| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU886269 |
Definition |
Freshwater phage uvFW-CGR-AMD-COM-C403, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
42180 |
Host Name |
Actinobacteria |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
45.84 |
Number of singletons |
25 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANH49270.1 | KU886269_p6 | hypothetical protein | phrog_2295 | unknown function | unknown function | -1 | 2212 | 3261 |
| ANH49276.1 | KU886269_p12 | hypothetical protein | phrog_7595 | unknown function | unknown function | -1 | 6880 | 7155 |
| ANH49274.1 | KU886269_p10 | hypothetical protein | phrog_10483 | unknown function | unknown function | -1 | 6397 | 6651 |
| ANH49273.1 | KU886269_p9 | hypothetical protein | phrog_7578 | unknown function | unknown function | -1 | 5498 | 6397 |
| ANH49271.1 | KU886269_p7 | hypothetical protein | phrog_1276 | unknown function | unknown function | -1 | 3263 | 3568 |
| ANH49320.1 | KU886269_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38385 | 38507 |
| ANH49279.1 | KU886269_p15 | DNA binding protein | singleton | unknown function | unknown function | -1 | 7505 | 7714 |
| ANH49316.1 | KU886269_p52 | hypothetical protein | phrog_13596 | unknown function | unknown function | -1 | 36052 | 36444 |
| ANH49322.1 | KU886269_p58 | hypothetical protein | phrog_32486 | unknown function | unknown function | -1 | 41296 | 41802 |
| ANH49305.1 | KU886269_p41 | RNA-binding protein | singleton | unknown function | unknown function | 1 | 30559 | 30891 |
| ANH49318.1 | KU886269_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37268 | 37717 |
| ANH49307.1 | KU886269_p43 | FmdB family regulatory protein | phrog_1076 | FmdB-like transcriptional regulator | transcription regulation | -1 | 31820 | 31993 |
| ANH49289.1 | KU886269_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20643 | 20792 |
| ANH49292.1 | KU886269_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24948 | 25214 |
| ANH49275.1 | KU886269_p11 | hypothetical protein | phrog_8987 | unknown function | unknown function | -1 | 6626 | 6880 |
| ANH49282.1 | KU886269_p18 | hypothetical protein | phrog_8424 | unknown function | unknown function | -1 | 9368 | 11395 |
| ANH49306.1 | KU886269_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30888 | 31031 |
| ANH49278.1 | KU886269_p14 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7372 | 7515 |
| ANH49290.1 | KU886269_p26 | head to tail connecting protein | phrog_104 | portal protein | head and packaging | -1 | 20807 | 22564 |
| ANH49266.1 | KU886269_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 331 | 1281 |
| ANH49302.1 | KU886269_p38 | hypothetical protein | phrog_1221 | unknown function | unknown function | 1 | 29004 | 29978 |
| ANH49283.1 | KU886269_p19 | LysM domain containing protein | singleton | unknown function | unknown function | -1 | 11399 | 12796 |
| ANH49317.1 | KU886269_p53 | P-loop containing nucleoside triphosphate hydrolase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 36435 | 37268 |
| ANH49280.1 | KU886269_p16 | major capsid protein | phrog_1357 | major head protein | head and packaging | -1 | 7763 | 8740 |
| ANH49314.1 | KU886269_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35497 | 35622 |
| ANH49301.1 | KU886269_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28701 | 28961 |
| ANH49323.1 | KU886269_p59 | shock protein B-like protein | phrog_9869 | unknown function | unknown function | -1 | 41806 | 42000 |
| ANH49308.1 | KU886269_p44 | RNA polymerase sigma factor | phrog_354 | sigma-K factor | transcription regulation | -1 | 31993 | 32631 |
| ANH49304.1 | KU886269_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30204 | 30431 |
| ANH49291.1 | KU886269_p27 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | -1 | 22569 | 24458 |
| ANH49295.1 | KU886269_p31 | host recBCD nuclease inhibitor | singleton | unknown function | unknown function | 1 | 25917 | 26234 |
| ANH49277.1 | KU886269_p13 | hypothetical protein | phrog_34011 | unknown function | unknown function | -1 | 7156 | 7314 |
| ANH49321.1 | KU886269_p57 | peptidoglycan binding protein | singleton | unknown function | unknown function | -1 | 39151 | 39369 |
| ANH49298.1 | KU886269_p34 | hypothetical protein | phrog_1392 | unknown function | unknown function | 1 | 26925 | 27650 |
| ANH49313.1 | KU886269_p49 | tRNA endonuclease-like domain containing protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 35144 | 35497 |
| ANH49309.1 | KU886269_p45 | recombination endonuclease VII | phrog_2914 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 32624 | 32911 |
| ANH49281.1 | KU886269_p17 | DNA binding protein | phrog_7813 | unknown function | unknown function | -1 | 8774 | 9223 |
| ANH49293.1 | KU886269_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25562 | 25735 |
| ANH49284.1 | KU886269_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12796 | 13620 |
| ANH49287.1 | KU886269_p23 | hypothetical protein | phrog_8200 | unknown function | unknown function | -1 | 18728 | 19123 |
| ANH49303.1 | KU886269_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29981 | 30211 |
| ANH49311.1 | KU886269_p47 | zinc finger domain containing protein | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 34392 | 34724 |
| ANH49300.1 | KU886269_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28244 | 28690 |
| ANH49296.1 | KU886269_p32 | hypothetical protein | phrog_31860 | unknown function | unknown function | 1 | 26237 | 26596 |
| ANH49268.1 | KU886269_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1616 | 1834 |
| ANH49297.1 | KU886269_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26589 | 26861 |
| ANH49265.1 | KU886269_p1 | hypothetical protein | phrog_14370 | unknown function | unknown function | -1 | 104 | 322 |
| ANH49267.1 | KU886269_p3 | hypothetical protein | phrog_1276 | unknown function | unknown function | -1 | 1283 | 1612 |
| ANH49288.1 | KU886269_p24 | LysM domain containing protein | singleton | unknown function | unknown function | -1 | 19132 | 20634 |
| ANH49312.1 | KU886269_p48 | lysozyme-like protein | phrog_35836 | transglycosylase | other | -1 | 34728 | 35087 |
| ANH49310.1 | KU886269_p46 | hypothetical protein | phrog_1485 | unknown function | unknown function | -1 | 32892 | 33209 |
| ANH49269.1 | KU886269_p5 | hypothetical protein | phrog_7759 | unknown function | unknown function | -1 | 1827 | 2201 |
| ANH49286.1 | KU886269_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18552 | 18731 |
| ANH49299.1 | KU886269_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27647 | 27994 |
| ANH49272.1 | KU886269_p8 | tail fiber protein | phrog_38058 | tail fiber protein | tail | -1 | 3584 | 5494 |
| ANH49319.1 | KU886269_p55 | PD-(D/E)XK nuclease superfamily protein | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 37730 | 38398 |
| ANH49285.1 | KU886269_p21 | hypothetical protein | phrog_10618 | unknown function | unknown function | -1 | 13634 | 18571 |
| ANH49315.1 | KU886269_p51 | transcription factor WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | -1 | 35619 | 35888 |
| ANH49294.1 | KU886269_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25750 | 25917 |