Genomic map of Stx1 converting phage AU5Stx1 (KU977419)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU977419
Definition
Stx1 converting phage AU5Stx1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus.
DB of origin
NUCCORE
Length
58371
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
85
%GC
49.77
Number of singletons
4
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANJ63822.1 KU977419_p29 transcription activator CII phrog_191 CII-like transcriptional activator transcription regulation 1 13942 14238
ANJ63809.1 KU977419_p16 hypothetical protein phrog_292 unknown function unknown function -1 7899 8090
ANJ63810.1 KU977419_p17 hypothetical protein phrog_1998 unknown function unknown function -1 8063 8251
ANJ63855.1 KU977419_p62 large subunit terminase phrog_2 terminase large subunit head and packaging 1 30403 32109
ANJ63830.1 KU977419_p37 recombinase NinB phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 17095 17541
ANJ63836.1 KU977419_p43 NinF protein phrog_672 unknown function unknown function 1 19654 19830
ANJ63828.1 KU977419_p35 hypothetical protein phrog_1785 unknown function unknown function 1 16676 16891
ANJ63872.1 KU977419_p79 host toxic membrane protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover 1 46461 46601
ANJ63841.1 KU977419_p48 shiga toxin I subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 22275 23222
ANJ63840.1 KU977419_p47 antitermination protein Q phrog_79 anti-termination protein Q-like transcription regulation 1 21334 21768
ANJ63799.1 KU977419_p6 hypothetical protein phrog_292 unknown function unknown function -1 2657 2869
ANJ63835.1 KU977419_p42 hypothetical protein singleton unknown function unknown function 1 19262 19513
ANJ63866.1 KU977419_p73 hypothetical protein phrog_11089 unknown function unknown function 1 41363 41482
ANJ63875.1 KU977419_p82 hypothetical protein phrog_596 unknown function unknown function 1 47812 48258
ANJ63806.1 KU977419_p13 hypothetical protein phrog_250 unknown function unknown function -1 6343 7290
ANJ63837.1 KU977419_p44 regulatory protein phrog_63 anti-repressor Ant transcription regulation 1 19823 20545
ANJ63817.1 KU977419_p24 hypothetical protein phrog_1636 unknown function unknown function -1 10950 11420
ANJ63825.1 KU977419_p32 protein ren phrog_142 Ren-like exclusion protein moron, auxiliary metabolic gene and host takeover 1 15904 16194
ANJ63860.1 KU977419_p67 hypothetical protein phrog_482 unknown function unknown function 1 37124 37612
ANJ63846.1 KU977419_p53 holin phrog_20 holin lysis 1 26651 26866
ANJ63832.1 KU977419_p39 protein NinE phrog_288 unknown function unknown function 1 18062 18256
ANJ63808.1 KU977419_p15 hypothetical protein phrog_303 unknown function unknown function -1 7607 7888
ANJ63867.1 KU977419_p74 hypothetical protein phrog_511 internal virion protein head and packaging 1 41519 43222
ANJ63859.1 KU977419_p66 capsid protein phrog_486 virion structural protein head and packaging 1 36712 37101
ANJ63829.1 KU977419_p36 restriction alleviation protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 16902 17138
ANJ63843.1 KU977419_p50 acetylesterase phrog_143 unknown function unknown function 1 24005 25945
ANJ63845.1 KU977419_p52 hypothetical protein phrog_311 unknown function unknown function 1 26302 26574
ANJ63856.1 KU977419_p63 portal protein phrog_156 portal protein head and packaging 1 32109 34253
ANJ63795.1 KU977419_p2 excisionase phrog_66 excisionase and transcriptional regulator integration and excision -1 1373 1555
ANJ63824.1 KU977419_p31 replication protein P phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 15206 15907
ANJ63833.1 KU977419_p40 hypothetical protein singleton unknown function unknown function 1 18253 18321
ANJ63820.1 KU977419_p27 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 12752 13456
ANJ63805.1 KU977419_p12 hypothetical protein phrog_631 unknown function unknown function -1 5826 6341
ANJ63853.1 KU977419_p60 hypothetical protein phrog_6954 Rz-like spanin lysis 1 29315 29560
ANJ63876.1 KU977419_p83 bacteriocin phrog_594 unknown function unknown function 1 48268 48519
ANJ63869.1 KU977419_p76 hypothetical protein phrog_557 outer membrane protein other 1 44502 44780
ANJ63816.1 KU977419_p23 hypothetical protein phrog_646 unknown function unknown function -1 10431 10799
ANJ63852.1 KU977419_p59 lipoprotein bor phrog_260 Bor-like outer membrane protein other -1 28914 29207
ANJ63844.1 KU977419_p51 hypothetical protein phrog_494 unknown function unknown function 1 26082 26261
ANJ63865.1 KU977419_p72 hypothetical protein phrog_2014 unknown function unknown function 1 41060 41302
ANJ63819.1 KU977419_p26 hypothetical protein singleton unknown function unknown function -1 12278 12421
ANJ63800.1 KU977419_p7 adenine methylase phrog_359 DNA methyltransferase other -1 2829 3455
ANJ63847.1 KU977419_p54 endolysin phrog_7 endolysin lysis 1 26871 27404
ANJ63823.1 KU977419_p30 replication protein O phrog_277 replication initiation O-like DNA, RNA and nucleotide metabolism 1 14271 15209
ANJ63827.1 KU977419_p34 hypothetical protein phrog_343 unknown function unknown function 1 16265 16543
ANJ63804.1 KU977419_p11 hypothetical protein phrog_60 unknown function unknown function -1 4933 5829
ANJ63838.1 KU977419_p45 protein NinG phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 20545 21150
ANJ63858.1 KU977419_p65 capsid protein phrog_334 major head protein head and packaging 1 35442 36656
ANJ63854.1 KU977419_p61 small subunit terminase phrog_370 terminase small subunit head and packaging 1 29616 30422
ANJ63811.1 KU977419_p18 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 8242 8922
ANJ63873.1 KU977419_p80 hypothetical protein phrog_610 unknown function unknown function 1 46658 47059
ANJ63862.1 KU977419_p69 hypothetical protein phrog_399 structural protein head and packaging 1 38159 38809
ANJ63813.1 KU977419_p20 host-nuclease inhibitor Gam phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 9710 10006
ANJ63831.1 KU977419_p38 adenine methyltransferase phrog_111 DNA methyltransferase other 1 17538 18065
ANJ63797.1 KU977419_p4 hypothetical protein phrog_1001 unknown function unknown function -1 1855 2088
ANJ63857.1 KU977419_p64 hypothetical protein phrog_479 unknown function unknown function 1 34411 35418
ANJ63861.1 KU977419_p68 hypothetical protein phrog_437 virion structural protein head and packaging 1 37596 38159
ANJ63878.1 KU977419_p85 hypothetical protein phrog_616 unknown function unknown function 1 49826 58249
ANJ63801.1 KU977419_p8 hypothetical protein phrog_1680 unknown function unknown function -1 3452 3883
ANJ63871.1 KU977419_p78 outermembrane protein Lom phrog_108 Lom outer membrane protein other 1 45494 46228
ANJ63798.1 KU977419_p5 hypothetical protein phrog_1888 unknown function unknown function -1 2232 2621
ANJ63848.1 KU977419_p55 anti-repressor protein phrog_524 anti-repressor Ant transcription regulation 1 27719 28261
ANJ63850.1 KU977419_p57 spanin inner membrane subunit phrog_13 Rz-like spanin lysis 1 28418 28882
ANJ63864.1 KU977419_p71 alternate tail fiber tip phrog_576 tail fiber protein tail 1 40583 40972
ANJ63863.1 KU977419_p70 tail fiber phrog_366 tail fiber protein tail 1 38806 40701
ANJ63874.1 KU977419_p81 hypothetical protein phrog_611 unknown function unknown function 1 47153 47809
ANJ63851.1 KU977419_p58 spanin outer membrane subunit phrog_3198 Rz-like spanin lysis 1 28638 28823
ANJ63794.1 KU977419_p1 integrase phrog_1 integrase integration and excision 1 220 1389
ANJ63826.1 KU977419_p33 hypothetical protein phrog_5907 unknown function unknown function 1 16191 16268
ANJ63839.1 KU977419_p46 protein NinH phrog_268 unknown function unknown function 1 21147 21341
ANJ63812.1 KU977419_p19 recombination protein Bet phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 8919 9704
ANJ63870.1 KU977419_p77 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 44786 45403
ANJ63877.1 KU977419_p84 hypothetical protein phrog_601 unknown function unknown function 1 48530 49795
ANJ63807.1 KU977419_p14 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 7287 7508
ANJ63803.1 KU977419_p10 hypothetical protein singleton unknown function unknown function -1 4842 4940
ANJ63818.1 KU977419_p25 antitermination protein N phrog_271 anti-termination protein N-like transcription regulation -1 11479 11862
ANJ63842.1 KU977419_p49 shiga toxin I subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 23232 23501
ANJ63814.1 KU977419_p21 Kil protein phrog_2461 Kil protein for bacterial septation inhibition other -1 10082 10351
ANJ63834.1 KU977419_p41 anti-repressor protein phrog_377 anti-repressor Ant transcription regulation 1 18513 19187
ANJ63821.1 KU977419_p28 regulatory protein Cro phrog_35 transcriptional repressor transcription regulation 1 13570 13803
ANJ63802.1 KU977419_p9 anti-repressor protein phrog_377 anti-repressor Ant transcription regulation -1 3939 4577
ANJ63815.1 KU977419_p22 protease inhibitor III phrog_550 CIII anti-termination transcription regulation -1 10194 10358
ANJ63796.1 KU977419_p3 hypothetical protein phrog_285 unknown function unknown function -1 1616 1867
ANJ63868.1 KU977419_p75 tail tip protein phrog_496 tail fiber protein tail 1 43219 44487
ANJ63849.1 KU977419_p56 hypothetical protein phrog_4906 unknown function unknown function 1 28276 28410