Genomic map of Freshwater phage uvFW-CGR-AMD-COM-C429 (KU886270)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU886270
Definition
Freshwater phage uvFW-CGR-AMD-COM-C429, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
40987
Host Name
Actinobacteria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
40
%GC
47.63
Number of singletons
19
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANH49337.1 KU886270_p14 hypothetical protein singleton unknown function unknown function 1 6651 7052
ANH49346.1 KU886270_p23 hypothetical protein singleton unknown function unknown function 1 12788 13033
ANH49362.1 KU886270_p39 hypothetical protein singleton unknown function unknown function 1 38535 38789
ANH49344.1 KU886270_p21 hypothetical protein singleton unknown function unknown function 1 11706 12398
ANH49327.1 KU886270_p4 hypothetical protein phrog_32850 unknown function unknown function 1 1262 1471
ANH49332.1 KU886270_p9 hypothetical protein phrog_11717 unknown function unknown function 1 4269 4925
ANH49359.1 KU886270_p36 hypothetical protein singleton unknown function unknown function 1 34123 34233
ANH49343.1 KU886270_p20 hypothetical protein singleton unknown function unknown function -1 11500 11685
ANH49342.1 KU886270_p19 hypothetical protein singleton unknown function unknown function 1 10738 11442
ANH49357.1 KU886270_p34 hypothetical protein phrog_23524 unknown function unknown function 1 32642 33844
ANH49331.1 KU886270_p8 YqaJ-like viral recombinase phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 3316 4266
ANH49336.1 KU886270_p13 hypothetical protein singleton unknown function unknown function -1 6359 6568
ANH49348.1 KU886270_p25 terminase large subunit phrog_38 terminase large subunit head and packaging 1 13697 15658
ANH49349.1 KU886270_p26 hypothetical protein singleton unknown function unknown function 1 15711 20165
ANH49333.1 KU886270_p10 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 5233 5571
ANH49335.1 KU886270_p12 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 6048 6323
ANH49363.1 KU886270_p40 P-loop containing nucleoside triphosphate hydrolase phrog_27463 unknown function unknown function 1 38818 39645
ANH49354.1 KU886270_p31 hypothetical protein singleton unknown function unknown function 1 29452 30573
ANH49345.1 KU886270_p22 hypothetical protein singleton unknown function unknown function 1 12395 12568
ANH49356.1 KU886270_p33 hypothetical protein phrog_240 head protein head and packaging 1 32253 32621
ANH49325.1 KU886270_p2 nuclease phrog_26427 nuclease DNA, RNA and nucleotide metabolism 1 492 728
ANH49352.1 KU886270_p29 hypothetical protein singleton unknown function unknown function 1 27450 28454
ANH49350.1 KU886270_p27 hypothetical protein singleton unknown function unknown function 1 20167 20310
ANH49340.1 KU886270_p17 P-loop containing nucleoside triphosphate hydrolase phrog_16448 ATPase other 1 8631 9383
ANH49361.1 KU886270_p38 chaperone of endosialidase phrog_23837 virion structural protein head and packaging 1 36999 38522
ANH49353.1 KU886270_p30 hypothetical protein phrog_34303 unknown function unknown function 1 28454 29452
ANH49334.1 KU886270_p11 C-type lysozyme/alpha-lactalbumin family protein singleton unknown function unknown function 1 5590 6003
ANH49326.1 KU886270_p3 D-alanyl-D-alanine carboxypeptidase phrog_16823 tail length tape measure protein tail 1 733 1260
ANH49329.1 KU886270_p6 metallo-dependent phosphatase-like protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 2026 3039
ANH49355.1 KU886270_p32 hypothetical protein phrog_7813 unknown function unknown function 1 30725 31180
ANH49360.1 KU886270_p37 hypothetical protein phrog_7578 unknown function unknown function 1 34237 35121
ANH49328.1 KU886270_p5 hypothetical protein singleton unknown function unknown function -1 1533 1748
ANH49358.1 KU886270_p35 hypothetical protein phrog_24600 unknown function unknown function 1 33841 34110
ANH49338.1 KU886270_p15 hypothetical protein singleton unknown function unknown function 1 7411 7977
ANH49324.1 KU886270_p1 hypothetical protein phrog_29041 unknown function unknown function 1 328 495
ANH49330.1 KU886270_p7 hypothetical protein singleton unknown function unknown function 1 3024 3344
ANH49351.1 KU886270_p28 hypothetical protein phrog_8200 unknown function unknown function 1 22058 22399
ANH49339.1 KU886270_p16 hypothetical protein singleton unknown function unknown function 1 8156 8629
ANH49347.1 KU886270_p24 hypothetical protein singleton unknown function unknown function -1 13570 13680
ANH49341.1 KU886270_p18 hypothetical protein phrog_33218 unknown function unknown function 1 9383 10738