38 tail tubular protein B phrog_457 tail protein tail 1 23645 26014
ANS53192.1 KU687351_p24 hypothetical protein phrog_5140 unknown function unknown function 1 12908 13255
AMR59636.1 KU687351_p4 hypothetical protein phrog_7319 unknown function unknown function 1 2006 2173
AMR59611.1 KU687351_p19 N-acetylmuramoyl-l-alanine amidase phrog_822 amidase lysis 1 10299 10757
ANS53193.1 KU687351_p47 endopeptidase Rz1 phrog_4306 Rz-like spanin lysis 1 36727 36999
AMR59645.1 KU687351_p26 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13837 16008
AMR59605.1 KU687351_p33 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18348 18752
AMR59606.1 KU687351_p32 head protein phrog_1391 unknown function unknown function 1 18120 18344
AMR59625.1 KU687351_p39 internal virion protein A phrog_308 internal virion protein head and packaging 1 26090 26548
AMR59635.1 KU687351_p5 hypothetical protein phrog_2385 unknown function unknown function 1 2177 2374