Genomic map of Freshwater phage uvFW-CGR-AMD-COM-C449 (KU886272)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU886272
Definition
Freshwater phage uvFW-CGR-AMD-COM-C449, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
40306
Host Name
Actinobacteria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
48.66
Number of singletons
32
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANH49433.1 KU886272_p13 hypothetical protein singleton unknown function unknown function -1 8373 8669
ANH49446.1 KU886272_p26 hypothetical protein singleton unknown function unknown function -1 26234 26908
ANH49424.1 KU886272_p4 hypothetical protein phrog_30535 unknown function unknown function -1 2608 2985
ANH49425.1 KU886272_p5 hypothetical protein phrog_23837 virion structural protein head and packaging -1 2995 3564
ANH49460.1 KU886272_p40 hypothetical protein singleton unknown function unknown function 1 30794 30973
ANH49458.1 KU886272_p38 hypothetical protein singleton unknown function unknown function 1 30530 30622
ANH49436.1 KU886272_p16 major capsid protein phrog_1357 major head protein head and packaging -1 10202 11170
ANH49430.1 KU886272_p10 hypothetical protein singleton unknown function unknown function -1 6840 7007
ANH49478.1 KU886272_p58 hypothetical protein phrog_26427 nuclease DNA, RNA and nucleotide metabolism -1 38971 39219
ANH49476.1 KU886272_p56 hypothetical protein singleton unknown function unknown function -1 37733 37999
ANH49456.1 KU886272_p36 hypothetical protein singleton unknown function unknown function 1 30133 30288
ANH49468.1 KU886272_p48 recombination endonuclease VII phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism -1 33634 34137
ANH49448.1 KU886272_p28 hypothetical protein singleton unknown function unknown function 1 27796 27996
ANH49464.1 KU886272_p44 transcription factor WhiB singleton unknown function unknown function -1 32151 32480
ANH49453.1 KU886272_p33 hypothetical protein singleton unknown function unknown function 1 29671 29790
ANH49423.1 KU886272_p3 hypothetical protein phrog_14370 unknown function unknown function -1 1590 1802
ANH49439.1 KU886272_p19 hypothetical protein phrog_6654 unknown function unknown function -1 12919 13851
ANH49437.1 KU886272_p17 hypothetical protein phrog_7813 unknown function unknown function -1 11197 11670
ANH49442.1 KU886272_p22 hypothetical protein phrog_8200 unknown function unknown function -1 20137 20526
ANH49452.1 KU886272_p32 hypothetical protein singleton unknown function unknown function 1 29364 29543
ANH49473.1 KU886272_p53 restriction endonuclease phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 35570 35920
ANH49422.1 KU886272_p2 eggshell protein signature containing protein phrog_2295 unknown function unknown function -1 748 1593
ANH49431.1 KU886272_p11 glycosyltransferase singleton unknown function unknown function -1 7004 8137
ANH49445.1 KU886272_p25 hypothetical protein singleton unknown function unknown function -1 25368 26234
ANH49427.1 KU886272_p7 hypothetical protein singleton unknown function unknown function -1 6313 6438
ANH49472.1 KU886272_p52 hypothetical protein singleton unknown function unknown function -1 35301 35570
ANH49461.1 KU886272_p41 hypothetical protein singleton unknown function unknown function 1 30970 31155
ANH49426.1 KU886272_p6 hypothetical protein phrog_7578 unknown function unknown function -1 5425 6312
ANH49463.1 KU886272_p43 RNA polymerase sigma factor-like protein singleton unknown function unknown function 1 31663 31818
ANH49469.1 KU886272_p49 hypothetical protein singleton unknown function unknown function -1 34134 34247
ANH49462.1 KU886272_p42 hypothetical protein singleton unknown function unknown function 1 31268 31666
ANH49434.1 KU886272_p14 hypothetical protein phrog_23524 unknown function unknown function -1 8669 9703
ANH49451.1 KU886272_p31 hypothetical protein phrog_1617 unknown function unknown function 1 28495 29349
ANH49459.1 KU886272_p39 hypothetical protein singleton unknown function unknown function 1 30615 30797
ANH49443.1 KU886272_p23 terminase large subunit phrog_38 terminase large subunit head and packaging -1 22399 24381
ANH49438.1 KU886272_p18 hypothetical protein phrog_8424 unknown function unknown function -1 11768 12916
ANH49421.1 KU886272_p1 hypothetical protein singleton unknown function unknown function -1 506 748
ANH49428.1 KU886272_p8 hypothetical protein phrog_33179 unknown function unknown function -1 6441 6569
ANH49455.1 KU886272_p35 hypothetical protein singleton unknown function unknown function 1 30017 30133
ANH49477.1 KU886272_p57 D-alanyl-D-alanine carboxypeptidase phrog_16823 tail length tape measure protein tail -1 38411 38971
ANH49435.1 KU886272_p15 hypothetical protein phrog_240 head protein head and packaging -1 9724 10086
ANH49440.1 KU886272_p20 hypothetical protein singleton unknown function unknown function -1 13854 14582
ANH49467.1 KU886272_p47 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 33230 33637
ANH49441.1 KU886272_p21 hypothetical protein singleton unknown function unknown function -1 14585 20140
ANH49474.1 KU886272_p54 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism -1 36071 36718
ANH49466.1 KU886272_p46 hypothetical protein singleton unknown function unknown function -1 32979 33230
ANH49432.1 KU886272_p12 hypothetical protein phrog_24600 unknown function unknown function -1 8101 8376
ANH49450.1 KU886272_p30 hypothetical protein singleton unknown function unknown function 1 28205 28390
ANH49457.1 KU886272_p37 hypothetical protein singleton unknown function unknown function 1 30288 30482
ANH49444.1 KU886272_p24 hypothetical protein singleton unknown function unknown function -1 24394 25368
ANH49447.1 KU886272_p27 hypothetical protein singleton unknown function unknown function 1 26930 27244
ANH49475.1 KU886272_p55 YqaJ-like viral recombinase phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism -1 36718 37674
ANH49449.1 KU886272_p29 hypothetical protein singleton unknown function unknown function 1 27996 28205
ANH49479.1 KU886272_p59 hypothetical protein phrog_29041 unknown function unknown function -1 39222 39383
ANH49470.1 KU886272_p50 lysozyme-like domain containing protein singleton unknown function unknown function -1 34304 34777
ANH49465.1 KU886272_p45 hypothetical protein phrog_474 phosphofructokinase other -1 32687 32992
ANH49454.1 KU886272_p34 hypothetical protein singleton unknown function unknown function 1 29781 29981
ANH49471.1 KU886272_p51 hypothetical protein phrog_13596 unknown function unknown function -1 34786 35220
ANH49429.1 KU886272_p9 hypothetical protein phrog_7595 unknown function unknown function -1 6595 6843