Genomic map of Freshwater phage uvFW-CGR-AMD-COM-C203 (KU886268)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU886268
Definition
Freshwater phage uvFW-CGR-AMD-COM-C203, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
61371
Host Name
Actinobacteria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
88
%GC
44.68
Number of singletons
46
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANH49231.1 KU886268_p55 tail assembly chaperone phrog_344 tail assembly chaperone tail 1 38064 38423
ANH49233.1 KU886268_p57 hypothetical protein singleton unknown function unknown function 1 42044 43615
ANH49205.1 KU886268_p29 hypothetical protein phrog_673 head scaffolding protein head and packaging 1 24409 24798
ANH49184.1 KU886268_p8 hypothetical protein phrog_15500 unknown function unknown function 1 5052 5915
ANH49227.1 KU886268_p51 hypothetical protein phrog_474 phosphofructokinase other 1 36135 36392
ANH49234.1 KU886268_p58 hypothetical protein singleton unknown function unknown function 1 43615 44040
ANH49255.1 KU886268_p79 hypothetical protein singleton unknown function unknown function -1 56741 56893
ANH49226.1 KU886268_p50 metallo-dependent phosphatase-like domain containing protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 34864 36114
ANH49179.1 KU886268_p3 hypothetical protein singleton unknown function unknown function -1 1105 1419
ANH49185.1 KU886268_p9 hypothetical protein phrog_4776 unknown function unknown function 1 5915 6598
ANH49219.1 KU886268_p43 membrane protein singleton unknown function unknown function 1 32475 32681
ANH49192.1 KU886268_p16 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 9191 9568
ANH49191.1 KU886268_p15 hypothetical protein singleton unknown function unknown function 1 8810 9079
ANH49228.1 KU886268_p52 hypothetical protein phrog_7924 unknown function unknown function 1 36516 36863
ANH49242.1 KU886268_p66 hypothetical protein singleton unknown function unknown function 1 47819 48178
ANH49207.1 KU886268_p31 hypothetical protein singleton unknown function unknown function 1 25847 26245
ANH49238.1 KU886268_p62 endopeptidase phrog_21357 endolysin lysis 1 45734 46258
ANH49210.1 KU886268_p34 hypothetical protein singleton unknown function unknown function 1 26736 27281
ANH49250.1 KU886268_p74 ParB-like nuclease domain containing protein phrog_8071 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 52394 53578
ANH49194.1 KU886268_p18 hypothetical protein singleton unknown function unknown function 1 10210 10509
ANH49235.1 KU886268_p59 DUF5047 domain containing protein phrog_1887 tail protein tail 1 44040 45158
ANH49225.1 KU886268_p49 hypothetical protein singleton unknown function unknown function -1 34718 34849
ANH49253.1 KU886268_p77 hypothetical protein phrog_13596 unknown function unknown function 1 55812 56192
ANH49198.1 KU886268_p22 hypothetical protein singleton unknown function unknown function 1 17033 19627
ANH49263.1 KU886268_p87 hypothetical protein singleton unknown function unknown function -1 60705 60866
ANH49246.1 KU886268_p70 hypothetical protein singleton unknown function unknown function 1 50167 50373
ANH49239.1 KU886268_p63 hypothetical protein singleton unknown function unknown function 1 46261 46545
ANH49245.1 KU886268_p69 crossover junction endodeoxyribonuclease phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 49760 50170
ANH49203.1 KU886268_p27 hypothetical protein singleton unknown function unknown function 1 23232 23495
ANH49218.1 KU886268_p42 adenylyl-sulfate kinase phrog_10255 kinase other 1 31654 32409
ANH49261.1 KU886268_p85 nucleophile aminohydrolase phrog_1040 peptidase HslV family other -1 58935 59495
ANH49177.1 KU886268_p1 bacterial transcriptional activator domain PF03704 containing protein singleton unknown function unknown function -1 2 364
ANH49230.1 KU886268_p54 major tail protein phrog_10528 major tail protein tail 1 37588 38004
ANH49202.1 KU886268_p26 hypothetical protein singleton unknown function unknown function 1 22775 23002
ANH49249.1 KU886268_p73 S-adenosyl-L-methionine-dependent methyltransferase phrog_4752 tRNA methyltransferase other 1 51747 52397
ANH49196.1 KU886268_p20 head morphogenesis protein phrog_3517 head morphogenesis head and packaging 1 12127 13134
ANH49241.1 KU886268_p65 DNA single strand annealing protein Erf phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 47146 47826
ANH49258.1 KU886268_p82 high potential iron-sulfur protein singleton unknown function unknown function 1 58094 58513
ANH49240.1 KU886268_p64 host-nuclease inhibitor protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 46601 47134
ANH49214.1 KU886268_p38 hypothetical protein singleton unknown function unknown function 1 28490 29467
ANH49254.1 KU886268_p78 hypothetical protein singleton unknown function unknown function -1 56348 56740
ANH49193.1 KU886268_p17 primosome PriB/single-strand DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9719 10162
ANH49187.1 KU886268_p11 hypothetical protein singleton unknown function unknown function 1 7065 7322
ANH49232.1 KU886268_p56 tail tape measure protein phrog_305 tail length tape measure protein tail 1 38601 42044
ANH49199.1 KU886268_p23 hypothetical protein singleton unknown function unknown function 1 19680 19778
ANH49212.1 KU886268_p36 hypothetical protein singleton unknown function unknown function 1 27480 28157
ANH49229.1 KU886268_p53 major tail protein 2 phrog_9522 major tail protein tail 1 36863 37588
ANH49262.1 KU886268_p86 hypothetical protein singleton unknown function unknown function -1 60472 60648
ANH49183.1 KU886268_p7 hypothetical protein singleton unknown function unknown function -1 2876 4966
ANH49244.1 KU886268_p68 HNH domain containing protein phrog_14515 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49502 49756
ANH49236.1 KU886268_p60 hypothetical protein singleton unknown function unknown function 1 45158 45403
ANH49195.1 KU886268_p19 portal protein phrog_113 portal protein head and packaging 1 10709 12124
ANH49206.1 KU886268_p30 major capsid protein E phrog_1005 major head protein head and packaging 1 24812 25789
ANH49224.1 KU886268_p48 hypothetical protein phrog_2595 head-tail connector protein connector 1 34107 34508
ANH49200.1 KU886268_p24 major capsid protein phrog_2859 unknown function unknown function 1 19810 22089
ANH49252.1 KU886268_p76 terminase large subunit phrog_2 terminase large subunit head and packaging 1 54226 55824
ANH49208.1 KU886268_p32 hypothetical protein singleton unknown function unknown function 1 26245 26406
ANH49247.1 KU886268_p71 RNA polymerase sigma factor singleton unknown function unknown function 1 50370 50669
ANH49220.1 KU886268_p44 hypothetical protein singleton unknown function unknown function 1 32704 32916
ANH49223.1 KU886268_p47 minor capsid protein phrog_5 tail completion or Neck1 protein connector 1 33703 34107
ANH49243.1 KU886268_p67 hypothetical protein singleton unknown function unknown function 1 48830 49270
ANH49216.1 KU886268_p40 hypothetical protein phrog_7759 unknown function unknown function 1 30458 30796
ANH49178.1 KU886268_p2 hypothetical protein singleton unknown function unknown function -1 364 699
ANH49189.1 KU886268_p13 hypothetical protein singleton unknown function unknown function 1 7491 7904
ANH49211.1 KU886268_p35 hypothetical protein singleton unknown function unknown function 1 27283 27480
ANH49222.1 KU886268_p46 hypothetical protein singleton unknown function unknown function 1 33371 33700
ANH49257.1 KU886268_p81 hypothetical protein singleton unknown function unknown function -1 57285 57497
ANH49256.1 KU886268_p80 hypothetical protein phrog_21047 unknown function unknown function -1 56893 57285
ANH49221.1 KU886268_p45 hypothetical protein phrog_1732 unknown function unknown function 1 32916 33362
ANH49248.1 KU886268_p72 C-5 cytosine-specific DNA methylase phrog_116 DNA methyltransferase other 1 50669 51760
ANH49197.1 KU886268_p21 hypothetical protein singleton unknown function unknown function 1 15375 16277
ANH49186.1 KU886268_p10 hypothetical protein singleton unknown function unknown function 1 6726 6875
ANH49201.1 KU886268_p25 serine protease phrog_1530 DNA methyltransferase other 1 22068 22778
ANH49264.1 KU886268_p88 hypothetical protein singleton unknown function unknown function -1 60871 61107
ANH49237.1 KU886268_p61 hypothetical protein singleton unknown function unknown function 1 45453 45734
ANH49180.1 KU886268_p4 hypothetical protein singleton unknown function unknown function 1 1953 2474
ANH49190.1 KU886268_p14 hypothetical protein phrog_15428 unknown function unknown function 1 8348 8800
ANH49188.1 KU886268_p12 hypothetical protein singleton unknown function unknown function 1 7323 7490
ANH49209.1 KU886268_p33 hypothetical protein singleton unknown function unknown function 1 26461 26733
ANH49215.1 KU886268_p39 eggshell protein signature containing protein phrog_2295 unknown function unknown function 1 29483 30445
ANH49181.1 KU886268_p5 hypothetical protein phrog_26427 nuclease DNA, RNA and nucleotide metabolism 1 2501 2764
ANH49213.1 KU886268_p37 hypothetical protein phrog_1276 unknown function unknown function 1 28161 28490
ANH49259.1 KU886268_p83 hypothetical protein singleton unknown function unknown function 1 58576 58707
ANH49260.1 KU886268_p84 hypothetical protein singleton unknown function unknown function -1 58702 58884
ANH49217.1 KU886268_p41 P-loop containing nucleoside triphosphate hydrolase phrog_27463 unknown function unknown function 1 30818 31657
ANH49251.1 KU886268_p75 DNA binding protein phrog_4102 terminase small subunit head and packaging 1 53711 54223
ANH49204.1 KU886268_p28 hypothetical protein phrog_13547 unknown function unknown function 1 23620 24405
ANH49182.1 KU886268_p6 hypothetical protein singleton unknown function unknown function -1 2709 2837