| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX077896 |
Definition |
Streptococcus phage phiJH1301-2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
67195 |
Host Name |
Streptococcus suis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
38.63 |
Number of singletons |
11 |
Number of paralogs |
6 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANM47648.1 | KX077896_p17 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 12457 | 12663 |
| ANM47704.1 | KX077896_p73 | ubiquinone/menaquinone biosynthesis | phrog_4752 | tRNA methyltransferase | other | -1 | 62069 | 62803 |
| ANM47701.1 | KX077896_p70 | transposase | phrog_11704 | transposase | integration and excision | -1 | 59055 | 60374 |
| ANM47651.1 | KX077896_p20 | tail length tape-measure protein | phrog_58 | tail length tape measure protein | tail | -1 | 17944 | 20802 |
| ANM47699.1 | KX077896_p68 | hypothetical protein | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 56378 | 57232 |
| ANM47671.1 | KX077896_p40 | holin | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 34311 | 34676 |
| ANM47660.1 | KX077896_p29 | portal protein | phrog_12 | portal protein | head and packaging | -1 | 25191 | 26474 |
| ANM47646.1 | KX077896_p15 | holin | phrog_199 | holin | lysis | -1 | 11710 | 12105 |
| ANM47659.1 | KX077896_p28 | Clp protease-like protein | phrog_94 | head maturation protease | head and packaging | -1 | 24503 | 25198 |
| ANM47678.1 | KX077896_p47 | DNA primase/helicase | phrog_1883 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 39001 | 41286 |
| ANM47633.1 | KX077896_p2 | histone acetyltransferase HPA2 | phrog_1249 | acetyltransferase | other | -1 | 1957 | 2412 |
| ANM47635.1 | KX077896_p4 | methyltransferase | phrog_4752 | tRNA methyltransferase | other | -1 | 3318 | 4043 |
| ANM47692.1 | KX077896_p61 | hypothetical protein | phrog_38272 | unknown function | unknown function | -1 | 52473 | 52736 |
| ANM47675.1 | KX077896_p44 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 36582 | 37085 |
| ANM47662.1 | KX077896_p31 | prevent host death protein | phrog_2194 | unknown function | unknown function | -1 | 26983 | 27240 |
| ANM47702.1 | KX077896_p71 | adenine phosphoribosyltransferase | singleton | unknown function | unknown function | -1 | 60602 | 61129 |
| ANM47669.1 | KX077896_p38 | adenine-specific methyltransferase | phrog_498 | DNA methyltransferase | other | -1 | 31468 | 33579 |
| ANM47706.1 | KX077896_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65278 | 65448 |
| ANM47634.1 | KX077896_p3 | acetyltransferase | phrog_1249 | acetyltransferase | other | -1 | 2426 | 2926 |
| ANM47642.1 | KX077896_p11 | hypothetical protein | singleton | unknown function | unknown function | -1 | 6980 | 7393 |
| ANM47679.1 | KX077896_p48 | hypothetical protein | phrog_3280 | unknown function | unknown function | 1 | 41576 | 41710 |
| ANM47700.1 | KX077896_p69 | DNA topoisomerase III | singleton | unknown function | unknown function | -1 | 57377 | 58864 |
| ANM47657.1 | KX077896_p26 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | -1 | 23019 | 23276 |
| ANM47694.1 | KX077896_p63 | mobile element protein | phrog_11688 | transposase | integration and excision | 1 | 53727 | 54011 |
| ANM47643.1 | KX077896_p12 | site-specific recombinase | phrog_95 | integrase | integration and excision | -1 | 7514 | 8806 |
| ANM47665.1 | KX077896_p34 | hypothetical protein | phrog_4709 | unknown function | unknown function | -1 | 29424 | 29654 |
| ANM47683.1 | KX077896_p52 | hypothetical protein | phrog_2442 | unknown function | unknown function | 1 | 43694 | 43861 |
| ANM47645.1 | KX077896_p14 | cell wall hydrolase | phrog_2742 | endolysin | lysis | -1 | 10234 | 11703 |
| ANM47670.1 | KX077896_p39 | zinc-finger protein | phrog_2308 | unknown function | unknown function | -1 | 33551 | 34012 |
| ANM47707.1 | KX077896_p76 | TrmA family RNA methyltransferase | phrog_11787 | DNA methyltransferase | other | -1 | 65840 | 67195 |
| ANM47632.1 | KX077896_p1 | phosphoglucomutase | phrog_20109 | unknown function | unknown function | 1 | 1 | 1719 |
| ANM47695.1 | KX077896_p64 | hypothetical protein | phrog_29599 | unknown function | unknown function | -1 | 54141 | 55580 |
| ANM47691.1 | KX077896_p60 | mobile element protein | phrog_157 | transposase | integration and excision | -1 | 51601 | 52281 |
| ANM47672.1 | KX077896_p41 | S-adenosylmethionine synthetase | phrog_1569 | unknown function | unknown function | -1 | 34678 | 35850 |
| ANM47644.1 | KX077896_p13 | recombinase | phrog_95 | integrase | integration and excision | -1 | 8769 | 10010 |
| ANM47703.1 | KX077896_p72 | aminoglycoside 6-adenylyltansferase | phrog_18605 | unknown function | unknown function | -1 | 61173 | 62036 |
| ANM47655.1 | KX077896_p24 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 22320 | 22688 |
| ANM47661.1 | KX077896_p30 | death on curing protein, Doc toxin | phrog_577 | Doc-like toxin | moron, auxiliary metabolic gene and host takeover | -1 | 26615 | 26986 |
| ANM47650.1 | KX077896_p19 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | -1 | 17225 | 17947 |
| ANM47680.1 | KX077896_p49 | hypothetical protein | phrog_408 | unknown function | unknown function | 1 | 41685 | 42008 |
| ANM47658.1 | KX077896_p27 | major capsid protein | phrog_10 | major head protein | head and packaging | -1 | 23279 | 24484 |
| ANM47705.1 | KX077896_p74 | macrolide-efflux protein, framshift | phrog_28438 | unknown function | unknown function | -1 | 62784 | 63653 |
| ANM47686.1 | KX077896_p55 | hypothetical protein | phrog_4031 | unknown function | unknown function | -1 | 46870 | 48756 |
| ANM47668.1 | KX077896_p37 | DNA-cytosine methyltransferase | phrog_116 | DNA methyltransferase | other | -1 | 30191 | 31471 |
| ANM47673.1 | KX077896_p42 | hypothetical protein | phrog_2555 | unknown function | unknown function | -1 | 35898 | 36113 |
| ANM47689.1 | KX077896_p58 | hypothetical protein | phrog_38272 | unknown function | unknown function | -1 | 50094 | 50321 |
| ANM47656.1 | KX077896_p25 | hypothetical protein | phrog_25 | head closure Hc1 | connector | -1 | 22681 | 23019 |
| ANM47681.1 | KX077896_p50 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42001 | 43122 |
| ANM47640.1 | KX077896_p9 | EsaC protein-like protein | phrog_14657 | unknown function | unknown function | -1 | 5792 | 6085 |
| ANM47641.1 | KX077896_p10 | hypothetical protein | phrog_31733 | unknown function | unknown function | -1 | 6099 | 6977 |
| ANM47685.1 | KX077896_p54 | hypothetical protein | phrog_2513 | unknown function | unknown function | -1 | 45904 | 46473 |
| ANM47677.1 | KX077896_p46 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 38435 | 38716 |
| ANM47637.1 | KX077896_p6 | site-specific recombinase | singleton | unknown function | unknown function | -1 | 4804 | 4980 |
| ANM47676.1 | KX077896_p45 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 37078 | 38454 |
| ANM47688.1 | KX077896_p57 | mobile element protein | phrog_157 | transposase | integration and excision | -1 | 49222 | 49902 |
| ANM47687.1 | KX077896_p56 | pleiotropic regulator of exopolysaccharide | phrog_3 | transcriptional repressor | transcription regulation | 1 | 48886 | 49188 |
| ANM47652.1 | KX077896_p21 | hypothetical protein | phrog_709 | unknown function | unknown function | -1 | 20985 | 21404 |
| ANM47639.1 | KX077896_p8 | pleiotropic regulator of exopolysaccharide | singleton | unknown function | unknown function | 1 | 5176 | 5481 |
| ANM47649.1 | KX077896_p18 | endopeptidase | phrog_1330 | tail protein | tail | -1 | 12676 | 17223 |
| ANM47693.1 | KX077896_p62 | MutR family positive transcriptional regulator | singleton | unknown function | unknown function | -1 | 52991 | 53563 |
| ANM47664.1 | KX077896_p33 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | -1 | 28900 | 29373 |
| ANM47690.1 | KX077896_p59 | chloramphenicol acetyltransferase | phrog_12857 | unknown function | unknown function | 1 | 50288 | 50992 |
| ANM47653.1 | KX077896_p22 | hypothetical protein | phrog_88 | major tail protein | tail | -1 | 21416 | 21985 |
| ANM47638.1 | KX077896_p7 | site-specific recombinase | singleton | unknown function | unknown function | -1 | 4958 | 5182 |
| ANM47682.1 | KX077896_p51 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43127 | 43675 |
| ANM47697.1 | KX077896_p66 | epsilon antitoxin | singleton | unknown function | unknown function | -1 | 55922 | 56047 |
| ANM47663.1 | KX077896_p32 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | -1 | 27311 | 28903 |
| ANM47636.1 | KX077896_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4040 | 4663 |
| ANM47696.1 | KX077896_p65 | GNAT family acetyltransferase | phrog_21214 | acetyltransferase | other | -1 | 55581 | 55946 |
| ANM47666.1 | KX077896_p35 | hypothetical protein | phrog_3782 | unknown function | unknown function | -1 | 29656 | 29868 |
| ANM47667.1 | KX077896_p36 | hypothetical protein | phrog_6231 | unknown function | unknown function | -1 | 29870 | 30151 |
| ANM47674.1 | KX077896_p43 | hypothetical protein | phrog_4709 | unknown function | unknown function | -1 | 36169 | 36396 |
| ANM47698.1 | KX077896_p67 | transcriptional regulator | singleton | unknown function | unknown function | -1 | 56064 | 56273 |
| ANM47647.1 | KX077896_p16 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 12083 | 12451 |
| ANM47654.1 | KX077896_p23 | hypothetical protein | phrog_78 | tail terminator | connector | -1 | 21987 | 22313 |
| ANM47684.1 | KX077896_p53 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 43910 | 45865 |