| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU963258 |
Definition |
Gordonia phage Katyusha, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Demosthenesvirus; Gordonia virus Katyusha. |
DB of origin |
NUCCORE |
Length |
75380 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
99 |
%GC |
59.46 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AMS03434.1 | KU963258_p41 | hypothetical protein | phrog_15162 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 44825 | 44938 |
| AMS03464.1 | KU963258_p72 | hypothetical protein | phrog_25312 | unknown function | unknown function | -1 | 60090 | 60341 |
| AMS03445.1 | KU963258_p52 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 50091 | 50741 |
| AMS03474.1 | KU963258_p82 | hypothetical protein | phrog_17060 | unknown function | unknown function | -1 | 65792 | 66040 |
| AMS03460.1 | KU963258_p68 | hypothetical protein | phrog_33888 | unknown function | unknown function | -1 | 58592 | 58762 |
| AMS03424.1 | KU963258_p31 | membrane protein | phrog_565 | holin | lysis | 1 | 39098 | 39532 |
| AMS03428.1 | KU963258_p35 | membrane protein | phrog_2272 | unknown function | unknown function | 1 | 41422 | 41874 |
| AMS03439.1 | KU963258_p46 | hypothetical protein | phrog_23068 | unknown function | unknown function | -1 | 47239 | 47691 |
| AMS03415.1 | KU963258_p22 | head-to-tail connector protein | phrog_23445 | head-tail connector protein | connector | 1 | 20414 | 20842 |
| AMS03465.1 | KU963258_p73 | hypothetical protein | phrog_5392 | unknown function | unknown function | -1 | 60341 | 60661 |
| AMS03417.1 | KU963258_p25 | tail assembly chaperone | phrog_3096 | tail assembly chaperone | tail | 1 | 21969 | 22568 |
| AMS03483.1 | KU963258_p91 | hypothetical protein | phrog_10987 | unknown function | unknown function | -1 | 70963 | 71076 |
| AMS03463.1 | KU963258_p71 | hypothetical protein | phrog_27627 | unknown function | unknown function | -1 | 59662 | 60090 |
| AMS03447.1 | KU963258_p54 | hypothetical protein | phrog_22895 | unknown function | unknown function | -1 | 50877 | 51122 |
| AMS03471.1 | KU963258_p79 | hypothetical protein | phrog_12545 | unknown function | unknown function | -1 | 63198 | 63542 |
| AMS03420.1 | KU963258_p27 | minor tail protein | phrog_5287 | minor tail protein | tail | 1 | 32045 | 34609 |
| AMS03414.1 | KU963258_p21 | head-to-tail connector protein | phrog_5299 | unknown function | unknown function | 1 | 19909 | 20400 |
| AMS03472.1 | KU963258_p80 | hypothetical protein | phrog_10140 | unknown function | unknown function | -1 | 63542 | 63754 |
| AMS03427.1 | KU963258_p34 | lysin A | phrog_6985 | endolysin | lysis | 1 | 40565 | 41419 |
| AMS03397.1 | KU963258_p4 | hypothetical protein | phrog_7096 | unknown function | unknown function | -1 | 5374 | 5592 |
| AMS03453.1 | KU963258_p60 | hypothetical protein | phrog_6746 | unknown function | unknown function | -1 | 55152 | 55475 |
| AMS03394.1 | KU963258_p1 | hypothetical protein | phrog_24029 | unknown function | unknown function | -1 | 1857 | 2921 |
| AMS03443.1 | KU963258_p50 | DNA polymerase III beta subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 48744 | 49856 |
| AMS03481.1 | KU963258_p89 | hypothetical protein | phrog_889 | unknown function | unknown function | -1 | 70054 | 70662 |
| AMS03456.1 | KU963258_p63 | hypothetical protein | phrog_6792 | unknown function | unknown function | -1 | 56398 | 56922 |
| AMS03410.1 | KU963258_p17 | head-to-tail connector protein | phrog_7074 | head-tail connector protein | connector | 1 | 18330 | 18521 |
| AMS03485.1 | KU963258_p93 | hypothetical protein | phrog_22496 | unknown function | unknown function | -1 | 71414 | 71737 |
| AMS03441.1 | KU963258_p48 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 48224 | 48592 |
| AMS03440.1 | KU963258_p47 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 47691 | 48227 |
| AMS03412.1 | KU963258_p19 | head-to-tail connector protein | phrog_195 | head-tail adaptor | connector | 1 | 18909 | 19409 |
| AMS03467.1 | KU963258_p75 | hypothetical protein | phrog_6646 | unknown function | unknown function | -1 | 61191 | 61700 |
| AMS03423.1 | KU963258_p30 | hypothetical protein | phrog_8373 | unknown function | unknown function | 1 | 38816 | 39034 |
| AMS03490.1 | KU963258_p98 | hypothetical protein | phrog_17922 | unknown function | unknown function | -1 | 73734 | 74036 |
| AMS03402.1 | KU963258_p9 | terminase small subunit | phrog_6902 | terminase small subunit | head and packaging | 1 | 7404 | 8801 |
| AMS03482.1 | KU963258_p90 | hypothetical protein | phrog_24128 | unknown function | unknown function | -1 | 70659 | 70970 |
| AMS03457.1 | KU963258_p64 | hypothetical protein | phrog_6495 | unknown function | unknown function | -1 | 56924 | 57187 |
| AMS03421.1 | KU963258_p28 | minor tail protein | phrog_1887 | tail protein | tail | 1 | 34609 | 36867 |
| AMS03455.1 | KU963258_p62 | hypothetical protein | phrog_6622 | unknown function | unknown function | -1 | 55779 | 56435 |
| AMS03478.1 | KU963258_p86 | hypothetical protein | phrog_7008 | unknown function | unknown function | -1 | 68133 | 68747 |
| AMS03470.1 | KU963258_p78 | hypothetical protein | phrog_4480 | unknown function | unknown function | -1 | 62906 | 63193 |
| AMS03450.1 | KU963258_p57 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 51616 | 53319 |
| AMS03486.1 | KU963258_p94 | hypothetical protein | phrog_10234 | unknown function | unknown function | -1 | 71768 | 71935 |
| AMS03466.1 | KU963258_p74 | hypothetical protein | phrog_7690 | unknown function | unknown function | -1 | 60703 | 61122 |
| AMS03399.1 | KU963258_p6 | hypothetical protein | phrog_12599 | unknown function | unknown function | -1 | 5730 | 5963 |
| AMS03484.1 | KU963258_p92 | hypothetical protein | phrog_26243 | unknown function | unknown function | -1 | 71073 | 71381 |
| AMS03488.1 | KU963258_p96 | hypothetical protein | phrog_26269 | unknown function | unknown function | -1 | 73207 | 73386 |
| AMS03444.1 | KU963258_p51 | hypothetical protein | phrog_9572 | sulfatase-modifying factor enzyme | other | -1 | 49834 | 50091 |
| AMS03449.1 | KU963258_p56 | hypothetical protein | phrog_37279 | unknown function | unknown function | -1 | 51368 | 51619 |
| AMS03487.1 | KU963258_p95 | hypothetical protein | phrog_6708 | unknown function | unknown function | -1 | 72072 | 73010 |
| AMS03491.1 | KU963258_p99 | hypothetical protein | phrog_24747 | unknown function | unknown function | -1 | 74132 | 74617 |
| AMS03407.1 | KU963258_p14 | capsid maturation protease | phrog_976 | head maturation protease | head and packaging | 1 | 15343 | 16554 |
| AMS03418.1 | KU963258_p24 | tail assembly chaperone | phrog_3096 | tail assembly chaperone | tail | 1 | 21969 | 22852 |
| AMS03468.1 | KU963258_p76 | hypothetical protein | phrog_27073 | unknown function | unknown function | -1 | 61802 | 62275 |
| AMS03437.1 | KU963258_p44 | lysin B | phrog_102 | endolysin | lysis | -1 | 45915 | 46742 |
| AMS03473.1 | KU963258_p81 | hypothetical protein | phrog_5298 | cobalamin biosynthesis protein | moron, auxiliary metabolic gene and host takeover | -1 | 63765 | 65792 |
| AMS03475.1 | KU963258_p83 | hypothetical protein | phrog_32321 | unknown function | unknown function | -1 | 66040 | 66354 |
| AMS03461.1 | KU963258_p69 | hypothetical protein | phrog_30119 | unknown function | unknown function | -1 | 58759 | 58911 |
| AMS03409.1 | KU963258_p16 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 17078 | 18292 |
| AMS03426.1 | KU963258_p33 | lysin A | phrog_880 | endolysin | lysis | 1 | 39924 | 40565 |
| AMS03419.1 | KU963258_p26 | tape measure protein | phrog_5448 | tail length tape measure protein | tail | 1 | 22965 | 32048 |
| AMS03411.1 | KU963258_p18 | head-to-tail connector protein | phrog_6879 | head-tail connector protein | connector | 1 | 18609 | 18899 |
| AMS03395.1 | KU963258_p2 | hypothetical protein | phrog_7062 | unknown function | unknown function | -1 | 2921 | 3238 |
| AMS03413.1 | KU963258_p20 | head-to-tail connector protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 19397 | 19909 |
| AMS03396.1 | KU963258_p3 | DNA-binding domain protein | phrog_5311 | helicase | DNA, RNA and nucleotide metabolism | -1 | 3240 | 5381 |
| AMS03480.1 | KU963258_p88 | hypothetical protein | phrog_6032 | unknown function | unknown function | -1 | 69209 | 70009 |
| AMS03401.1 | KU963258_p8 | DNA primase | phrog_5362 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 6348 | 7220 |
| AMS03433.1 | KU963258_p40 | hypothetical protein | phrog_6890 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44286 | 44738 |
| AMS03446.1 | KU963258_p53 | HTH DNA-binding domain protein | phrog_10045 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 50738 | 50926 |
| AMS03405.1 | KU963258_p12 | structural protein | phrog_9707 | tail protein | tail | 1 | 12604 | 14997 |
| AMS03404.1 | KU963258_p11 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 10878 | 12617 |
| AMS03448.1 | KU963258_p55 | hypothetical protein | phrog_22291 | unknown function | unknown function | -1 | 51133 | 51375 |
| AMS03477.1 | KU963258_p85 | AAA-ATPase | phrog_5424 | ATPase | other | -1 | 66520 | 68067 |
| AMS03429.1 | KU963258_p36 | membrane domain protein | phrog_5552 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 41840 | 42316 |
| AMS03422.1 | KU963258_p29 | minor tail protein | phrog_4978 | tail protein | tail | 1 | 36845 | 38806 |
| AMS03435.1 | KU963258_p42 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 44935 | 45651 |
| AMS03416.1 | KU963258_p23 | major tail protein | phrog_290 | minor tail protein | tail | 1 | 20846 | 21865 |
| AMS03442.1 | KU963258_p49 | hypothetical protein | phrog_36456 | unknown function | unknown function | -1 | 48589 | 48747 |
| AMS03400.1 | KU963258_p7 | hypothetical protein | phrog_7609 | unknown function | unknown function | -1 | 5953 | 6351 |
| AMS03438.1 | KU963258_p45 | nucleotide pyrophosphohydrolase | phrog_3301 | pyrophosphatase | other | -1 | 46744 | 47238 |
| AMS03451.1 | KU963258_p58 | hypothetical protein | phrog_7649 | unknown function | unknown function | -1 | 53323 | 53919 |
| AMS03431.1 | KU963258_p38 | nuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42865 | 44070 |
| AMS03454.1 | KU963258_p61 | hypothetical protein | phrog_7044 | unknown function | unknown function | -1 | 55468 | 55776 |
| AMS03408.1 | KU963258_p15 | scaffolding protein | phrog_5455 | head decoration | head and packaging | 1 | 16598 | 17065 |
| AMS03406.1 | KU963258_p13 | hypothetical protein | phrog_6679 | unknown function | unknown function | 1 | 15021 | 15329 |
| AMS03430.1 | KU963258_p37 | membrane domain protein | phrog_9090 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 42326 | 42721 |
| AMS03479.1 | KU963258_p87 | hypothetical protein | phrog_7001 | unknown function | unknown function | -1 | 68747 | 69205 |
| AMS03452.1 | KU963258_p59 | hypothetical protein | phrog_5686 | unknown function | unknown function | -1 | 53990 | 55042 |
| AMS03436.1 | KU963258_p43 | hypothetical protein | phrog_28930 | unknown function | unknown function | -1 | 45648 | 45905 |
| AMS03489.1 | KU963258_p97 | hypothetical protein | phrog_23086 | unknown function | unknown function | -1 | 73391 | 73729 |
| AMS03462.1 | KU963258_p70 | hypothetical protein | phrog_5406 | unknown function | unknown function | -1 | 58901 | 59662 |
| AMS03425.1 | KU963258_p32 | hypothetical protein | phrog_6901 | unknown function | unknown function | 1 | 39598 | 39927 |
| AMS03398.1 | KU963258_p5 | hypothetical protein | phrog_27754 | unknown function | unknown function | -1 | 5585 | 5752 |
| AMS03476.1 | KU963258_p84 | hypothetical protein | phrog_24702 | unknown function | unknown function | -1 | 66347 | 66520 |
| ANG56535.1 | KU963258_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58423 | 58575 |
| AMS03469.1 | KU963258_p77 | HNH endonuclease | phrog_9508 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 62386 | 62919 |
| AMS03432.1 | KU963258_p39 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | -1 | 44074 | 44274 |
| AMS03458.1 | KU963258_p65 | hypothetical protein | phrog_22468 | unknown function | unknown function | -1 | 57200 | 58090 |
| AMS03459.1 | KU963258_p66 | hypothetical protein | phrog_18683 | unknown function | unknown function | -1 | 58077 | 58418 |
| AMS03403.1 | KU963258_p10 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 8798 | 10765 |