Genomic map of Streptococcus phage phiJH1301-2 (KX077896)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX077896
Definition
Streptococcus phage phiJH1301-2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
67195
Host Name
Streptococcus suis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
38.63
Number of singletons
11
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANM47648.1 KX077896_p17 hypothetical protein phrog_1137 unknown function unknown function -1 12457 12663
ANM47704.1 KX077896_p73 ubiquinone/menaquinone biosynthesis phrog_4752 tRNA methyltransferase other -1 62069 62803
ANM47701.1 KX077896_p70 transposase phrog_11704 transposase integration and excision -1 59055 60374
ANM47651.1 KX077896_p20 tail length tape-measure protein phrog_58 tail length tape measure protein tail -1 17944 20802
ANM47699.1 KX077896_p68 hypothetical protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism -1 56378 57232
ANM47671.1 KX077896_p40 holin phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism -1 34311 34676
ANM47660.1 KX077896_p29 portal protein phrog_12 portal protein head and packaging -1 25191 26474
ANM47646.1 KX077896_p15 holin phrog_199 holin lysis -1 11710 12105
ANM47659.1 KX077896_p28 Clp protease-like protein phrog_94 head maturation protease head and packaging -1 24503 25198
ANM47678.1 KX077896_p47 DNA primase/helicase phrog_1883 DNA helicase DNA, RNA and nucleotide metabolism -1 39001 41286
ANM47633.1 KX077896_p2 histone acetyltransferase HPA2 phrog_1249 acetyltransferase other -1 1957 2412
ANM47635.1 KX077896_p4 methyltransferase phrog_4752 tRNA methyltransferase other -1 3318 4043
ANM47692.1 KX077896_p61 hypothetical protein phrog_38272 unknown function unknown function -1 52473 52736
ANM47675.1 KX077896_p44 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 36582 37085
ANM47662.1 KX077896_p31 prevent host death protein phrog_2194 unknown function unknown function -1 26983 27240
ANM47702.1 KX077896_p71 adenine phosphoribosyltransferase singleton unknown function unknown function -1 60602 61129
ANM47669.1 KX077896_p38 adenine-specific methyltransferase phrog_498 DNA methyltransferase other -1 31468 33579
ANM47706.1 KX077896_p75 hypothetical protein singleton unknown function unknown function -1 65278 65448
ANM47634.1 KX077896_p3 acetyltransferase phrog_1249 acetyltransferase other -1 2426 2926
ANM47642.1 KX077896_p11 hypothetical protein singleton unknown function unknown function -1 6980 7393
ANM47679.1 KX077896_p48 hypothetical protein phrog_3280 unknown function unknown function 1 41576 41710
ANM47700.1 KX077896_p69 DNA topoisomerase III singleton unknown function unknown function -1 57377 58864
ANM47657.1 KX077896_p26 hypothetical protein phrog_40 head-tail adaptor Ad1 connector -1 23019 23276
ANM47694.1 KX077896_p63 mobile element protein phrog_11688 transposase integration and excision 1 53727 54011
ANM47643.1 KX077896_p12 site-specific recombinase phrog_95 integrase integration and excision -1 7514 8806
ANM47665.1 KX077896_p34 hypothetical protein phrog_4709 unknown function unknown function -1 29424 29654
ANM47683.1 KX077896_p52 hypothetical protein phrog_2442 unknown function unknown function 1 43694 43861
ANM47645.1 KX077896_p14 cell wall hydrolase phrog_2742 endolysin lysis -1 10234 11703
ANM47670.1 KX077896_p39 zinc-finger protein phrog_2308 unknown function unknown function -1 33551 34012
ANM47707.1 KX077896_p76 TrmA family RNA methyltransferase phrog_11787 DNA methyltransferase other -1 65840 67195
ANM47632.1 KX077896_p1 phosphoglucomutase phrog_20109 unknown function unknown function 1 1 1719
ANM47695.1 KX077896_p64 hypothetical protein phrog_29599 unknown function unknown function -1 54141 55580
ANM47691.1 KX077896_p60 mobile element protein phrog_157 transposase integration and excision -1 51601 52281
ANM47672.1 KX077896_p41 S-adenosylmethionine synthetase phrog_1569 unknown function unknown function -1 34678 35850
ANM47644.1 KX077896_p13 recombinase phrog_95 integrase integration and excision -1 8769 10010
ANM47703.1 KX077896_p72 aminoglycoside 6-adenylyltansferase phrog_18605 unknown function unknown function -1 61173 62036
ANM47655.1 KX077896_p24 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 22320 22688
ANM47661.1 KX077896_p30 death on curing protein, Doc toxin phrog_577 Doc-like toxin moron, auxiliary metabolic gene and host takeover -1 26615 26986
ANM47650.1 KX077896_p19 hypothetical protein phrog_33 distal tail protein Dit tail -1 17225 17947
ANM47680.1 KX077896_p49 hypothetical protein phrog_408 unknown function unknown function 1 41685 42008
ANM47658.1 KX077896_p27 major capsid protein phrog_10 major head protein head and packaging -1 23279 24484
ANM47705.1 KX077896_p74 macrolide-efflux protein, framshift phrog_28438 unknown function unknown function -1 62784 63653
ANM47686.1 KX077896_p55 hypothetical protein phrog_4031 unknown function unknown function -1 46870 48756
ANM47668.1 KX077896_p37 DNA-cytosine methyltransferase phrog_116 DNA methyltransferase other -1 30191 31471
ANM47673.1 KX077896_p42 hypothetical protein phrog_2555 unknown function unknown function -1 35898 36113
ANM47689.1 KX077896_p58 hypothetical protein phrog_38272 unknown function unknown function -1 50094 50321
ANM47656.1 KX077896_p25 hypothetical protein phrog_25 head closure Hc1 connector -1 22681 23019
ANM47681.1 KX077896_p50 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 42001 43122
ANM47640.1 KX077896_p9 EsaC protein-like protein phrog_14657 unknown function unknown function -1 5792 6085
ANM47641.1 KX077896_p10 hypothetical protein phrog_31733 unknown function unknown function -1 6099 6977
ANM47685.1 KX077896_p54 hypothetical protein phrog_2513 unknown function unknown function -1 45904 46473
ANM47677.1 KX077896_p46 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 38435 38716
ANM47637.1 KX077896_p6 site-specific recombinase singleton unknown function unknown function -1 4804 4980
ANM47676.1 KX077896_p45 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 37078 38454
ANM47688.1 KX077896_p57 mobile element protein phrog_157 transposase integration and excision -1 49222 49902
ANM47687.1 KX077896_p56 pleiotropic regulator of exopolysaccharide phrog_3 transcriptional repressor transcription regulation 1 48886 49188
ANM47652.1 KX077896_p21 hypothetical protein phrog_709 unknown function unknown function -1 20985 21404
ANM47639.1 KX077896_p8 pleiotropic regulator of exopolysaccharide singleton unknown function unknown function 1 5176 5481
ANM47649.1 KX077896_p18 endopeptidase phrog_1330 tail protein tail -1 12676 17223
ANM47693.1 KX077896_p62 MutR family positive transcriptional regulator singleton unknown function unknown function -1 52991 53563
ANM47664.1 KX077896_p33 terminase small subunit phrog_83 terminase small subunit head and packaging -1 28900 29373
ANM47690.1 KX077896_p59 chloramphenicol acetyltransferase phrog_12857 unknown function unknown function 1 50288 50992
ANM47653.1 KX077896_p22 hypothetical protein phrog_88 major tail protein tail -1 21416 21985
ANM47638.1 KX077896_p7 site-specific recombinase singleton unknown function unknown function -1 4958 5182
ANM47682.1 KX077896_p51 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 43127 43675
ANM47697.1 KX077896_p66 epsilon antitoxin singleton unknown function unknown function -1 55922 56047
ANM47663.1 KX077896_p32 terminase large subunit phrog_9 terminase large subunit head and packaging -1 27311 28903
ANM47636.1 KX077896_p5 hypothetical protein singleton unknown function unknown function -1 4040 4663
ANM47696.1 KX077896_p65 GNAT family acetyltransferase phrog_21214 acetyltransferase other -1 55581 55946
ANM47666.1 KX077896_p35 hypothetical protein phrog_3782 unknown function unknown function -1 29656 29868
ANM47667.1 KX077896_p36 hypothetical protein phrog_6231 unknown function unknown function -1 29870 30151
ANM47674.1 KX077896_p43 hypothetical protein phrog_4709 unknown function unknown function -1 36169 36396
ANM47698.1 KX077896_p67 transcriptional regulator singleton unknown function unknown function -1 56064 56273
ANM47647.1 KX077896_p16 hypothetical protein phrog_1164 unknown function unknown function -1 12083 12451
ANM47654.1 KX077896_p23 hypothetical protein phrog_78 tail terminator connector -1 21987 22313
ANM47684.1 KX077896_p53 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 43910 45865