Genomic map of Stx1 converting phage AU6Stx1 (KU977420)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU977420
Definition
Stx1 converting phage AU6Stx1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus.
DB of origin
NUCCORE
Length
57123
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
48.73
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANJ63888.1 KU977420_p10 host-nuclease inhibitor Gam phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 5683 5979
ANJ63920.1 KU977420_p42 hypothetical protein phrog_311 unknown function unknown function 1 25054 25326
ANJ63946.1 KU977420_p68 outermembrane protein Lom phrog_108 Lom outer membrane protein other 1 44246 44980
ANJ63912.1 KU977420_p34 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 18711 19316
ANJ63933.1 KU977420_p55 capsid protein phrog_334 major head protein head and packaging 1 34194 35408
ANJ63903.1 KU977420_p25 protein ren phrog_142 Ren-like exclusion protein moron, auxiliary metabolic gene and host takeover 1 13576 13866
ANJ63902.1 KU977420_p24 replication protein P phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 12878 13579
ANJ63908.1 KU977420_p30 recombinase NinB phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 14767 15213
ANJ63882.1 KU977420_p4 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 3261 3482
ANJ63906.1 KU977420_p28 hypothetical protein phrog_1785 unknown function unknown function 1 14348 14563
ANJ63947.1 KU977420_p69 host toxic membrane protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover 1 45213 45353
ANJ63934.1 KU977420_p56 capsid protein phrog_486 virion structural protein head and packaging 1 35464 35853
ANJ63919.1 KU977420_p41 hypothetical protein phrog_494 unknown function unknown function 1 24834 25013
ANJ63900.1 KU977420_p22 transcription activator CII phrog_191 CII-like transcriptional activator transcription regulation 1 11614 11910
ANJ63937.1 KU977420_p59 hypothetical protein phrog_399 structural protein head and packaging 1 36911 37561
ANJ63879.1 KU977420_p1 integrase phrog_1 integrase integration and excision 1 220 1389
ANJ63918.1 KU977420_p40 acetylesterase phrog_143 unknown function unknown function 1 22757 24697
ANJ63950.1 KU977420_p72 hypothetical protein phrog_596 unknown function unknown function 1 46564 47010
ANJ63948.1 KU977420_p70 hypothetical protein phrog_610 unknown function unknown function 1 45410 45811
ANJ63938.1 KU977420_p60 tail fiber phrog_366 tail fiber protein tail 1 37558 39453
ANJ63897.1 KU977420_p19 hypothetical protein phrog_3467 unknown function unknown function -1 10060 10401
ANJ63949.1 KU977420_p71 hypothetical protein phrog_611 unknown function unknown function 1 45905 46561
ANJ63914.1 KU977420_p36 protein NinH phrog_268 unknown function unknown function 1 19899 20093
ANJ63890.1 KU977420_p12 protease inhibitor III phrog_550 CIII anti-termination transcription regulation -1 6167 6331
ANJ63928.1 KU977420_p50 hypothetical protein phrog_6954 Rz-like spanin lysis 1 28067 28312
ANJ63887.1 KU977420_p9 recombination protein Bet phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 4892 5677
ANJ63907.1 KU977420_p29 restriction alleviation protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 14574 14810
ANJ63909.1 KU977420_p31 adenine methyltransferase phrog_111 DNA methyltransferase other 1 15210 15737
ANJ63899.1 KU977420_p21 regulatory protein Cro phrog_35 transcriptional repressor transcription regulation 1 11248 11475
ANJ63930.1 KU977420_p52 large subunit terminase phrog_2 terminase large subunit head and packaging 1 29155 30861
ANJ63952.1 KU977420_p74 hypothetical protein phrog_601 unknown function unknown function 1 47282 48547
ANJ63895.1 KU977420_p17 serine/threonine kinase phrog_2361 serine-threonine kinase other -1 8491 9537
ANJ63911.1 KU977420_p33 hypothetical protein phrog_9230 unknown function unknown function -1 16420 18192
ANJ63943.1 KU977420_p65 tail tip protein phrog_496 tail fiber protein tail 1 41971 43239
ANJ63939.1 KU977420_p61 alternate tail fiber tip phrog_576 tail fiber protein tail 1 39335 39724
ANJ63923.1 KU977420_p45 anti-repressor protein phrog_524 anti-repressor Ant transcription regulation 1 26471 27013
ANJ63893.1 KU977420_p15 antitermination protein N phrog_271 anti-termination protein N-like transcription regulation -1 7452 7835
ANJ63905.1 KU977420_p27 hypothetical protein phrog_343 unknown function unknown function 1 13937 14215
ANJ63926.1 KU977420_p48 spanin outer membrane subunit phrog_3198 Rz-like spanin lysis 1 27390 27575
ANJ63921.1 KU977420_p43 holin phrog_20 holin lysis 1 25403 25618
ANJ63892.1 KU977420_p14 hypothetical protein phrog_1636 unknown function unknown function -1 6923 7393
ANJ63915.1 KU977420_p37 antitermination protein Q phrog_79 anti-termination protein Q-like transcription regulation 1 20086 20520
ANJ63910.1 KU977420_p32 protein NinE phrog_288 unknown function unknown function 1 15734 15916
ANJ63929.1 KU977420_p51 small subunit terminase phrog_370 terminase small subunit head and packaging 1 28368 29174
ANJ63884.1 KU977420_p6 hypothetical protein phrog_292 unknown function unknown function -1 3872 4063
ANJ63922.1 KU977420_p44 endolysin phrog_7 endolysin lysis 1 25623 26156
ANJ63881.1 KU977420_p3 hypothetical protein phrog_285 unknown function unknown function -1 1616 1867
ANJ63894.1 KU977420_p16 hypothetical protein phrog_4063 unknown function unknown function -1 8324 8488
ANJ63917.1 KU977420_p39 shiga toxin I subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 21984 22253
ANJ63927.1 KU977420_p49 lipoprotein bor phrog_260 Bor-like outer membrane protein other -1 27666 27959
ANJ63953.1 KU977420_p75 hypothetical protein phrog_616 unknown function unknown function 1 48578 57001
ANJ63886.1 KU977420_p8 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 4215 4895
ANJ63944.1 KU977420_p66 hypothetical protein phrog_557 outer membrane protein other 1 43254 43532
ANJ63936.1 KU977420_p58 hypothetical protein phrog_437 virion structural protein head and packaging 1 36348 36911
ANJ63924.1 KU977420_p46 hypothetical protein phrog_4906 unknown function unknown function 1 27028 27162
ANJ63904.1 KU977420_p26 hypothetical protein phrog_5907 unknown function unknown function 1 13863 13940
ANJ63913.1 KU977420_p35 protein NinG phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 19291 19902
ANJ63945.1 KU977420_p67 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 43538 44155
ANJ63940.1 KU977420_p62 hypothetical protein phrog_2014 unknown function unknown function 1 39812 40054
ANJ63931.1 KU977420_p53 portal protein phrog_156 portal protein head and packaging 1 30861 33005
ANJ63951.1 KU977420_p73 bacteriocin phrog_594 unknown function unknown function 1 47020 47271
ANJ63932.1 KU977420_p54 hypothetical protein phrog_479 unknown function unknown function 1 33163 34170
ANJ63889.1 KU977420_p11 Kil protein phrog_2461 Kil protein for bacterial septation inhibition other -1 6055 6324
ANJ63925.1 KU977420_p47 spanin inner membrane subunit phrog_13 Rz-like spanin lysis 1 27170 27634
ANJ63880.1 KU977420_p2 excisionase phrog_66 excisionase and transcriptional regulator integration and excision -1 1373 1555
ANJ63883.1 KU977420_p5 hypothetical protein phrog_303 unknown function unknown function -1 3580 3861
ANJ63885.1 KU977420_p7 hypothetical protein phrog_1998 unknown function unknown function -1 4036 4224
ANJ63941.1 KU977420_p63 hypothetical protein phrog_11089 unknown function unknown function 1 40115 40234
ANJ63942.1 KU977420_p64 hypothetical protein phrog_511 internal virion protein head and packaging 1 40271 41974
ANJ63935.1 KU977420_p57 hypothetical protein phrog_482 unknown function unknown function 1 35876 36364
ANJ63896.1 KU977420_p18 hypothetical protein phrog_3875 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 9531 9992
ANJ63901.1 KU977420_p23 replication protein O phrog_277 replication initiation O-like DNA, RNA and nucleotide metabolism 1 11943 12881
ANJ63916.1 KU977420_p38 shiga toxin I subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 21027 21974
ANJ63891.1 KU977420_p13 hypothetical protein phrog_646 unknown function unknown function -1 6404 6772
ANJ63898.1 KU977420_p20 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 10462 11169