Genomic map of Freshwater phage uvFW-CGR-AMD-COM-C493 (KU886274)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU886274
Definition
Freshwater phage uvFW-CGR-AMD-COM-C493, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
38969
Host Name
Actinobacteria
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
45.18
Number of singletons
21
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANH49576.1 KU886274_p39 hypothetical protein phrog_17747 unknown function unknown function -1 34351 34536
ANH49546.1 KU886274_p9 hypothetical protein singleton unknown function unknown function -1 13547 14731
ANH49574.1 KU886274_p37 hypothetical protein phrog_4689 unknown function unknown function -1 33816 34115
ANH49558.1 KU886274_p21 transcription factor WhiB phrog_472 WhiB transcriptional factor transcription regulation -1 21398 21670
ANH49573.1 KU886274_p36 hypothetical protein phrog_33179 unknown function unknown function -1 33712 33816
ANH49560.1 KU886274_p23 hypothetical protein singleton unknown function unknown function -1 22289 22732
ANH49579.1 KU886274_p42 hypothetical protein phrog_240 head protein head and packaging -1 35802 36170
ANH49563.1 KU886274_p26 hypothetical protein singleton unknown function unknown function -1 24506 24760
ANH49577.1 KU886274_p40 hypothetical protein singleton unknown function unknown function -1 34533 34733
ANH49570.1 KU886274_p33 fimbrial-type adhesion domain containing protein phrog_30535 unknown function unknown function -1 30081 30443
ANH49539.1 KU886274_p2 hypothetical protein singleton unknown function unknown function -1 1038 1913
ANH49582.1 KU886274_p45 hypothetical protein singleton unknown function unknown function -1 37864 38967
ANH49538.1 KU886274_p1 hypothetical protein phrog_34303 unknown function unknown function -1 103 1038
ANH49559.1 KU886274_p22 lysozyme-like domain containing protein singleton unknown function unknown function -1 21711 22253
ANH49564.1 KU886274_p27 hypothetical protein phrog_32850 unknown function unknown function -1 26519 26740
ANH49578.1 KU886274_p41 hypothetical protein phrog_23524 unknown function unknown function -1 34802 35782
ANH49552.1 KU886274_p15 hypothetical protein singleton unknown function unknown function -1 18450 18902
ANH49580.1 KU886274_p43 major capsid protein phrog_1357 major head protein head and packaging -1 36246 37217
ANH49551.1 KU886274_p14 hypothetical protein singleton unknown function unknown function -1 18259 18450
ANH49544.1 KU886274_p7 terminase large subunit phrog_38 terminase large subunit head and packaging -1 11168 12877
ANH49545.1 KU886274_p8 hypothetical protein singleton unknown function unknown function -1 13117 13545
ANH49543.1 KU886274_p6 hypothetical protein singleton unknown function unknown function -1 9127 11130
ANH49556.1 KU886274_p19 hypothetical protein singleton unknown function unknown function -1 20932 21054
ANH49575.1 KU886274_p38 hypothetical protein phrog_14910 unknown function unknown function -1 34115 34351
ANH49554.1 KU886274_p17 hypothetical protein singleton unknown function unknown function -1 19677 19850
ANH49547.1 KU886274_p10 hypothetical protein singleton unknown function unknown function -1 14731 15222
ANH49561.1 KU886274_p24 hypothetical protein phrog_11717 unknown function unknown function -1 22871 23539
ANH49566.1 KU886274_p29 hypothetical protein singleton unknown function unknown function -1 27287 27655
ANH49568.1 KU886274_p31 hypothetical protein phrog_14370 unknown function unknown function -1 29012 29230
ANH49541.1 KU886274_p4 hypothetical protein phrog_8200 unknown function unknown function -1 6985 7365
ANH49569.1 KU886274_p32 hypothetical protein phrog_2295 unknown function unknown function -1 29227 30078
ANH49553.1 KU886274_p16 ATPase phrog_16448 ATPase other -1 18899 19639
ANH49557.1 KU886274_p20 hypothetical protein singleton unknown function unknown function -1 21243 21401
ANH49565.1 KU886274_p28 D-alanyl-D-alanine carboxypeptidase phrog_16823 tail length tape measure protein tail -1 26742 27287
ANH49572.1 KU886274_p35 hypothetical protein phrog_7578 unknown function unknown function -1 32825 33712
ANH49571.1 KU886274_p34 hypothetical protein phrog_23837 virion structural protein head and packaging -1 30456 30965
ANH49567.1 KU886274_p30 hypothetical protein singleton unknown function unknown function -1 27696 28823
ANH49548.1 KU886274_p11 hypothetical protein singleton unknown function unknown function -1 15607 15849
ANH49540.1 KU886274_p3 hypothetical protein singleton unknown function unknown function -1 1913 6985
ANH49581.1 KU886274_p44 hypothetical protein phrog_7813 unknown function unknown function -1 37243 37752
ANH49555.1 KU886274_p18 hypothetical protein singleton unknown function unknown function -1 20589 20804
ANH49542.1 KU886274_p5 hypothetical protein phrog_104 portal protein head and packaging -1 7367 9124
ANH49549.1 KU886274_p12 hypothetical protein singleton unknown function unknown function -1 16204 16926
ANH49550.1 KU886274_p13 hypothetical protein phrog_33218 unknown function unknown function -1 16931 18262
ANH49562.1 KU886274_p25 YqaJ-like viral recombinase phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism -1 23542 24477