| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX011028 |
Definition |
Staphylococcus phage pSco-10, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Kayvirus; unclassified Kayvirus. |
DB of origin |
NUCCORE |
Length |
101986 |
Host Name |
Staphylococcus cohnii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
131 |
%GC |
31.11 |
Number of singletons |
2 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANH50434.1 | KX011028_p23 | hypothetical protein | phrog_3128 | unknown function | unknown function | -1 | 10694 | 10990 |
| ANH50436.1 | KX011028_p25 | hypothetical protein | phrog_4009 | unknown function | unknown function | -1 | 11171 | 11419 |
| ANH50483.1 | KX011028_p72 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 41484 | 42551 |
| ANH50536.1 | KX011028_p125 | terminase | phrog_675 | terminase large subunit | head and packaging | -1 | 98002 | 99054 |
| ANH50539.1 | KX011028_p128 | membrane protein | phrog_5547 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 99732 | 99998 |
| ANH50444.1 | KX011028_p33 | hypothetical protein | phrog_2726 | unknown function | unknown function | -1 | 14255 | 14965 |
| ANH50525.1 | KX011028_p114 | hypothetical protein | phrog_9084 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 89754 | 90278 |
| ANH50491.1 | KX011028_p80 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 50207 | 51955 |
| ANH50512.1 | KX011028_p101 | hypothetical protein | phrog_2701 | unknown function | unknown function | -1 | 78204 | 78341 |
| ANH50481.1 | KX011028_p70 | hypothetical protein | phrog_1095 | unknown function | unknown function | -1 | 40626 | 41078 |
| ANH50416.1 | KX011028_p5 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 3736 | 4515 |
| ANH50414.1 | KX011028_p3 | hypothetical protein | phrog_23628 | unknown function | unknown function | -1 | 2715 | 3050 |
| ANH50517.1 | KX011028_p106 | hypothetical protein | phrog_1000 | unknown function | unknown function | -1 | 82644 | 83480 |
| ANH50493.1 | KX011028_p82 | hypothetical protein | phrog_2671 | tail fiber protein | tail | -1 | 53424 | 53798 |
| ANH50468.1 | KX011028_p57 | DNA polymerase | phrog_4008 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 31783 | 32655 |
| ANH50469.1 | KX011028_p58 | hypothetical protein | phrog_379 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32731 | 33036 |
| ANH50494.1 | KX011028_p83 | capsid and scaffold protein | phrog_2665 | virion structural protein | head and packaging | -1 | 53812 | 55725 |
| ANH50427.1 | KX011028_p16 | hypothetical protein | phrog_467 | unknown function | unknown function | -1 | 8312 | 8740 |
| ANH50423.1 | KX011028_p12 | hypothetical protein | phrog_22787 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 7111 | 7341 |
| ANH50518.1 | KX011028_p107 | hypothetical protein | phrog_1127 | unknown function | unknown function | -1 | 83499 | 84119 |
| ANH50438.1 | KX011028_p27 | hypothetical protein | phrog_6850 | unknown function | unknown function | -1 | 12160 | 12372 |
| ANH50475.1 | KX011028_p64 | endonuclease | phrog_314 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36764 | 37345 |
| ANH50486.1 | KX011028_p75 | exonuclease | phrog_77 | SbcC-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 43743 | 45662 |
| ANH50527.1 | KX011028_p116 | portal protein | phrog_12 | portal protein | head and packaging | -1 | 90699 | 92393 |
| ANH50524.1 | KX011028_p113 | prohead protease | phrog_1028 | head maturation protease | head and packaging | -1 | 88787 | 89560 |
| ANH50515.1 | KX011028_p104 | major tail sheath protein | phrog_279 | tail sheath | tail | -1 | 80637 | 82400 |
| ANH50497.1 | KX011028_p86 | structural protein | phrog_1394 | virion structural protein | head and packaging | -1 | 59410 | 59931 |
| ANH50534.1 | KX011028_p123 | terminase | phrog_675 | terminase large subunit | head and packaging | -1 | 95954 | 96724 |
| ANH50425.1 | KX011028_p14 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7950 | 8129 |
| ANH50506.1 | KX011028_p95 | tail lysin | phrog_1047 | tail associated lysin | tail | -1 | 71769 | 75896 |
| ANH50443.1 | KX011028_p32 | membrane protein | phrog_2863 | unknown function | unknown function | -1 | 13793 | 14191 |
| ANH50477.1 | KX011028_p66 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 38095 | 38763 |
| ANH50495.1 | KX011028_p84 | hypothetical protein | phrog_1074 | unknown function | unknown function | -1 | 55726 | 55884 |
| ANH50532.1 | KX011028_p121 | hypothetical protein | phrog_3863 | unknown function | unknown function | -1 | 94980 | 95153 |
| ANH50489.1 | KX011028_p78 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 47147 | 48589 |
| ANH50521.1 | KX011028_p110 | hypothetical protein | phrog_1205 | unknown function | unknown function | -1 | 85932 | 86228 |
| ANH50490.1 | KX011028_p79 | replication protein | phrog_1098 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 48582 | 50195 |
| ANH50474.1 | KX011028_p63 | ribonucleotide reductase | phrog_3844 | NrdA-like aerobic NDP reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 35564 | 36346 |
| ANH50439.1 | KX011028_p28 | hypothetical protein | phrog_6867 | unknown function | unknown function | -1 | 12386 | 12634 |
| ANH50430.1 | KX011028_p19 | membrane protein | phrog_3804 | unknown function | unknown function | -1 | 9480 | 9752 |
| ANH50487.1 | KX011028_p76 | hypothetical protein | phrog_2773 | unknown function | unknown function | -1 | 45662 | 46039 |
| ANH50431.1 | KX011028_p20 | hypothetical protein | phrog_2988 | unknown function | unknown function | -1 | 9758 | 10105 |
| ANH50500.1 | KX011028_p89 | baseplate protein | phrog_975 | baseplate protein | tail | -1 | 63682 | 64386 |
| ANH50496.1 | KX011028_p85 | tail protein | phrog_877 | unknown function | unknown function | -1 | 55928 | 59389 |
| ANH50428.1 | KX011028_p17 | hypothetical protein | phrog_3752 | unknown function | unknown function | -1 | 8740 | 9090 |
| ANH50452.1 | KX011028_p41 | hypothetical protein | phrog_3644 | unknown function | unknown function | -1 | 19703 | 20014 |
| ANH50472.1 | KX011028_p61 | hypothetical protein | phrog_2797 | unknown function | unknown function | -1 | 34154 | 34483 |
| ANH50433.1 | KX011028_p22 | membrane protein | phrog_3640 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 10459 | 10641 |
| ANH50463.1 | KX011028_p52 | hypothetical protein | phrog_2672 | unknown function | unknown function | -1 | 26606 | 27778 |
| ANH50473.1 | KX011028_p62 | ribonucleotide reductase | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 34501 | 35550 |
| ANH50523.1 | KX011028_p112 | hypothetical protein | phrog_1133 | unknown function | unknown function | -1 | 87827 | 88768 |
| ANH50461.1 | KX011028_p50 | hypothetical protein | phrog_1089 | unknown function | unknown function | -1 | 24933 | 25286 |
| ANH50501.1 | KX011028_p90 | structural protein | phrog_1073 | unknown function | unknown function | -1 | 64386 | 64910 |
| ANH50456.1 | KX011028_p45 | hypothetical protein | phrog_2673 | unknown function | unknown function | -1 | 22385 | 22645 |
| ANH50466.1 | KX011028_p55 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28675 | 30969 |
| ANH50529.1 | KX011028_p118 | membrane protein | phrog_7555 | unknown function | unknown function | -1 | 92774 | 92968 |
| ANH50426.1 | KX011028_p15 | hypothetical protein | phrog_3701 | unknown function | unknown function | -1 | 8132 | 8311 |
| ANH50537.1 | KX011028_p126 | hypothetical protein | phrog_1063 | terminase small subunit | head and packaging | -1 | 99069 | 99479 |
| ANH50471.1 | KX011028_p60 | thioredoxin-like protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 33850 | 34170 |
| ANH50465.1 | KX011028_p54 | hypothetical protein | phrog_3621 | unknown function | unknown function | -1 | 28364 | 28606 |
| ANH50514.1 | KX011028_p103 | tail protein | phrog_985 | virion structural protein | head and packaging | -1 | 80220 | 80564 |
| ANH50420.1 | KX011028_p9 | hypothetical protein | phrog_654 | unknown function | unknown function | -1 | 5762 | 6067 |
| ANH50502.1 | KX011028_p91 | structural protein | phrog_1011 | virion structural protein | head and packaging | -1 | 64910 | 65701 |
| ANH50457.1 | KX011028_p46 | major tail protein | phrog_1696 | major tail protein | tail | -1 | 22741 | 22977 |
| ANH50419.1 | KX011028_p8 | hypothetical protein | phrog_6562 | unknown function | unknown function | -1 | 5355 | 5762 |
| ANH50478.1 | KX011028_p67 | ribonucleotide reductase | phrog_6132 | ribonucleotide reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 38882 | 39607 |
| ANH50541.1 | KX011028_p130 | hypothetical protein | phrog_937 | hemolysin | other | 1 | 100896 | 101228 |
| ANH50503.1 | KX011028_p92 | structural protein | phrog_2204 | glycerophosphoryl diester phosphodiesterase | other | -1 | 65808 | 68363 |
| ANH50445.1 | KX011028_p34 | hypothetical protein | phrog_1303 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 14982 | 15425 |
| ANH50455.1 | KX011028_p44 | hypothetical protein | phrog_2721 | unknown function | unknown function | -1 | 21626 | 22381 |
| ANH50479.1 | KX011028_p68 | ribonucleotide reductase | phrog_883 | flavodoxin | moron, auxiliary metabolic gene and host takeover | -1 | 39622 | 40014 |
| ANH50453.1 | KX011028_p42 | membrane protein | phrog_2892 | unknown function | unknown function | -1 | 20001 | 20369 |
| ANH50447.1 | KX011028_p36 | hypothetical protein | phrog_1007 | unknown function | unknown function | -1 | 15966 | 16697 |
| ANH50511.1 | KX011028_p100 | hypothetical protein | phrog_1905 | unknown function | unknown function | -1 | 77709 | 78161 |
| ANH50462.1 | KX011028_p51 | DNA repair protein | phrog_97 | UvsX-like recombinase | other | -1 | 25290 | 26546 |
| ANH50437.1 | KX011028_p26 | membrane protein | phrog_3854 | ribulose-1;5-bisphosphate carboxylase/oxygenase small subunit | moron, auxiliary metabolic gene and host takeover | -1 | 11436 | 12080 |
| ANH50492.1 | KX011028_p81 | tail fiber protein | phrog_2691 | tail fiber protein | tail | -1 | 52044 | 53417 |
| ANH50435.1 | KX011028_p24 | hypothetical protein | phrog_3524 | unknown function | unknown function | -1 | 10983 | 11159 |
| ANH50415.1 | KX011028_p4 | hypothetical protein | phrog_4637 | unknown function | unknown function | -1 | 3336 | 3704 |
| ANH50507.1 | KX011028_p96 | tail morphogenetic protein | phrog_1316 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | -1 | 75952 | 76488 |
| ANH50533.1 | KX011028_p122 | structural protein | phrog_1917 | virion structural protein | head and packaging | -1 | 95140 | 95940 |
| ANH50498.1 | KX011028_p87 | tail morphogenetic protein | phrog_2386 | virion structural protein | head and packaging | -1 | 60042 | 62600 |
| ANH50542.1 | KX011028_p131 | hypothetical protein | phrog_1215 | unknown function | unknown function | 1 | 101241 | 101450 |
| ANH50417.1 | KX011028_p6 | hypothetical protein | phrog_7235 | unknown function | unknown function | -1 | 4574 | 4768 |
| ANH50413.1 | KX011028_p2 | hypothetical protein | phrog_4538 | unknown function | unknown function | -1 | 1154 | 2635 |
| ANH50485.1 | KX011028_p74 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 43162 | 43743 |
| ANH50519.1 | KX011028_p108 | capsid protein | phrog_1004 | virion structural protein | head and packaging | -1 | 84119 | 84997 |
| ANH50520.1 | KX011028_p109 | hypothetical protein | phrog_772 | tail fiber protein | tail | -1 | 85011 | 85919 |
| ANH50528.1 | KX011028_p117 | portal protein | phrog_1108 | portal protein | head and packaging | -1 | 92397 | 92768 |
| ANH50531.1 | KX011028_p120 | hypothetical protein | phrog_1116 | unknown function | unknown function | -1 | 94504 | 94983 |
| ANH50442.1 | KX011028_p31 | hypothetical protein | phrog_3157 | unknown function | unknown function | -1 | 13401 | 13643 |
| ANH50464.1 | KX011028_p53 | hypothetical protein | phrog_1069 | unknown function | unknown function | -1 | 27865 | 28347 |
| ANH50538.1 | KX011028_p127 | hypothetical protein | phrog_1321 | unknown function | unknown function | -1 | 99476 | 99754 |
| ANH50460.1 | KX011028_p49 | RNA polymerase | phrog_1025 | RNA polymerase sigma factor | transcription regulation | -1 | 24284 | 24946 |
| ANH50449.1 | KX011028_p38 | hypothetical protein | phrog_2356 | unknown function | unknown function | -1 | 17919 | 18365 |
| ANH50446.1 | KX011028_p35 | hypothetical protein | phrog_1104 | virion structural protein | head and packaging | -1 | 15490 | 15948 |
| ANH50516.1 | KX011028_p105 | hypothetical protein | phrog_1151 | unknown function | unknown function | -1 | 82427 | 82642 |
| ANH50522.1 | KX011028_p111 | capsid protein | phrog_752 | major head protein | head and packaging | -1 | 86320 | 87711 |
| ANH50459.1 | KX011028_p48 | Ig-like protein | phrog_1240 | Ig domain containing protein | other | -1 | 23525 | 24157 |
| ANH50421.1 | KX011028_p10 | hypothetical protein | phrog_14215 | unknown function | unknown function | -1 | 6145 | 6810 |
| ANH50499.1 | KX011028_p88 | tail protein | phrog_6 | baseplate wedge subunit | tail | -1 | 62621 | 63667 |
| ANH50451.1 | KX011028_p40 | hypothetical protein | phrog_1080 | unknown function | unknown function | -1 | 19103 | 19639 |
| ANH50418.1 | KX011028_p7 | hypothetical protein | phrog_547 | phosphoesterase | other | -1 | 4846 | 5352 |
| ANH50484.1 | KX011028_p73 | hypothetical protein | phrog_1070 | anti-sigma factor | moron, auxiliary metabolic gene and host takeover | -1 | 42566 | 43162 |
| ANH50480.1 | KX011028_p69 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 40031 | 40639 |
| ANH50509.1 | KX011028_p98 | hypothetical protein | phrog_2754 | virion structural protein | head and packaging | -1 | 77120 | 77431 |
| ANH50540.1 | KX011028_p129 | membrane protein | phrog_1481 | unknown function | unknown function | 1 | 100557 | 100883 |
| ANH50440.1 | KX011028_p29 | hypothetical protein | phrog_3664 | DNA sliding clamp inhibitor; arrest of S.aureus DNA synthesis | DNA, RNA and nucleotide metabolism | -1 | 12627 | 12803 |
| ANH50482.1 | KX011028_p71 | hypothetical protein | phrog_1291 | unknown function | unknown function | -1 | 41078 | 41416 |
| ANH50467.1 | KX011028_p56 | hypothetical protein | phrog_2340 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 31105 | 31617 |
| ANH50448.1 | KX011028_p37 | hypothetical protein | phrog_1113 | unknown function | unknown function | -1 | 17056 | 17919 |
| ANH50530.1 | KX011028_p119 | membrane protein | phrog_3094 | unknown function | unknown function | -1 | 93206 | 94411 |
| ANH50526.1 | KX011028_p115 | homing endonuclease | singleton | unknown function | unknown function | -1 | 90259 | 90678 |
| ANH50450.1 | KX011028_p39 | hypothetical protein | phrog_984 | unknown function | unknown function | -1 | 18343 | 19110 |
| ANH50505.1 | KX011028_p94 | tail lysin | phrog_1015 | tail protein with lysin activity | tail | -1 | 69264 | 71690 |
| ANH50422.1 | KX011028_p11 | hypothetical protein | phrog_4584 | carboxypeptidase | other | -1 | 6827 | 7099 |
| ANH50513.1 | KX011028_p102 | intron-encoded nuclease | phrog_7140 | intron encoded nuclease | DNA, RNA and nucleotide metabolism | -1 | 78395 | 79399 |
| ANH50454.1 | KX011028_p43 | DNA repair exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 20383 | 21633 |
| ANH50424.1 | KX011028_p13 | membrane protein | phrog_1486 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 7343 | 7753 |
| ANH50458.1 | KX011028_p47 | major tail protein | phrog_341 | major tail protein | tail | -1 | 22992 | 23504 |
| ANH50535.1 | KX011028_p124 | homing endonuclease | phrog_559 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 96809 | 97747 |
| ANH50476.1 | KX011028_p65 | ribonucleotide reductase | phrog_22953 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 37456 | 37845 |
| ANH50470.1 | KX011028_p59 | hypothetical protein | phrog_1054 | unknown function | unknown function | -1 | 33046 | 33642 |
| ANH50441.1 | KX011028_p30 | hypothetical protein | phrog_5958 | unknown function | unknown function | -1 | 12839 | 13396 |
| ANH50508.1 | KX011028_p97 | hypothetical protein | phrog_1038 | tail assembly chaperone | tail | -1 | 76532 | 76987 |
| ANH50412.1 | KX011028_p1 | hypothetical protein | phrog_16491 | unknown function | unknown function | -1 | 79 | 630 |
| ANH50429.1 | KX011028_p18 | hypothetical protein | phrog_3143 | unknown function | unknown function | -1 | 9105 | 9410 |
| ANH50504.1 | KX011028_p93 | tail protein | phrog_2677 | tail protein with lysin activity | tail | -1 | 68363 | 69250 |
| ANH50488.1 | KX011028_p77 | exonuclease | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 46039 | 47067 |
| ANH50510.1 | KX011028_p99 | membrane protein | phrog_4320 | unknown function | unknown function | -1 | 77502 | 77696 |
| ANH50432.1 | KX011028_p21 | hypothetical protein | phrog_3669 | unknown function | unknown function | -1 | 10118 | 10444 |