Genomic map of Roseobacter phage RD-1410Ws-07 (KU885990)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU885990
Definition
Roseobacter phage RD-1410Ws-07, partial genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus; unclassified Baltimorevirus.
DB of origin
NUCCORE
Length
76298
Host Name
Roseobacter denitrificans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
50
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANJ20845.1 KU885990_p34 rIIB-like protein phrog_2886 RIIB lysis inhibitor lysis 1 24005 25429
ANJ20856.1 KU885990_p45 hypothetical protein phrog_6035 unknown function unknown function 1 32180 32488
ANJ20832.1 KU885990_p21 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 11247 12410
ANJ20855.1 KU885990_p44 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 30906 32183
ANJ20841.1 KU885990_p30 hypothetical protein phrog_18048 unknown function unknown function 1 20223 20453
ANJ20864.1 KU885990_p53 hypothetical protein phrog_34080 unknown function unknown function 1 41124 41351
ANJ20826.1 KU885990_p15 ATPase phrog_1297 ATPase other 1 6010 7155
ANJ20843.1 KU885990_p32 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 20998 21312
ANJ20833.1 KU885990_p22 hypothetical protein phrog_1761 unknown function unknown function 1 12403 12669
ANJ20863.1 KU885990_p52 endoribonuclease RusA phrog_14238 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 40466 41134
ANJ20852.1 KU885990_p41 hypothetical protein phrog_14950 unknown function unknown function 1 27487 27858
ANJ20821.1 KU885990_p10 hypothetical protein phrog_13436 unknown function unknown function 1 3461 3709
ANJ20828.1 KU885990_p17 hypothetical protein phrog_8231 unknown function unknown function 1 8551 8823
ANJ20887.1 KU885990_p76 hypothetical protein phrog_36283 unknown function unknown function 1 75592 75786
ANJ20879.1 KU885990_p68 virion protein phrog_2125 virion structural protein head and packaging -1 67573 68247
ANJ20854.1 KU885990_p43 hypothetical protein phrog_20171 unknown function unknown function 1 30544 30918
ANJ20859.1 KU885990_p48 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 35415 36410
ANJ20834.1 KU885990_p23 hypothetical protein phrog_20849 unknown function unknown function 1 12672 12791
ANJ20829.1 KU885990_p18 deoxycytidine triphosphate deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 8820 9311
ANJ20825.1 KU885990_p14 hypothetical protein phrog_12776 unknown function unknown function 1 5740 5934
ANJ20818.1 KU885990_p7 hypothetical protein phrog_30263 unknown function unknown function 1 2530 2739
ANJ20886.1 KU885990_p75 hypothetical protein phrog_31338 unknown function unknown function 1 75206 75580
ANJ20853.1 KU885990_p42 class II ribonucleotide reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 27922 30288
ANJ20813.1 KU885990_p2 hypothetical protein phrog_28523 unknown function unknown function 1 210 497
ANJ20815.1 KU885990_p4 hypothetical protein phrog_24522 unknown function unknown function 1 789 1001
ANJ20861.1 KU885990_p50 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 38608 39342
ANJ20851.1 KU885990_p40 hypothetical protein phrog_22316 unknown function unknown function 1 27289 27438
ANJ20820.1 KU885990_p9 hypothetical protein phrog_33435 unknown function unknown function 1 3224 3448
ANJ20846.1 KU885990_p35 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 25505 25834
ANJ20819.1 KU885990_p8 hypothetical protein phrog_27133 unknown function unknown function 1 2736 3113
ANJ20822.1 KU885990_p11 hypothetical protein phrog_38145 unknown function unknown function 1 3723 4298
ANJ20866.1 KU885990_p55 hypothetical protein phrog_14527 unknown function unknown function -1 52450 54339
ANJ20860.1 KU885990_p49 DNA primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 36403 38598
ANJ20837.1 KU885990_p26 hypothetical protein phrog_4368 unknown function unknown function 1 13753 14259
ANJ20847.1 KU885990_p36 hypothetical protein phrog_38531 unknown function unknown function 1 26291 26455
ANJ20871.1 KU885990_p60 major capsid protein phrog_1357 major head protein head and packaging -1 59800 61245
ANJ20877.1 KU885990_p66 hypothetical protein phrog_16098 unknown function unknown function -1 66615 67073
ANJ20812.1 KU885990_p1 hypothetical protein singleton unknown function unknown function 1 1 98
ANJ20838.1 KU885990_p27 virion protein phrog_33012 unknown function unknown function 1 14275 18369
ANJ20824.1 KU885990_p13 RNAP2 protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 4479 5675
ANJ20842.1 KU885990_p31 nucleoside triphosphate pyrophosphohydrolase phrog_671 nucleotide pyrophosphohydrolase other 1 20466 21008
ANJ20874.1 KU885990_p63 virion protein phrog_1216 portal protein head and packaging -1 63150 65450
ANJ20868.1 KU885990_p57 hypothetical protein phrog_2220 unknown function unknown function -1 54817 57567
ANJ20883.1 KU885990_p72 structural protein phrog_12736 virion structural protein head and packaging 1 70953 73292
ANJ20884.1 KU885990_p73 virion protein phrog_6368 unknown function unknown function 1 73318 74298
ANJ20885.1 KU885990_p74 hypothetical protein phrog_6047 unknown function unknown function 1 74630 75133
ANJ20872.1 KU885990_p61 hypothetical protein phrog_2120 tail length tape measure protein tail -1 61280 62656
ANJ20867.1 KU885990_p56 virion protein phrog_2646 unknown function unknown function -1 54350 54814
ANJ20876.1 KU885990_p65 hypothetical protein phrog_5867 endolysin lysis -1 65959 66615
ANJ20839.1 KU885990_p28 hypothetical protein phrog_33713 unknown function unknown function 1 18366 19256
ANJ20836.1 KU885990_p25 hypothetical protein phrog_4368 unknown function unknown function 1 13251 13751
ANJ20814.1 KU885990_p3 hypothetical protein phrog_33868 unknown function unknown function 1 499 699
ANJ20875.1 KU885990_p64 hypothetical protein phrog_18816 unknown function unknown function -1 65627 65962
ANJ20827.1 KU885990_p16 metallopeptidase domain containing protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7236 8549
ANJ20862.1 KU885990_p51 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 39345 40211
ANJ20844.1 KU885990_p33 rIIA-like protein phrog_2979 RIIA lysis inhibitor lysis 1 21397 23985
ANJ20835.1 KU885990_p24 virion protein phrog_1627 unknown function unknown function 1 12931 13254
ANJ20830.1 KU885990_p19 hypothetical protein phrog_16467 unknown function unknown function 1 9304 9768
ANJ20823.1 KU885990_p12 hypothetical protein phrog_14069 unknown function unknown function 1 4285 4485
ANJ20873.1 KU885990_p62 hypothetical protein phrog_2346 unknown function unknown function -1 62704 63096
ANJ20840.1 KU885990_p29 hypothetical protein phrog_6368 unknown function unknown function 1 19258 20226
ANJ20865.1 KU885990_p54 vRNAP protein phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 41348 52387
ANJ20848.1 KU885990_p37 hypothetical protein phrog_2072 unknown function unknown function 1 26433 26849
ANJ20870.1 KU885990_p59 hypothetical protein phrog_2130 unknown function unknown function -1 58960 59685
ANJ20816.1 KU885990_p5 hypothetical protein phrog_4099 unknown function unknown function 1 1153 1539
ANJ20869.1 KU885990_p58 hypothetical protein phrog_2050 virion structural protein head and packaging -1 57578 58924
ANJ20880.1 KU885990_p69 terminase subunit A phrog_38 terminase large subunit head and packaging -1 68258 69868
ANJ20858.1 KU885990_p47 DNA polymerase family A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 32803 35418
ANJ20878.1 KU885990_p67 hypothetical protein phrog_13075 unknown function unknown function -1 67178 67573
ANJ20831.1 KU885990_p20 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 9765 11183
ANJ20850.1 KU885990_p39 hypothetical protein phrog_37656 unknown function unknown function 1 27143 27292
ANJ20817.1 KU885990_p6 RNAP1 protein phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 1745 2533
ANJ20881.1 KU885990_p70 hypothetical protein phrog_2109 unknown function unknown function -1 69861 70553
ANJ20882.1 KU885990_p71 virion protein phrog_13099 virion structural protein head and packaging 1 70627 70953
ANJ20849.1 KU885990_p38 hypothetical protein phrog_34406 unknown function unknown function 1 26853 27146
ANJ20857.1 KU885990_p46 hypothetical protein phrog_4848 unknown function unknown function 1 32469 32798