Genomic map of Pseudoalteromonas phage vB_PspS-H40/1 (KU747973)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU747973
Definition
Pseudoalteromonas phage vB_PspS-H40/1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
45306
Host Name
Pseudoalteromonas sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
73
%GC
40.14
Number of singletons
15
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANI22024.1 KU747973_p7 hypothetical protein singleton unknown function unknown function 1 7134 7736
ANI22056.1 KU747973_p39 hypothetical protein singleton unknown function unknown function 1 26369 26551
ANI22052.1 KU747973_p35 hypothetical protein singleton unknown function unknown function 1 25059 25415
ANI22046.1 KU747973_p29 cas4-like nuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 18687 19763
ANI22087.1 KU747973_p70 hypothetical protein phrog_791 unknown function unknown function -1 41686 42306
ANI22030.1 KU747973_p13 hypothetical protein phrog_11651 unknown function unknown function 1 9257 9466
ANI22053.1 KU747973_p36 hypothetical protein singleton unknown function unknown function 1 25495 25869
ANI22029.1 KU747973_p12 hypothetical protein phrog_38632 unknown function unknown function -1 8976 9164
ANI22089.1 KU747973_p72 hypothetical protein phrog_384 virion structural protein head and packaging 1 44459 44860
ANI22083.1 KU747973_p66 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 39277 39672
ANI22055.1 KU747973_p38 hypothetical protein phrog_20926 unknown function unknown function 1 26175 26372
ANI22051.1 KU747973_p34 bifunctional DNA primase/polymerase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 22051 24444
ANI22048.1 KU747973_p31 NTPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 20442 21224
ANI22044.1 KU747973_p27 RNaseH-like domain protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 16560 17066
ANI22018.1 KU747973_p1 hypothetical protein phrog_396 minor tail protein tail 1 5 508
ANI22032.1 KU747973_p15 portal protein phrog_146 portal protein head and packaging -1 10536 11930
ANI22023.1 KU747973_p6 hypothetical protein phrog_1141 tail fiber protein tail 1 6689 7132
ANI22078.1 KU747973_p61 hypothetical protein phrog_20960 unknown function unknown function 1 37454 38008
ANI22080.1 KU747973_p63 hypothetical protein singleton unknown function unknown function 1 38386 38556
ANI22057.1 KU747973_p40 terminase small subunit phrog_606 terminase small subunit head and packaging 1 26619 27011
ANI22042.1 KU747973_p25 hypothetical protein phrog_409 transcriptional regulator transcription regulation -1 15984 16151
ANI22026.1 KU747973_p9 hypothetical protein phrog_28598 unknown function unknown function -1 8265 8441
ANI22079.1 KU747973_p62 hypothetical protein phrog_18364 unknown function unknown function 1 38015 38383
ANI22070.1 KU747973_p53 hypothetical protein phrog_31507 unknown function unknown function 1 33812 34351
ANI22081.1 KU747973_p64 hypothetical protein phrog_786 unknown function unknown function 1 38541 38924
ANI22040.1 KU747973_p23 hypothetical protein phrog_35941 unknown function unknown function -1 15560 15784
ANI22059.1 KU747973_p42 hypothetical protein phrog_32526 unknown function unknown function -1 28441 28779
ANI22075.1 KU747973_p58 hypothetical protein phrog_1273 unknown function unknown function -1 36248 36502
ANI22062.1 KU747973_p45 hypothetical protein phrog_17613 ATPase other 1 29435 30181
ANI22085.1 KU747973_p68 hypothetical protein phrog_1407 major tail protein tail 1 40723 41235
ANI22033.1 KU747973_p16 DNA methylase phrog_67 DNA methyltransferase other -1 11987 12922
ANI22088.1 KU747973_p71 tail length tape-measure protein phrog_1538 tail length tape measure protein tail 1 42370 44457
ANI22037.1 KU747973_p20 hypothetical protein singleton unknown function unknown function -1 13870 14031
ANI22058.1 KU747973_p41 terminase large subunit phrog_2 terminase large subunit head and packaging 1 27004 28437
ANI22038.1 KU747973_p21 hypothetical protein phrog_5434 unknown function unknown function -1 14031 14492
ANI22020.1 KU747973_p3 tail protein phrog_469 tail protein tail 1 925 3390
ANI22071.1 KU747973_p54 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 34383 35615
ANI22061.1 KU747973_p44 hypothetical protein phrog_35724 unknown function unknown function 1 29112 29435
ANI22036.1 KU747973_p19 DNA-binding protein phrog_715 MazG-like pyrophosphatase other -1 13435 13857
ANI22049.1 KU747973_p32 hypothetical protein phrog_2480 unknown function unknown function -1 21234 21626
ANI22035.1 KU747973_p18 hypothetical protein phrog_37169 unknown function unknown function -1 13104 13442
ANI22041.1 KU747973_p24 hypothetical protein singleton unknown function unknown function -1 15784 15984
ANI22072.1 KU747973_p55 hypothetical protein singleton unknown function unknown function -1 35671 35844
ANI22060.1 KU747973_p43 hypothetical protein phrog_33658 unknown function unknown function 1 28882 29112
ANI22090.1 KU747973_p73 hypothetical protein phrog_384 virion structural protein head and packaging 1 44860 45306
ANI22082.1 KU747973_p65 hypothetical protein phrog_797 unknown function unknown function 1 38921 39277
ANI22077.1 KU747973_p60 hypothetical protein phrog_924 unknown function unknown function 1 37209 37424
ANI22086.1 KU747973_p69 hypothetical protein singleton unknown function unknown function -1 41225 41641
ANI22050.1 KU747973_p33 transcriptional regulator phrog_35 transcriptional repressor transcription regulation 1 21778 22017
ANI22066.1 KU747973_p49 hypothetical protein phrog_766 head decoration head and packaging 1 31699 32148
ANI22064.1 KU747973_p47 hypothetical protein phrog_4004 unknown function unknown function 1 30328 30504
ANI22065.1 KU747973_p48 coat protein phrog_760 unknown function unknown function 1 30560 31687
ANI22022.1 KU747973_p5 hypothetical protein singleton unknown function unknown function 1 5892 6689
ANI22027.1 KU747973_p10 peptidase phrog_465 endolysin lysis -1 8442 8834
ANI22084.1 KU747973_p67 hypothetical protein phrog_782 unknown function unknown function 1 39669 40118
ANI22021.1 KU747973_p4 hypothetical protein singleton unknown function unknown function 1 3377 5878
ANI22054.1 KU747973_p37 hypothetical protein phrog_2315 unknown function unknown function 1 25871 26173
ANI22076.1 KU747973_p59 hypothetical protein phrog_23168 unknown function unknown function 1 36619 37212
ANI22031.1 KU747973_p14 minor head protein phrog_758 head morphogenesis head and packaging -1 9482 10555
ANI22068.1 KU747973_p51 hypothetical protein singleton unknown function unknown function 1 33241 33435
ANI22047.1 KU747973_p30 hypothetical protein phrog_2300 unknown function unknown function -1 19843 20376
ANI22069.1 KU747973_p52 hypothetical protein phrog_4770 unknown function unknown function 1 33531 33812
ANI22034.1 KU747973_p17 hypothetical protein singleton unknown function unknown function -1 12919 13107
ANI22063.1 KU747973_p46 hypothetical protein phrog_20358 unknown function unknown function 1 30165 30344
ANI22073.1 KU747973_p56 hypothetical protein phrog_14264 unknown function unknown function -1 35846 36037
ANI22045.1 KU747973_p28 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 17066 18700
ANI22074.1 KU747973_p57 hypothetical protein singleton unknown function unknown function -1 36038 36244
ANI22043.1 KU747973_p26 hypothetical protein singleton unknown function unknown function -1 16155 16454
ANI22028.1 KU747973_p11 hypothetical protein phrog_37909 unknown function unknown function -1 8831 8983
ANI22019.1 KU747973_p2 hypothetical protein phrog_329 minor tail protein tail 1 508 921
ANI22067.1 KU747973_p50 coat protein phrog_771 virion structural protein head and packaging 1 32159 33226
ANI22025.1 KU747973_p8 hypothetical protein phrog_9646 unknown function unknown function -1 7748 8230
ANI22039.1 KU747973_p22 DNA-methyltransferase phrog_116 DNA methyltransferase other -1 14496 15563