Genomic map of Freshwater phage uvFW-CGR-AMD-COM-C455 (KU886273)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU886273
Definition
Freshwater phage uvFW-CGR-AMD-COM-C455, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
40207
Host Name
Actinobacteria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
42.16
Number of singletons
25
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANH49494.1 KU886273_p15 hypothetical protein singleton unknown function unknown function -1 4882 5232
ANH49497.1 KU886273_p18 hypothetical protein phrog_1987 unknown function unknown function -1 5727 6131
ANH49523.1 KU886273_p44 peptidase M23 singleton unknown function unknown function 1 32609 33022
ANH49534.1 KU886273_p55 zinc finger domain containing protein singleton unknown function unknown function -1 37371 37715
ANH49493.1 KU886273_p14 hypothetical protein singleton unknown function unknown function -1 4670 4882
ANH49496.1 KU886273_p17 hypothetical protein singleton unknown function unknown function -1 5469 5642
ANH49510.1 KU886273_p31 hypothetical protein singleton unknown function unknown function 1 22547 22876
ANH49524.1 KU886273_p45 hypothetical protein phrog_9869 unknown function unknown function 1 33022 33228
ANH49515.1 KU886273_p36 hypothetical protein phrog_7578 unknown function unknown function 1 24173 25069
ANH49516.1 KU886273_p37 hypothetical protein singleton unknown function unknown function 1 25077 26957
ANH49500.1 KU886273_p21 large subunit terminase phrog_38 terminase large subunit head and packaging 1 7970 9829
ANH49489.1 KU886273_p10 hypothetical protein singleton unknown function unknown function -1 3865 3987
ANH49487.1 KU886273_p8 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation -1 3145 3696
ANH49519.1 KU886273_p40 nucleotide-diphospho-sugar transferase phrog_1574 unknown function unknown function 1 28426 29106
ANH49490.1 KU886273_p11 hypothetical protein singleton unknown function unknown function -1 3980 4168
ANH49492.1 KU886273_p13 hypothetical protein singleton unknown function unknown function -1 4395 4580
ANH49507.1 KU886273_p28 hypothetical protein phrog_7813 unknown function unknown function 1 20737 21198
ANH49530.1 KU886273_p51 hypothetical protein singleton unknown function unknown function -1 35145 35642
ANH49528.1 KU886273_p49 methyltransferase singleton unknown function unknown function -1 33865 34455
ANH49526.1 KU886273_p47 hypothetical protein singleton unknown function unknown function -1 33505 33684
ANH49491.1 KU886273_p12 hypothetical protein singleton unknown function unknown function -1 4165 4398
ANH49531.1 KU886273_p52 sigma-70 family RNA polymerase sigma factor phrog_354 sigma-K factor transcription regulation -1 35626 36321
ANH49533.1 KU886273_p54 hypothetical protein phrog_1485 unknown function unknown function -1 37079 37396
ANH49485.1 KU886273_p6 hypothetical protein singleton unknown function unknown function -1 2581 2778
ANH49502.1 KU886273_p23 nucleophile aminohydrolase phrog_1040 peptidase HslV family other 1 11592 12128
ANH49511.1 KU886273_p32 hypothetical protein singleton unknown function unknown function 1 22876 23019
ANH49532.1 KU886273_p53 metallo-dependent phosphatase-like domain containing protein phrog_221 metallo-phosphoesterase other -1 36324 37082
ANH49503.1 KU886273_p24 hypothetical protein phrog_8200 unknown function unknown function 1 12115 12558
ANH49506.1 KU886273_p27 restriction endonuclease phrog_8424 unknown function unknown function 1 19046 20617
ANH49512.1 KU886273_p33 hypothetical protein phrog_17747 unknown function unknown function 1 23483 23674
ANH49504.1 KU886273_p25 hypothetical protein phrog_10618 unknown function unknown function 1 12710 17923
ANH49509.1 KU886273_p30 hypothetical protein phrog_8987 unknown function unknown function 1 22299 22550
ANH49518.1 KU886273_p39 hypothetical protein singleton unknown function unknown function 1 27275 28405
ANH49535.1 KU886273_p56 toprim domain containing protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37712 38092
ANH49495.1 KU886273_p16 hypothetical protein singleton unknown function unknown function -1 5216 5395
ANH49483.1 KU886273_p4 PD-(D/E)XK nuclease superfamily protein phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 1599 2243
ANH49529.1 KU886273_p50 glycosyltransferase phrog_34859 glycosyltransferase moron, auxiliary metabolic gene and host takeover -1 34430 35161
ANH49499.1 KU886273_p20 SprT-like protein phrog_6361 unknown function unknown function -1 6565 7233
ANH49480.1 KU886273_p1 hypothetical protein singleton unknown function unknown function -1 195 329
ANH49525.1 KU886273_p46 hypothetical protein singleton unknown function unknown function 1 33221 33412
ANH49484.1 KU886273_p5 lysozyme-like domain containing protein phrog_35836 transglycosylase other -1 2234 2584
ANH49517.1 KU886273_p38 hypothetical protein phrog_1276 unknown function unknown function 1 26976 27275
ANH49537.1 KU886273_p58 tRNA endonuclease-like domain containing protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 38557 38913
ANH49501.1 KU886273_p22 portal protein phrog_104 portal protein head and packaging 1 9839 11590
ANH49486.1 KU886273_p7 DNA-directed RNA polymerase singleton unknown function unknown function -1 2955 3152
ANH49527.1 KU886273_p48 FmdB family regulatory protein phrog_1076 FmdB-like transcriptional regulator transcription regulation -1 33687 33863
ANH49522.1 KU886273_p43 hypothetical protein phrog_25359 unknown function unknown function 1 32350 32634
ANH49536.1 KU886273_p57 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38205 38537
ANH49520.1 KU886273_p41 glycosyltransferase phrog_2170 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 29106 30017
ANH49508.1 KU886273_p29 major capsid protein phrog_1357 major head protein head and packaging 1 21224 22234
ANH49521.1 KU886273_p42 hypothetical protein singleton unknown function unknown function 1 32169 32366
ANH49513.1 KU886273_p34 hypothetical protein phrog_14910 unknown function unknown function 1 23674 23910
ANH49514.1 KU886273_p35 hypothetical protein phrog_27452 unknown function unknown function 1 23910 24176
ANH49488.1 KU886273_p9 hypothetical protein singleton unknown function unknown function -1 3680 3865
ANH49481.1 KU886273_p2 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 326 1117
ANH49505.1 KU886273_p26 LysM domain containing protein singleton unknown function unknown function 1 17924 19042
ANH49498.1 KU886273_p19 DNA binding protein singleton unknown function unknown function -1 6212 6478
ANH49482.1 KU886273_p3 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 1186 1599