| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU708004 |
Definition |
Pseudomonas phage phiAH14a, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
55060 |
Host Name |
Pseudomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
58.13 |
Number of singletons |
25 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AMW64525.1 | KU708004_p65 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 33189 | 33917 |
| AMW64492.1 | KU708004_p32 | tail assembly protein | phrog_32 | tail assembly protein | tail | -1 | 13998 | 14579 |
| AMW64555.1 | KU708004_p95 | Rz1 lysis protein | phrog_3198 | Rz-like spanin | lysis | 1 | 54708 | 55022 |
| AMW64463.1 | KU708004_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1475 | 1678 |
| AMW64510.1 | KU708004_p50 | NinB protein | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 23932 | 24348 |
| AMW64487.1 | KU708004_p27 | hypothetical protein | phrog_2201 | unknown function | unknown function | -1 | 12020 | 12262 |
| AMW64531.1 | KU708004_p71 | hypothetical protein | phrog_9369 | unknown function | unknown function | 1 | 37131 | 37325 |
| AMW64491.1 | KU708004_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13859 | 13975 |
| AMW64468.1 | KU708004_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3931 | 4449 |
| AMW64534.1 | KU708004_p74 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 38474 | 38863 |
| AMW64462.1 | KU708004_p2 | hypothetical protein | phrog_4764 | excisionase | integration and excision | -1 | 1263 | 1457 |
| AMW64526.1 | KU708004_p66 | major capsid protein | phrog_247 | major head protein | head and packaging | 1 | 33930 | 34892 |
| AMW64511.1 | KU708004_p51 | hypothetical protein | phrog_25658 | unknown function | unknown function | 1 | 24348 | 24527 |
| AMW64552.1 | KU708004_p92 | hypothetical protein | phrog_4912 | tail fiber assembly | tail | 1 | 53867 | 54079 |
| AMW64540.1 | KU708004_p80 | hypothetical protein | phrog_3377 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44139 | 44660 |
| AMW64504.1 | KU708004_p44 | ParBc-like nuclease | phrog_4715 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 20094 | 20939 |
| AMW64537.1 | KU708004_p77 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 42677 | 43015 |
| AMW64513.1 | KU708004_p53 | NinG protein | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 24688 | 25332 |
| AMW64519.1 | KU708004_p59 | hypothetical protein | phrog_513 | transposase | integration and excision | 1 | 27714 | 28337 |
| AMW64522.1 | KU708004_p62 | portal protein | phrog_145 | portal protein | head and packaging | 1 | 30139 | 31557 |
| AMW64516.1 | KU708004_p56 | peptidase M48 | phrog_2359 | holin | lysis | 1 | 26628 | 26951 |
| AMW64527.1 | KU708004_p67 | hypothetical protein | phrog_2101 | unknown function | unknown function | 1 | 34918 | 35529 |
| AMW64544.1 | KU708004_p84 | tail assembly protein I | phrog_32 | tail assembly protein | tail | 1 | 46716 | 47309 |
| AMW64475.1 | KU708004_p15 | hypothetical protein | phrog_9129 | unknown function | unknown function | -1 | 6561 | 7154 |
| AMW64543.1 | KU708004_p83 | lipoprotein | phrog_890 | lipoprotein | other | 1 | 46238 | 46660 |
| AMW64508.1 | KU708004_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23055 | 23783 |
| AMW64553.1 | KU708004_p93 | peptidoglycan hydrolase | phrog_938 | endolysin | lysis | 1 | 54138 | 54563 |
| AMW64529.1 | KU708004_p69 | tail attachment protein | phrog_161 | head closure Hc1 | connector | 1 | 36110 | 36481 |
| AMW64528.1 | KU708004_p68 | head-tail connector protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 35589 | 36092 |
| AMW64549.1 | KU708004_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52288 | 52632 |
| AMW64499.1 | KU708004_p39 | transcription repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 17503 | 18264 |
| AMW64539.1 | KU708004_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43851 | 44018 |
| AMW64532.1 | KU708004_p72 | tail terminator protein | phrog_179 | tail terminator | connector | 1 | 37325 | 37741 |
| AMW64486.1 | KU708004_p26 | hypothetical protein | phrog_924 | unknown function | unknown function | -1 | 11672 | 11998 |
| AMW64545.1 | KU708004_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47347 | 47544 |
| AMW64498.1 | KU708004_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16936 | 17250 |
| AMW64514.1 | KU708004_p54 | hypothetical protein | phrog_3412 | unknown function | unknown function | 1 | 25329 | 26015 |
| AMW64548.1 | KU708004_p88 | hypothetical protein | phrog_4047 | unknown function | unknown function | 1 | 51626 | 51952 |
| AMW64535.1 | KU708004_p75 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 38881 | 39177 |
| AMW64515.1 | KU708004_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26084 | 26614 |
| AMW64461.1 | KU708004_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 262 | 1251 |
| AMW64518.1 | KU708004_p58 | proteasome subunit beta | phrog_1040 | peptidase HslV family | other | 1 | 27278 | 27748 |
| AMW64495.1 | KU708004_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15036 | 15452 |
| AMW64520.1 | KU708004_p60 | hypothetical protein | phrog_546 | unknown function | unknown function | 1 | 28369 | 28845 |
| AMW64547.1 | KU708004_p87 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 47934 | 51626 |
| AMW64505.1 | KU708004_p45 | replication protein | phrog_11527 | unknown function | unknown function | 1 | 20941 | 21909 |
| AMW64469.1 | KU708004_p9 | hypothetical protein | phrog_31091 | unknown function | unknown function | -1 | 4446 | 4685 |
| AMW64481.1 | KU708004_p21 | hypothetical protein | phrog_3483 | unknown function | unknown function | -1 | 10117 | 10614 |
| AMW64488.1 | KU708004_p28 | hypothetical protein | phrog_10154 | unknown function | unknown function | -1 | 12291 | 12482 |
| AMW64484.1 | KU708004_p24 | hypothetical protein | phrog_4801 | unknown function | unknown function | -1 | 10933 | 11370 |
| AMW64467.1 | KU708004_p7 | hypothetical protein | phrog_1372 | unknown function | unknown function | -1 | 3558 | 3884 |
| AMW64507.1 | KU708004_p47 | hypothetical protein | phrog_4389 | unknown function | unknown function | 1 | 22678 | 23058 |
| AMW64496.1 | KU708004_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15867 | 16370 |
| AMW64482.1 | KU708004_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 10611 | 10748 |
| AMW64500.1 | KU708004_p40 | Cro-like repressor protein | phrog_35 | transcriptional repressor | transcription regulation | 1 | 18356 | 18565 |
| AMW64503.1 | KU708004_p43 | hypothetical protein | phrog_5931 | unknown function | unknown function | 1 | 19224 | 20057 |
| AMW64490.1 | KU708004_p30 | hypothetical protein | phrog_32948 | unknown function | unknown function | -1 | 13444 | 13803 |
| AMW64494.1 | KU708004_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14923 | 15036 |
| AMW64542.1 | KU708004_p82 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45547 | 46179 |
| AMW64506.1 | KU708004_p46 | hypothetical protein | phrog_6028 | unknown function | unknown function | 1 | 21896 | 22681 |
| AMW64509.1 | KU708004_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23780 | 23935 |
| AMW64538.1 | KU708004_p78 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 43027 | 43779 |
| AMW64493.1 | KU708004_p33 | hypothetical protein | phrog_914 | unknown function | unknown function | -1 | 14637 | 14918 |
| AMW64501.1 | KU708004_p41 | hypothetical protein | phrog_101 | CII-like transcriptional activator | transcription regulation | 1 | 18630 | 19100 |
| AMW64477.1 | KU708004_p17 | ERF-like single-stranded DNA-binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 7772 | 8554 |
| AMW64530.1 | KU708004_p70 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 36478 | 37134 |
| AMW64497.1 | KU708004_p37 | transcription regulator | phrog_5119 | unknown function | unknown function | -1 | 16496 | 16933 |
| AMW64476.1 | KU708004_p16 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 7151 | 7768 |
| AMW64466.1 | KU708004_p6 | transcriptional regulator | phrog_2440 | transcriptional regulator | transcription regulation | -1 | 3343 | 3561 |
| AMW64541.1 | KU708004_p81 | tail assembly protein K | phrog_30 | minor tail protein | tail | 1 | 44700 | 45455 |
| AMW64472.1 | KU708004_p12 | hypothetical protein | phrog_4439 | unknown function | unknown function | -1 | 5527 | 5718 |
| AMW64478.1 | KU708004_p18 | hypothetical protein | phrog_1376 | unknown function | unknown function | -1 | 8562 | 9719 |
| AMW64474.1 | KU708004_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6490 | 6603 |
| AMW64480.1 | KU708004_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9881 | 10120 |
| AMW64512.1 | KU708004_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24524 | 24691 |
| AMW64523.1 | KU708004_p63 | head morphogenesis protein | phrog_241 | head morphogenesis | head and packaging | 1 | 31532 | 32620 |
| AMW64464.1 | KU708004_p4 | hypothetical protein | phrog_16138 | unknown function | unknown function | -1 | 1715 | 2179 |
| AMW64502.1 | KU708004_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19105 | 19227 |
| AMW64533.1 | KU708004_p73 | tail protein | phrog_584 | major tail protein | tail | 1 | 37814 | 38470 |
| AMW64546.1 | KU708004_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47560 | 47754 |
| AMW64473.1 | KU708004_p13 | hypothetical protein | phrog_5439 | unknown function | unknown function | -1 | 6003 | 6491 |
| AMW64550.1 | KU708004_p90 | tail fiber protein | singleton | unknown function | unknown function | 1 | 52691 | 53500 |
| AMW64521.1 | KU708004_p61 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 28820 | 30142 |
| AMW64465.1 | KU708004_p5 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 2229 | 3293 |
| AMW64470.1 | KU708004_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4753 | 5220 |
| AMW64483.1 | KU708004_p23 | hypothetical protein | phrog_10019 | unknown function | unknown function | -1 | 10745 | 10936 |
| AMW64554.1 | KU708004_p94 | Rz lysis protein | phrog_13 | Rz-like spanin | lysis | 1 | 54563 | 55060 |
| AMW64536.1 | KU708004_p76 | tail length tape-measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 39188 | 42673 |
| AMW64485.1 | KU708004_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11392 | 11652 |
| AMW64551.1 | KU708004_p91 | hypothetical protein | phrog_2398 | unknown function | unknown function | 1 | 53497 | 53889 |
| AMW64517.1 | KU708004_p57 | hypothetical protein | phrog_13520 | unknown function | unknown function | 1 | 26953 | 27225 |
| AMW64489.1 | KU708004_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12511 | 12969 |
| AMW64471.1 | KU708004_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5293 | 5526 |
| AMW64479.1 | KU708004_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9765 | 9884 |
| AMW64524.1 | KU708004_p64 | hypothetical protein | phrog_872 | unknown function | unknown function | 1 | 32634 | 33104 |