Genomic map of Freshwater phage uvFW-CGR-AMD-COM-C403 (KU886269)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU886269
Definition
Freshwater phage uvFW-CGR-AMD-COM-C403, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
42180
Host Name
Actinobacteria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
45.84
Number of singletons
25
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANH49270.1 KU886269_p6 hypothetical protein phrog_2295 unknown function unknown function -1 2212 3261
ANH49276.1 KU886269_p12 hypothetical protein phrog_7595 unknown function unknown function -1 6880 7155
ANH49274.1 KU886269_p10 hypothetical protein phrog_10483 unknown function unknown function -1 6397 6651
ANH49273.1 KU886269_p9 hypothetical protein phrog_7578 unknown function unknown function -1 5498 6397
ANH49271.1 KU886269_p7 hypothetical protein phrog_1276 unknown function unknown function -1 3263 3568
ANH49320.1 KU886269_p56 hypothetical protein singleton unknown function unknown function -1 38385 38507
ANH49279.1 KU886269_p15 DNA binding protein singleton unknown function unknown function -1 7505 7714
ANH49316.1 KU886269_p52 hypothetical protein phrog_13596 unknown function unknown function -1 36052 36444
ANH49322.1 KU886269_p58 hypothetical protein phrog_32486 unknown function unknown function -1 41296 41802
ANH49305.1 KU886269_p41 RNA-binding protein singleton unknown function unknown function 1 30559 30891
ANH49318.1 KU886269_p54 hypothetical protein singleton unknown function unknown function -1 37268 37717
ANH49307.1 KU886269_p43 FmdB family regulatory protein phrog_1076 FmdB-like transcriptional regulator transcription regulation -1 31820 31993
ANH49289.1 KU886269_p25 hypothetical protein singleton unknown function unknown function -1 20643 20792
ANH49292.1 KU886269_p28 hypothetical protein singleton unknown function unknown function -1 24948 25214
ANH49275.1 KU886269_p11 hypothetical protein phrog_8987 unknown function unknown function -1 6626 6880
ANH49282.1 KU886269_p18 hypothetical protein phrog_8424 unknown function unknown function -1 9368 11395
ANH49306.1 KU886269_p42 hypothetical protein singleton unknown function unknown function 1 30888 31031
ANH49278.1 KU886269_p14 hypothetical protein singleton unknown function unknown function -1 7372 7515
ANH49290.1 KU886269_p26 head to tail connecting protein phrog_104 portal protein head and packaging -1 20807 22564
ANH49266.1 KU886269_p2 hypothetical protein singleton unknown function unknown function -1 331 1281
ANH49302.1 KU886269_p38 hypothetical protein phrog_1221 unknown function unknown function 1 29004 29978
ANH49283.1 KU886269_p19 LysM domain containing protein singleton unknown function unknown function -1 11399 12796
ANH49317.1 KU886269_p53 P-loop containing nucleoside triphosphate hydrolase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 36435 37268
ANH49280.1 KU886269_p16 major capsid protein phrog_1357 major head protein head and packaging -1 7763 8740
ANH49314.1 KU886269_p50 hypothetical protein singleton unknown function unknown function -1 35497 35622
ANH49301.1 KU886269_p37 hypothetical protein singleton unknown function unknown function 1 28701 28961
ANH49323.1 KU886269_p59 shock protein B-like protein phrog_9869 unknown function unknown function -1 41806 42000
ANH49308.1 KU886269_p44 RNA polymerase sigma factor phrog_354 sigma-K factor transcription regulation -1 31993 32631
ANH49304.1 KU886269_p40 hypothetical protein singleton unknown function unknown function 1 30204 30431
ANH49291.1 KU886269_p27 terminase large subunit phrog_38 terminase large subunit head and packaging -1 22569 24458
ANH49295.1 KU886269_p31 host recBCD nuclease inhibitor singleton unknown function unknown function 1 25917 26234
ANH49277.1 KU886269_p13 hypothetical protein phrog_34011 unknown function unknown function -1 7156 7314
ANH49321.1 KU886269_p57 peptidoglycan binding protein singleton unknown function unknown function -1 39151 39369
ANH49298.1 KU886269_p34 hypothetical protein phrog_1392 unknown function unknown function 1 26925 27650
ANH49313.1 KU886269_p49 tRNA endonuclease-like domain containing protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 35144 35497
ANH49309.1 KU886269_p45 recombination endonuclease VII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism -1 32624 32911
ANH49281.1 KU886269_p17 DNA binding protein phrog_7813 unknown function unknown function -1 8774 9223
ANH49293.1 KU886269_p29 hypothetical protein singleton unknown function unknown function 1 25562 25735
ANH49284.1 KU886269_p20 hypothetical protein singleton unknown function unknown function -1 12796 13620
ANH49287.1 KU886269_p23 hypothetical protein phrog_8200 unknown function unknown function -1 18728 19123
ANH49303.1 KU886269_p39 hypothetical protein singleton unknown function unknown function 1 29981 30211
ANH49311.1 KU886269_p47 zinc finger domain containing protein phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 34392 34724
ANH49300.1 KU886269_p36 hypothetical protein singleton unknown function unknown function 1 28244 28690
ANH49296.1 KU886269_p32 hypothetical protein phrog_31860 unknown function unknown function 1 26237 26596
ANH49268.1 KU886269_p4 hypothetical protein singleton unknown function unknown function -1 1616 1834
ANH49297.1 KU886269_p33 hypothetical protein singleton unknown function unknown function 1 26589 26861
ANH49265.1 KU886269_p1 hypothetical protein phrog_14370 unknown function unknown function -1 104 322
ANH49267.1 KU886269_p3 hypothetical protein phrog_1276 unknown function unknown function -1 1283 1612
ANH49288.1 KU886269_p24 LysM domain containing protein singleton unknown function unknown function -1 19132 20634
ANH49312.1 KU886269_p48 lysozyme-like protein phrog_35836 transglycosylase other -1 34728 35087
ANH49310.1 KU886269_p46 hypothetical protein phrog_1485 unknown function unknown function -1 32892 33209
ANH49269.1 KU886269_p5 hypothetical protein phrog_7759 unknown function unknown function -1 1827 2201
ANH49286.1 KU886269_p22 hypothetical protein singleton unknown function unknown function -1 18552 18731
ANH49299.1 KU886269_p35 hypothetical protein singleton unknown function unknown function 1 27647 27994
ANH49272.1 KU886269_p8 tail fiber protein phrog_38058 tail fiber protein tail -1 3584 5494
ANH49319.1 KU886269_p55 PD-(D/E)XK nuclease superfamily protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 37730 38398
ANH49285.1 KU886269_p21 hypothetical protein phrog_10618 unknown function unknown function -1 13634 18571
ANH49315.1 KU886269_p51 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation -1 35619 35888
ANH49294.1 KU886269_p30 hypothetical protein singleton unknown function unknown function 1 25750 25917