Genomic map of Pseudomonas phage phiAH14a (KU708004)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU708004
Definition
Pseudomonas phage phiAH14a, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
55060
Host Name
Pseudomonas
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
58.13
Number of singletons
25
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMW64525.1 KU708004_p65 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 33189 33917
AMW64492.1 KU708004_p32 tail assembly protein phrog_32 tail assembly protein tail -1 13998 14579
AMW64555.1 KU708004_p95 Rz1 lysis protein phrog_3198 Rz-like spanin lysis 1 54708 55022
AMW64463.1 KU708004_p3 hypothetical protein singleton unknown function unknown function -1 1475 1678
AMW64510.1 KU708004_p50 NinB protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 23932 24348
AMW64487.1 KU708004_p27 hypothetical protein phrog_2201 unknown function unknown function -1 12020 12262
AMW64531.1 KU708004_p71 hypothetical protein phrog_9369 unknown function unknown function 1 37131 37325
AMW64491.1 KU708004_p31 hypothetical protein singleton unknown function unknown function 1 13859 13975
AMW64468.1 KU708004_p8 hypothetical protein singleton unknown function unknown function -1 3931 4449
AMW64534.1 KU708004_p74 hypothetical protein phrog_569 tail length tape measure protein tail 1 38474 38863
AMW64462.1 KU708004_p2 hypothetical protein phrog_4764 excisionase integration and excision -1 1263 1457
AMW64526.1 KU708004_p66 major capsid protein phrog_247 major head protein head and packaging 1 33930 34892
AMW64511.1 KU708004_p51 hypothetical protein phrog_25658 unknown function unknown function 1 24348 24527
AMW64552.1 KU708004_p92 hypothetical protein phrog_4912 tail fiber assembly tail 1 53867 54079
AMW64540.1 KU708004_p80 hypothetical protein phrog_3377 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44139 44660
AMW64504.1 KU708004_p44 ParBc-like nuclease phrog_4715 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 20094 20939
AMW64537.1 KU708004_p77 minor tail protein phrog_14 minor tail protein tail 1 42677 43015
AMW64513.1 KU708004_p53 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 24688 25332
AMW64519.1 KU708004_p59 hypothetical protein phrog_513 transposase integration and excision 1 27714 28337
AMW64522.1 KU708004_p62 portal protein phrog_145 portal protein head and packaging 1 30139 31557
AMW64516.1 KU708004_p56 peptidase M48 phrog_2359 holin lysis 1 26628 26951
AMW64527.1 KU708004_p67 hypothetical protein phrog_2101 unknown function unknown function 1 34918 35529
AMW64544.1 KU708004_p84 tail assembly protein I phrog_32 tail assembly protein tail 1 46716 47309
AMW64475.1 KU708004_p15 hypothetical protein phrog_9129 unknown function unknown function -1 6561 7154
AMW64543.1 KU708004_p83 lipoprotein phrog_890 lipoprotein other 1 46238 46660
AMW64508.1 KU708004_p48 hypothetical protein singleton unknown function unknown function 1 23055 23783
AMW64553.1 KU708004_p93 peptidoglycan hydrolase phrog_938 endolysin lysis 1 54138 54563
AMW64529.1 KU708004_p69 tail attachment protein phrog_161 head closure Hc1 connector 1 36110 36481
AMW64528.1 KU708004_p68 head-tail connector protein phrog_477 head-tail adaptor Ad1 connector 1 35589 36092
AMW64549.1 KU708004_p89 hypothetical protein singleton unknown function unknown function 1 52288 52632
AMW64499.1 KU708004_p39 transcription repressor phrog_4 transcriptional repressor transcription regulation -1 17503 18264
AMW64539.1 KU708004_p79 hypothetical protein singleton unknown function unknown function -1 43851 44018
AMW64532.1 KU708004_p72 tail terminator protein phrog_179 tail terminator connector 1 37325 37741
AMW64486.1 KU708004_p26 hypothetical protein phrog_924 unknown function unknown function -1 11672 11998
AMW64545.1 KU708004_p85 hypothetical protein singleton unknown function unknown function 1 47347 47544
AMW64498.1 KU708004_p38 hypothetical protein singleton unknown function unknown function -1 16936 17250
AMW64514.1 KU708004_p54 hypothetical protein phrog_3412 unknown function unknown function 1 25329 26015
AMW64548.1 KU708004_p88 hypothetical protein phrog_4047 unknown function unknown function 1 51626 51952
AMW64535.1 KU708004_p75 hypothetical protein phrog_680 tail length tape measure protein tail 1 38881 39177
AMW64515.1 KU708004_p55 hypothetical protein singleton unknown function unknown function -1 26084 26614
AMW64461.1 KU708004_p1 integrase phrog_1 integrase integration and excision -1 262 1251
AMW64518.1 KU708004_p58 proteasome subunit beta phrog_1040 peptidase HslV family other 1 27278 27748
AMW64495.1 KU708004_p35 hypothetical protein singleton unknown function unknown function -1 15036 15452
AMW64520.1 KU708004_p60 hypothetical protein phrog_546 unknown function unknown function 1 28369 28845
AMW64547.1 KU708004_p87 tail fiber protein phrog_31 central tail fiber J tail 1 47934 51626
AMW64505.1 KU708004_p45 replication protein phrog_11527 unknown function unknown function 1 20941 21909
AMW64469.1 KU708004_p9 hypothetical protein phrog_31091 unknown function unknown function -1 4446 4685
AMW64481.1 KU708004_p21 hypothetical protein phrog_3483 unknown function unknown function -1 10117 10614
AMW64488.1 KU708004_p28 hypothetical protein phrog_10154 unknown function unknown function -1 12291 12482
AMW64484.1 KU708004_p24 hypothetical protein phrog_4801 unknown function unknown function -1 10933 11370
AMW64467.1 KU708004_p7 hypothetical protein phrog_1372 unknown function unknown function -1 3558 3884
AMW64507.1 KU708004_p47 hypothetical protein phrog_4389 unknown function unknown function 1 22678 23058
AMW64496.1 KU708004_p36 hypothetical protein singleton unknown function unknown function -1 15867 16370
AMW64482.1 KU708004_p22 hypothetical protein singleton unknown function unknown function -1 10611 10748
AMW64500.1 KU708004_p40 Cro-like repressor protein phrog_35 transcriptional repressor transcription regulation 1 18356 18565
AMW64503.1 KU708004_p43 hypothetical protein phrog_5931 unknown function unknown function 1 19224 20057
AMW64490.1 KU708004_p30 hypothetical protein phrog_32948 unknown function unknown function -1 13444 13803
AMW64494.1 KU708004_p34 hypothetical protein singleton unknown function unknown function -1 14923 15036
AMW64542.1 KU708004_p82 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45547 46179
AMW64506.1 KU708004_p46 hypothetical protein phrog_6028 unknown function unknown function 1 21896 22681
AMW64509.1 KU708004_p49 hypothetical protein singleton unknown function unknown function 1 23780 23935
AMW64538.1 KU708004_p78 minor tail protein phrog_18 minor tail protein tail 1 43027 43779
AMW64493.1 KU708004_p33 hypothetical protein phrog_914 unknown function unknown function -1 14637 14918
AMW64501.1 KU708004_p41 hypothetical protein phrog_101 CII-like transcriptional activator transcription regulation 1 18630 19100
AMW64477.1 KU708004_p17 ERF-like single-stranded DNA-binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 7772 8554
AMW64530.1 KU708004_p70 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 36478 37134
AMW64497.1 KU708004_p37 transcription regulator phrog_5119 unknown function unknown function -1 16496 16933
AMW64476.1 KU708004_p16 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 7151 7768
AMW64466.1 KU708004_p6 transcriptional regulator phrog_2440 transcriptional regulator transcription regulation -1 3343 3561
AMW64541.1 KU708004_p81 tail assembly protein K phrog_30 minor tail protein tail 1 44700 45455
AMW64472.1 KU708004_p12 hypothetical protein phrog_4439 unknown function unknown function -1 5527 5718
AMW64478.1 KU708004_p18 hypothetical protein phrog_1376 unknown function unknown function -1 8562 9719
AMW64474.1 KU708004_p14 hypothetical protein singleton unknown function unknown function 1 6490 6603
AMW64480.1 KU708004_p20 hypothetical protein singleton unknown function unknown function -1 9881 10120
AMW64512.1 KU708004_p52 hypothetical protein singleton unknown function unknown function 1 24524 24691
AMW64523.1 KU708004_p63 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 31532 32620
AMW64464.1 KU708004_p4 hypothetical protein phrog_16138 unknown function unknown function -1 1715 2179
AMW64502.1 KU708004_p42 hypothetical protein singleton unknown function unknown function 1 19105 19227
AMW64533.1 KU708004_p73 tail protein phrog_584 major tail protein tail 1 37814 38470
AMW64546.1 KU708004_p86 hypothetical protein singleton unknown function unknown function -1 47560 47754
AMW64473.1 KU708004_p13 hypothetical protein phrog_5439 unknown function unknown function -1 6003 6491
AMW64550.1 KU708004_p90 tail fiber protein singleton unknown function unknown function 1 52691 53500
AMW64521.1 KU708004_p61 terminase phrog_2 terminase large subunit head and packaging 1 28820 30142
AMW64465.1 KU708004_p5 DNA methyltransferase phrog_67 DNA methyltransferase other -1 2229 3293
AMW64470.1 KU708004_p10 hypothetical protein singleton unknown function unknown function -1 4753 5220
AMW64483.1 KU708004_p23 hypothetical protein phrog_10019 unknown function unknown function -1 10745 10936
AMW64554.1 KU708004_p94 Rz lysis protein phrog_13 Rz-like spanin lysis 1 54563 55060
AMW64536.1 KU708004_p76 tail length tape-measure protein phrog_24 tail length tape measure protein tail 1 39188 42673
AMW64485.1 KU708004_p25 hypothetical protein singleton unknown function unknown function -1 11392 11652
AMW64551.1 KU708004_p91 hypothetical protein phrog_2398 unknown function unknown function 1 53497 53889
AMW64517.1 KU708004_p57 hypothetical protein phrog_13520 unknown function unknown function 1 26953 27225
AMW64489.1 KU708004_p29 hypothetical protein singleton unknown function unknown function -1 12511 12969
AMW64471.1 KU708004_p11 hypothetical protein singleton unknown function unknown function 1 5293 5526
AMW64479.1 KU708004_p19 hypothetical protein singleton unknown function unknown function -1 9765 9884
AMW64524.1 KU708004_p64 hypothetical protein phrog_872 unknown function unknown function 1 32634 33104