| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU885990 |
Definition |
Roseobacter phage RD-1410Ws-07, partial genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus; unclassified Baltimorevirus. |
DB of origin |
NUCCORE |
Length |
76298 |
Host Name |
Roseobacter denitrificans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
50 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANJ20845.1 | KU885990_p34 | rIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 24005 | 25429 |
| ANJ20856.1 | KU885990_p45 | hypothetical protein | phrog_6035 | unknown function | unknown function | 1 | 32180 | 32488 |
| ANJ20832.1 | KU885990_p21 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 11247 | 12410 |
| ANJ20855.1 | KU885990_p44 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 30906 | 32183 |
| ANJ20841.1 | KU885990_p30 | hypothetical protein | phrog_18048 | unknown function | unknown function | 1 | 20223 | 20453 |
| ANJ20864.1 | KU885990_p53 | hypothetical protein | phrog_34080 | unknown function | unknown function | 1 | 41124 | 41351 |
| ANJ20826.1 | KU885990_p15 | ATPase | phrog_1297 | ATPase | other | 1 | 6010 | 7155 |
| ANJ20843.1 | KU885990_p32 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 20998 | 21312 |
| ANJ20833.1 | KU885990_p22 | hypothetical protein | phrog_1761 | unknown function | unknown function | 1 | 12403 | 12669 |
| ANJ20863.1 | KU885990_p52 | endoribonuclease RusA | phrog_14238 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40466 | 41134 |
| ANJ20852.1 | KU885990_p41 | hypothetical protein | phrog_14950 | unknown function | unknown function | 1 | 27487 | 27858 |
| ANJ20821.1 | KU885990_p10 | hypothetical protein | phrog_13436 | unknown function | unknown function | 1 | 3461 | 3709 |
| ANJ20828.1 | KU885990_p17 | hypothetical protein | phrog_8231 | unknown function | unknown function | 1 | 8551 | 8823 |
| ANJ20887.1 | KU885990_p76 | hypothetical protein | phrog_36283 | unknown function | unknown function | 1 | 75592 | 75786 |
| ANJ20879.1 | KU885990_p68 | virion protein | phrog_2125 | virion structural protein | head and packaging | -1 | 67573 | 68247 |
| ANJ20854.1 | KU885990_p43 | hypothetical protein | phrog_20171 | unknown function | unknown function | 1 | 30544 | 30918 |
| ANJ20859.1 | KU885990_p48 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 35415 | 36410 |
| ANJ20834.1 | KU885990_p23 | hypothetical protein | phrog_20849 | unknown function | unknown function | 1 | 12672 | 12791 |
| ANJ20829.1 | KU885990_p18 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 8820 | 9311 |
| ANJ20825.1 | KU885990_p14 | hypothetical protein | phrog_12776 | unknown function | unknown function | 1 | 5740 | 5934 |
| ANJ20818.1 | KU885990_p7 | hypothetical protein | phrog_30263 | unknown function | unknown function | 1 | 2530 | 2739 |
| ANJ20886.1 | KU885990_p75 | hypothetical protein | phrog_31338 | unknown function | unknown function | 1 | 75206 | 75580 |
| ANJ20853.1 | KU885990_p42 | class II ribonucleotide reductase | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 27922 | 30288 |
| ANJ20813.1 | KU885990_p2 | hypothetical protein | phrog_28523 | unknown function | unknown function | 1 | 210 | 497 |
| ANJ20815.1 | KU885990_p4 | hypothetical protein | phrog_24522 | unknown function | unknown function | 1 | 789 | 1001 |
| ANJ20861.1 | KU885990_p50 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 38608 | 39342 |
| ANJ20851.1 | KU885990_p40 | hypothetical protein | phrog_22316 | unknown function | unknown function | 1 | 27289 | 27438 |
| ANJ20820.1 | KU885990_p9 | hypothetical protein | phrog_33435 | unknown function | unknown function | 1 | 3224 | 3448 |
| ANJ20846.1 | KU885990_p35 | HNH endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 25505 | 25834 |
| ANJ20819.1 | KU885990_p8 | hypothetical protein | phrog_27133 | unknown function | unknown function | 1 | 2736 | 3113 |
| ANJ20822.1 | KU885990_p11 | hypothetical protein | phrog_38145 | unknown function | unknown function | 1 | 3723 | 4298 |
| ANJ20866.1 | KU885990_p55 | hypothetical protein | phrog_14527 | unknown function | unknown function | -1 | 52450 | 54339 |
| ANJ20860.1 | KU885990_p49 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 36403 | 38598 |
| ANJ20837.1 | KU885990_p26 | hypothetical protein | phrog_4368 | unknown function | unknown function | 1 | 13753 | 14259 |
| ANJ20847.1 | KU885990_p36 | hypothetical protein | phrog_38531 | unknown function | unknown function | 1 | 26291 | 26455 |
| ANJ20871.1 | KU885990_p60 | major capsid protein | phrog_1357 | major head protein | head and packaging | -1 | 59800 | 61245 |
| ANJ20877.1 | KU885990_p66 | hypothetical protein | phrog_16098 | unknown function | unknown function | -1 | 66615 | 67073 |
| ANJ20812.1 | KU885990_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1 | 98 |
| ANJ20838.1 | KU885990_p27 | virion protein | phrog_33012 | unknown function | unknown function | 1 | 14275 | 18369 |
| ANJ20824.1 | KU885990_p13 | RNAP2 protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4479 | 5675 |
| ANJ20842.1 | KU885990_p31 | nucleoside triphosphate pyrophosphohydrolase | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 20466 | 21008 |
| ANJ20874.1 | KU885990_p63 | virion protein | phrog_1216 | portal protein | head and packaging | -1 | 63150 | 65450 |
| ANJ20868.1 | KU885990_p57 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 54817 | 57567 |
| ANJ20883.1 | KU885990_p72 | structural protein | phrog_12736 | virion structural protein | head and packaging | 1 | 70953 | 73292 |
| ANJ20884.1 | KU885990_p73 | virion protein | phrog_6368 | unknown function | unknown function | 1 | 73318 | 74298 |
| ANJ20885.1 | KU885990_p74 | hypothetical protein | phrog_6047 | unknown function | unknown function | 1 | 74630 | 75133 |
| ANJ20872.1 | KU885990_p61 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 61280 | 62656 |
| ANJ20867.1 | KU885990_p56 | virion protein | phrog_2646 | unknown function | unknown function | -1 | 54350 | 54814 |
| ANJ20876.1 | KU885990_p65 | hypothetical protein | phrog_5867 | endolysin | lysis | -1 | 65959 | 66615 |
| ANJ20839.1 | KU885990_p28 | hypothetical protein | phrog_33713 | unknown function | unknown function | 1 | 18366 | 19256 |
| ANJ20836.1 | KU885990_p25 | hypothetical protein | phrog_4368 | unknown function | unknown function | 1 | 13251 | 13751 |
| ANJ20814.1 | KU885990_p3 | hypothetical protein | phrog_33868 | unknown function | unknown function | 1 | 499 | 699 |
| ANJ20875.1 | KU885990_p64 | hypothetical protein | phrog_18816 | unknown function | unknown function | -1 | 65627 | 65962 |
| ANJ20827.1 | KU885990_p16 | metallopeptidase domain containing protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7236 | 8549 |
| ANJ20862.1 | KU885990_p51 | single-stranded DNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39345 | 40211 |
| ANJ20844.1 | KU885990_p33 | rIIA-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 21397 | 23985 |
| ANJ20835.1 | KU885990_p24 | virion protein | phrog_1627 | unknown function | unknown function | 1 | 12931 | 13254 |
| ANJ20830.1 | KU885990_p19 | hypothetical protein | phrog_16467 | unknown function | unknown function | 1 | 9304 | 9768 |
| ANJ20823.1 | KU885990_p12 | hypothetical protein | phrog_14069 | unknown function | unknown function | 1 | 4285 | 4485 |
| ANJ20873.1 | KU885990_p62 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 62704 | 63096 |
| ANJ20840.1 | KU885990_p29 | hypothetical protein | phrog_6368 | unknown function | unknown function | 1 | 19258 | 20226 |
| ANJ20865.1 | KU885990_p54 | vRNAP protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 41348 | 52387 |
| ANJ20848.1 | KU885990_p37 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 26433 | 26849 |
| ANJ20870.1 | KU885990_p59 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 58960 | 59685 |
| ANJ20816.1 | KU885990_p5 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 1153 | 1539 |
| ANJ20869.1 | KU885990_p58 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 57578 | 58924 |
| ANJ20880.1 | KU885990_p69 | terminase subunit A | phrog_38 | terminase large subunit | head and packaging | -1 | 68258 | 69868 |
| ANJ20858.1 | KU885990_p47 | DNA polymerase family A | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 32803 | 35418 |
| ANJ20878.1 | KU885990_p67 | hypothetical protein | phrog_13075 | unknown function | unknown function | -1 | 67178 | 67573 |
| ANJ20831.1 | KU885990_p20 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 9765 | 11183 |
| ANJ20850.1 | KU885990_p39 | hypothetical protein | phrog_37656 | unknown function | unknown function | 1 | 27143 | 27292 |
| ANJ20817.1 | KU885990_p6 | RNAP1 protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1745 | 2533 |
| ANJ20881.1 | KU885990_p70 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 69861 | 70553 |
| ANJ20882.1 | KU885990_p71 | virion protein | phrog_13099 | virion structural protein | head and packaging | 1 | 70627 | 70953 |
| ANJ20849.1 | KU885990_p38 | hypothetical protein | phrog_34406 | unknown function | unknown function | 1 | 26853 | 27146 |
| ANJ20857.1 | KU885990_p46 | hypothetical protein | phrog_4848 | unknown function | unknown function | 1 | 32469 | 32798 |