| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU716094 |
Definition |
Mycobacterium phage Eidsmoe, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; Mycobacterium virus Alma. |
DB of origin |
NUCCORE |
Length |
52946 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
96 |
%GC |
62.53 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AMS00838.1 | KU716094_p37 | hypothetical protein | phrog_2697 | unknown function | unknown function | -1 | 28064 | 28264 |
| AMS00804.1 | KU716094_p3 | hypothetical protein | phrog_10336 | unknown function | unknown function | 1 | 2108 | 2335 |
| AMS00851.1 | KU716094_p50 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 33695 | 35734 |
| AMS00870.1 | KU716094_p69 | hypothetical protein | phrog_9978 | unknown function | unknown function | -1 | 41923 | 42087 |
| AMS00819.1 | KU716094_p18 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 14170 | 14547 |
| AMS00879.1 | KU716094_p78 | hypothetical protein | phrog_3963 | unknown function | unknown function | -1 | 45279 | 45560 |
| AMS00814.1 | KU716094_p13 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9923 | 11410 |
| AMS00806.1 | KU716094_p5 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 2666 | 3139 |
| AMS00877.1 | KU716094_p76 | hypothetical protein | phrog_7865 | unknown function | unknown function | -1 | 44881 | 45051 |
| AMS00873.1 | KU716094_p72 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42623 | 43465 |
| AMS00859.1 | KU716094_p58 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38289 | 38750 |
| AMS00882.1 | KU716094_p81 | DNA methylase | phrog_1008 | DNA methyltransferase | other | -1 | 46043 | 46558 |
| AMS00872.1 | KU716094_p71 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 42374 | 42592 |
| AMS00834.1 | KU716094_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26288 | 26467 |
| AMS00880.1 | KU716094_p79 | hypothetical protein | phrog_8086 | unknown function | unknown function | -1 | 45560 | 45799 |
| AMS00876.1 | KU716094_p75 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 44686 | 44850 |
| AMS00827.1 | KU716094_p26 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 17620 | 20529 |
| AMS00830.1 | KU716094_p29 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21776 | 23569 |
| AMS00856.1 | KU716094_p55 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36975 | 37745 |
| AMS00888.1 | KU716094_p87 | hypothetical protein | phrog_3718 | unknown function | unknown function | -1 | 48607 | 48852 |
| AMS00850.1 | KU716094_p49 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 33168 | 33683 |
| AMS00823.1 | KU716094_p22 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 15492 | 15914 |
| AMS00847.1 | KU716094_p46 | HTH DNA binding protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31847 | 32173 |
| AMS00808.1 | KU716094_p7 | hypothetical protein | phrog_819 | tail protein | tail | 1 | 4189 | 5220 |
| AMS00844.1 | KU716094_p43 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 29484 | 29723 |
| AMS00858.1 | KU716094_p57 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 38017 | 38289 |
| AMS00863.1 | KU716094_p62 | hypothetical protein | phrog_9791 | unknown function | unknown function | -1 | 39703 | 39858 |
| AMS00810.1 | KU716094_p9 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 6036 | 6176 |
| AMS00891.1 | KU716094_p90 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 49371 | 49538 |
| AMS00809.1 | KU716094_p8 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 5224 | 5895 |
| AMS00855.1 | KU716094_p54 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36306 | 36971 |
| AMS00842.1 | KU716094_p41 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 28956 | 29327 |
| AMS00807.1 | KU716094_p6 | minor tail protein | phrog_1260 | minor tail protein | tail | 1 | 3227 | 4189 |
| AMS00889.1 | KU716094_p88 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 48876 | 49229 |
| AMS00843.1 | KU716094_p42 | hypothetical protein | phrog_7968 | unknown function | unknown function | -1 | 29320 | 29484 |
| AMS00884.1 | KU716094_p83 | hypothetical protein | phrog_3256 | unknown function | unknown function | -1 | 47060 | 47425 |
| AMS00822.1 | KU716094_p21 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 15106 | 15495 |
| AMS00895.1 | KU716094_p94 | hypothetical protein | phrog_2499 | unknown function | unknown function | -1 | 50865 | 51068 |
| AMS00854.1 | KU716094_p53 | hypothetical protein | phrog_10515 | unknown function | unknown function | -1 | 36169 | 36309 |
| AMS00805.1 | KU716094_p4 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2332 | 2625 |
| AMS00867.1 | KU716094_p66 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 40562 | 40717 |
| AMS00845.1 | KU716094_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29754 | 31547 |
| AMS00811.1 | KU716094_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 6176 | 7756 |
| AMS00812.1 | KU716094_p11 | holin | phrog_526 | holin | lysis | 1 | 7753 | 8139 |
| AMS00875.1 | KU716094_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 43902 | 44450 |
| AMS00802.1 | KU716094_p1 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 379 | 1158 |
| AMS00840.1 | KU716094_p39 | hypothetical protein | phrog_10689 | unknown function | unknown function | -1 | 28556 | 28768 |
| AMS00874.1 | KU716094_p73 | repressor | phrog_1562 | unknown function | unknown function | -1 | 43462 | 43881 |
| AMS00865.1 | KU716094_p64 | hypothetical protein | phrog_8981 | unknown function | unknown function | -1 | 39989 | 40165 |
| AMS00853.1 | KU716094_p52 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35909 | 36172 |
| AMS00894.1 | KU716094_p93 | hypothetical protein | phrog_1392 | unknown function | unknown function | -1 | 50152 | 50862 |
| AMS00821.1 | KU716094_p20 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 14738 | 15106 |
| AMS00813.1 | KU716094_p12 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 8139 | 9926 |
| AMS00897.1 | KU716094_p96 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 51186 | 51482 |
| AMS00832.1 | KU716094_p31 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 24074 | 24442 |
| AMS00878.1 | KU716094_p77 | hypothetical protein | phrog_5531 | unknown function | unknown function | -1 | 45058 | 45276 |
| AMS00825.1 | KU716094_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 16644 | 17039 |
| AMS00839.1 | KU716094_p38 | hypothetical protein | phrog_10331 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28261 | 28575 |
| AMS00815.1 | KU716094_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 11407 | 12267 |
| AMS00890.1 | KU716094_p89 | hypothetical protein | phrog_10931 | unknown function | unknown function | -1 | 49240 | 49374 |
| AMS00871.1 | KU716094_p70 | helix-turn-helix DNA binding domain protein | phrog_520 | unknown function | unknown function | -1 | 42084 | 42362 |
| AMS00869.1 | KU716094_p68 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41113 | 41922 |
| AMS00852.1 | KU716094_p51 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 35734 | 35937 |
| AMS00881.1 | KU716094_p80 | hypothetical protein | phrog_1342 | unknown function | unknown function | -1 | 45796 | 46023 |
| AMS00817.1 | KU716094_p16 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12878 | 13837 |
| AMS00824.1 | KU716094_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15930 | 16526 |
| AMS00829.1 | KU716094_p28 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 21567 | 21779 |
| AMS00837.1 | KU716094_p36 | dsDNA partitioning protein | phrog_2639 | Arc-like repressor | transcription regulation | 1 | 27651 | 27920 |
| AMS00866.1 | KU716094_p65 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 40162 | 40395 |
| AMS00828.1 | KU716094_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 20557 | 21570 |
| AMS00862.1 | KU716094_p61 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39294 | 39758 |
| AMS00886.1 | KU716094_p85 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 47703 | 48464 |
| AMS00861.1 | KU716094_p60 | hypothetical protein | phrog_18676 | unknown function | unknown function | -1 | 39132 | 39272 |
| AMS00803.1 | KU716094_p2 | hypothetical protein | phrog_5234 | unknown function | unknown function | 1 | 1050 | 2108 |
| AMS00841.1 | KU716094_p40 | hypothetical protein | phrog_9466 | unknown function | unknown function | -1 | 28756 | 28959 |
| AMS00864.1 | KU716094_p63 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 39855 | 40004 |
| AMS00860.1 | KU716094_p59 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38752 | 39135 |
| AMS00892.1 | KU716094_p91 | hypothetical protein | phrog_10771 | unknown function | unknown function | -1 | 49540 | 49911 |
| AMS00883.1 | KU716094_p82 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 46509 | 47063 |
| AMS00831.1 | KU716094_p30 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23623 | 24072 |
| AMS00826.1 | KU716094_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 16644 | 17491 |
| AMS00835.1 | KU716094_p34 | hypothetical protein | phrog_13533 | unknown function | unknown function | 1 | 26588 | 27010 |
| AMS00885.1 | KU716094_p84 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47425 | 47688 |
| AMS00836.1 | KU716094_p35 | dsDNA partitioning protein | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 27077 | 27658 |
| AMS00849.1 | KU716094_p48 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 32384 | 33088 |
| AMS00887.1 | KU716094_p86 | hypothetical protein | phrog_855 | unknown function | unknown function | -1 | 48467 | 48610 |
| AMS00868.1 | KU716094_p67 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 40714 | 41100 |
| AMS00816.1 | KU716094_p15 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 12297 | 12830 |
| AMS00846.1 | KU716094_p45 | hypothetical protein | phrog_4326 | unknown function | unknown function | -1 | 31551 | 31847 |
| AMS00833.1 | KU716094_p32 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 24443 | 26209 |
| AMS00857.1 | KU716094_p56 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 37742 | 38020 |
| AMS00893.1 | KU716094_p92 | hypothetical protein | phrog_3831 | unknown function | unknown function | -1 | 49914 | 50144 |
| AMS00820.1 | KU716094_p19 | head-to-tail connector protein | phrog_830 | head-tail connector protein | connector | 1 | 14544 | 14741 |
| AMS00896.1 | KU716094_p95 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 51072 | 51155 |
| AMS00818.1 | KU716094_p17 | head-to-tail connector protein | phrog_3101 | unknown function | unknown function | 1 | 13943 | 14167 |
| AMS00848.1 | KU716094_p47 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 32170 | 32382 |