Genomic map of Mycobacterium phage ChipMunk (KU985095)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU985095
Definition
Mycobacterium phage ChipMunk, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
53932
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.05
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMW64346.1 KU985095_p89 hypothetical protein phrog_519 unknown function unknown function -1 50941 51108
AMW64272.1 KU985095_p15 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11083 11967
AMW64327.1 KU985095_p70 hypothetical protein phrog_2731 unknown function unknown function -1 44228 44365
AMW64305.1 KU985095_p48 helix-turn-helix domain containing protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 33451 33873
AMW64283.1 KU985095_p25 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16201 17033
AMW64304.1 KU985095_p47 hypothetical protein phrog_4326 unknown function unknown function -1 33212 33451
AMW64351.1 KU985095_p94 hypothetical protein phrog_1676 unknown function unknown function -1 52378 52668
AMW64301.1 KU985095_p44 hypothetical protein phrog_3283 unknown function unknown function -1 30938 31165
AMW64343.1 KU985095_p86 hypothetical protein phrog_3718 unknown function unknown function -1 49781 50092
AMW64341.1 KU985095_p84 hypothetical protein phrog_421 unknown function unknown function -1 48881 49636
AMW64281.1 KU985095_p24 major tail protein phrog_117 major tail protein tail 1 15499 16089
AMW64347.1 KU985095_p90 hypothetical protein phrog_1946 unknown function unknown function -1 51105 51305
AMW64319.1 KU985095_p62 hypothetical protein phrog_1370 unknown function unknown function -1 40868 41005
AMW64278.1 KU985095_p21 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 14336 14704
AMW64311.1 KU985095_p54 hypothetical protein phrog_499 unknown function unknown function -1 37664 37846
AMW64261.1 KU985095_p4 hypothetical protein phrog_4491 unknown function unknown function 1 2257 2562
AMW64307.1 KU985095_p50 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 34081 34806
AMW64270.1 KU985095_p13 terminase phrog_9 terminase large subunit head and packaging 1 7824 9611
AMW64273.1 KU985095_p16 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 12018 12530
AMW64268.1 KU985095_p11 holin phrog_526 holin lysis 1 6373 6813
AMW64338.1 KU985095_p81 hypothetical protein phrog_3351 unknown function unknown function -1 48221 48448
AMW64264.1 KU985095_p7 hypothetical protein phrog_1260 minor tail protein tail 1 3450 4415
AMW64320.1 KU985095_p63 recombination endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41031 41504
AMW64263.1 KU985095_p6 hypothetical protein phrog_226 minor tail protein tail 1 2895 3365
AMW64259.1 KU985095_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 660 1427
AMW64300.1 KU985095_p43 hypothetical protein phrog_3771 unknown function unknown function -1 30654 30914
AMW64348.1 KU985095_p91 hypothetical protein phrog_6255 unknown function unknown function -1 51305 51553
AMW64286.1 KU985095_p29 minor tail subunit phrog_110 minor tail protein tail 1 20600 22372
AMW64324.1 KU985095_p67 hypothetical protein phrog_397 unknown function unknown function -1 42706 42936
AMW64262.1 KU985095_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2559 2855
AMW64328.1 KU985095_p71 hypothetical protein phrog_520 unknown function unknown function -1 44362 44601
AMW64334.1 KU985095_p77 hypothetical protein phrog_4294 unknown function unknown function -1 47394 47555
AMW64321.1 KU985095_p64 hypothetical protein phrog_2187 unknown function unknown function -1 41470 41613
AMW64302.1 KU985095_p45 hypothetical protein phrog_896 unknown function unknown function -1 31165 31386
AMW64317.1 KU985095_p60 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 40026 40658
AMW64306.1 KU985095_p49 hypothetical protein phrog_690 unknown function unknown function -1 33870 34079
AMW64336.1 KU985095_p79 hypothetical protein phrog_1178 unknown function unknown function -1 47692 47961
AMW64291.1 KU985095_p34 hypothetical protein phrog_240 head protein head and packaging 1 26568 26960
AMW64337.1 KU985095_p80 hypothetical protein phrog_1875 unknown function unknown function -1 47958 48224
AMW64308.1 KU985095_p51 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34883 35413
AMW64289.1 KU985095_p32 minor tail subunit phrog_737 minor tail protein tail 1 23177 25654
AMW64329.1 KU985095_p72 hypothetical protein phrog_642 unknown function unknown function -1 44630 44854
AMW64315.1 KU985095_p58 hypothetical protein phrog_474 phosphofructokinase other -1 39434 39757
AMW64318.1 KU985095_p61 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 40486 40890
AMW64313.1 KU985095_p56 hypothetical protein phrog_2436 unknown function unknown function -1 38514 38663
AMW64271.1 KU985095_p14 portal phrog_104 portal protein head and packaging 1 9611 11086
AMW64331.1 KU985095_p74 hypothetical protein phrog_1562 unknown function unknown function -1 45800 46219
AMW64344.1 KU985095_p87 hypothetical protein phrog_2355 unknown function unknown function -1 50139 50564
AMW64293.1 KU985095_p36 hypothetical protein phrog_733 excisionase integration and excision 1 28511 28951
AMW64277.1 KU985095_p20 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 14145 14339
AMW64332.1 KU985095_p75 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 46281 46976
AMW64294.1 KU985095_p37 hypothetical protein phrog_549 unknown function unknown function 1 28998 29381
AMW64322.1 KU985095_p65 esterase/lipase phrog_789 esterase/lipase other -1 41613 42452
AMW64269.1 KU985095_p12 lysin B phrog_102 endolysin lysis 1 6810 7802
AMW64345.1 KU985095_p88 hypothetical protein phrog_586 unknown function unknown function -1 50591 50944
AMW64267.1 KU985095_p10 lysin A phrog_317 endolysin lysis 1 5066 6376
AMW64288.1 KU985095_p31 hypothetical protein phrog_404 minor tail protein tail 1 22832 23176
AMW64312.1 KU985095_p55 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 37846 38514
AMW64303.1 KU985095_p46 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 31417 33204
AMW64296.1 KU985095_p39 hypothetical protein phrog_9463 unknown function unknown function -1 29644 29841
AMW64284.1 KU985095_p27 tape measure protein phrog_305 tail length tape measure protein tail 1 17023 19566
AMW64339.1 KU985095_p82 hypothetical protein phrog_1477 unknown function unknown function -1 48448 48579
AMW64266.1 KU985095_p9 hypothetical protein phrog_1087 unknown function unknown function 1 4908 5066
AMW64275.1 KU985095_p18 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 13586 13768
AMW64297.1 KU985095_p40 hypothetical protein phrog_542 unknown function unknown function -1 29841 30014
AMW64298.1 KU985095_p41 hypothetical protein phrog_383 unknown function unknown function -1 30011 30394
AMW64349.1 KU985095_p92 hypothetical protein phrog_1392 unknown function unknown function -1 51562 52272
AMW64282.1 KU985095_p26 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16201 16608
AMW64287.1 KU985095_p30 hypothetical protein phrog_352 minor tail protein tail 1 22389 22835
AMW64340.1 KU985095_p83 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 48579 48884
AMW64342.1 KU985095_p85 hypothetical protein phrog_855 unknown function unknown function -1 49636 49770
AMW64299.1 KU985095_p42 hypothetical protein phrog_2099 unknown function unknown function -1 30391 30657
AMW64292.1 KU985095_p35 integrase phrog_1 integrase integration and excision -1 27003 28148
AMW64285.1 KU985095_p28 minor tail subunit phrog_106 minor tail protein tail 1 19587 20603
AMW64323.1 KU985095_p66 hypothetical protein phrog_1123 unknown function unknown function -1 42449 42706
AMW64326.1 KU985095_p69 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 43412 44218
AMW64330.1 KU985095_p73 RecB family endonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44904 45803
AMW64295.1 KU985095_p38 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 29474 29644
AMW64258.1 KU985095_p1 hypothetical protein phrog_7736 unknown function unknown function 1 328 441
AMW64279.1 KU985095_p22 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 14704 15039
AMW64309.1 KU985095_p52 ribonucleoside reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 35425 37464
AMW64325.1 KU985095_p68 hypothetical protein phrog_5101 unknown function unknown function -1 43073 43378
AMW64314.1 KU985095_p57 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 38667 39437
AMW64316.1 KU985095_p59 NrdH-like redoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 39754 40026
AMW64350.1 KU985095_p93 hypothetical protein phrog_1445 unknown function unknown function -1 52272 52355
AMW64260.1 KU985095_p3 VIP2 toxin phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1331 2260
AMW64276.1 KU985095_p19 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13771 14148
AMW64333.1 KU985095_p76 hypothetical protein phrog_1173 unknown function unknown function -1 47095 47352
AMW64274.1 KU985095_p17 major capsid protein phrog_10 major head protein head and packaging 1 12560 13516
AMW64265.1 KU985095_p8 hypothetical protein phrog_5972 unknown function unknown function 1 4517 4771
AMW64335.1 KU985095_p78 hypothetical protein phrog_8490 unknown function unknown function -1 47555 47695
AMW64290.1 KU985095_p33 hypothetical protein phrog_416 minor tail protein tail 1 25662 26558
AMW64280.1 KU985095_p23 head-to-tail connector protein phrog_123 tail terminator connector 1 15049 15486
AMW64310.1 KU985095_p53 hypothetical protein phrog_2046 unknown function unknown function -1 37464 37667