| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX130960 |
Definition |
Escherichia phage vB_EcoS-IME253, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Braunvirinae; Rtpvirus; Escherichia virus IME253. |
DB of origin |
NUCCORE |
Length |
46717 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
44.21 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| APU93265.1 | KX130960_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37106 | 37327 |
| APU93227.1 | KX130960_p27 | hypothetical protein | phrog_7411 | unknown function | unknown function | 1 | 10361 | 10540 |
| APU93267.1 | KX130960_p67 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 37526 | 38491 |
| APU93247.1 | KX130960_p47 | hypothetical protein | phrog_584 | major tail protein | tail | 1 | 21758 | 22414 |
| APU93244.1 | KX130960_p44 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 20550 | 20921 |
| APU93235.1 | KX130960_p35 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 12865 | 14430 |
| APU93234.1 | KX130960_p34 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 12339 | 12845 |
| APU93207.1 | KX130960_p7 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 1413 | 2549 |
| APU93217.1 | KX130960_p17 | hypothetical protein | phrog_4548 | unknown function | unknown function | -1 | 6891 | 7052 |
| APU93252.1 | KX130960_p52 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 26530 | 27000 |
| APU93259.1 | KX130960_p59 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 30704 | 34021 |
| APU93262.1 | KX130960_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35240 | 35425 |
| APU93248.1 | KX130960_p48 | hypothetical protein | phrog_22925 | unknown function | unknown function | 1 | 22525 | 22773 |
| APU93271.1 | KX130960_p71 | DNA primase/helicase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 42702 | 43625 |
| APU93263.1 | KX130960_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35615 | 35884 |
| APU93245.1 | KX130960_p45 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 20914 | 21351 |
| APU93218.1 | KX130960_p18 | hypothetical protein | phrog_4448 | unknown function | unknown function | -1 | 7052 | 7291 |
| APU93257.1 | KX130960_p57 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 29505 | 30077 |
| APU93256.1 | KX130960_p56 | tail assembly protein | phrog_30 | minor tail protein | tail | 1 | 28766 | 29524 |
| APU93274.1 | KX130960_p74 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 46255 | 46674 |
| APU93201.1 | KX130960_p1 | hypothetical protein | phrog_6031 | unknown function | unknown function | 1 | 34 | 234 |
| APU93236.1 | KX130960_p36 | hypothetical protein | phrog_14592 | virion structural protein | head and packaging | 1 | 14502 | 14858 |
| APU93212.1 | KX130960_p12 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 4021 | 4356 |
| APU93243.1 | KX130960_p43 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 20152 | 20553 |
| APU93246.1 | KX130960_p46 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 21341 | 21742 |
| APU93215.1 | KX130960_p15 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 6323 | 6676 |
| APU93226.1 | KX130960_p26 | hypothetical protein | phrog_5684 | unknown function | unknown function | 1 | 10152 | 10364 |
| APU93229.1 | KX130960_p29 | hypothetical protein | phrog_22596 | unknown function | unknown function | 1 | 10714 | 10866 |
| APU93210.1 | KX130960_p10 | lysin | phrog_7 | endolysin | lysis | 1 | 3157 | 3642 |
| APU93231.1 | KX130960_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11198 | 11338 |
| APU93270.1 | KX130960_p70 | tail fibers protein | phrog_16586 | tail fiber protein | tail | -1 | 39711 | 42614 |
| APU93250.1 | KX130960_p50 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 23136 | 23447 |
| APU93230.1 | KX130960_p30 | hypothetical protein | phrog_303 | unknown function | unknown function | 1 | 10924 | 11160 |
| APU93225.1 | KX130960_p25 | hypothetical protein | phrog_3955 | unknown function | unknown function | 1 | 9944 | 10081 |
| APU93221.1 | KX130960_p21 | hypothetical protein | phrog_7327 | unknown function | unknown function | 1 | 8721 | 9245 |
| APU93224.1 | KX130960_p24 | hypothetical protein | phrog_16063 | unknown function | unknown function | 1 | 9717 | 9947 |
| APU93222.1 | KX130960_p22 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 9318 | 9548 |
| APU93240.1 | KX130960_p40 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 17983 | 18462 |
| APU93272.1 | KX130960_p72 | hypothetical protein | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 43684 | 44157 |
| APU93208.1 | KX130960_p8 | hypothetical protein | phrog_4788 | unknown function | unknown function | 1 | 2634 | 2810 |
| APU93204.1 | KX130960_p4 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 711 | 836 |
| APU93216.1 | KX130960_p16 | hypothetical protein | phrog_5407 | unknown function | unknown function | -1 | 6673 | 6813 |
| APU93269.1 | KX130960_p69 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39259 | 39681 |
| APU93220.1 | KX130960_p20 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 8185 | 8721 |
| APU93205.1 | KX130960_p5 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 833 | 1075 |
| APU93261.1 | KX130960_p61 | hypothetical protein | phrog_4062 | unknown function | unknown function | 1 | 34431 | 35228 |
| APU93249.1 | KX130960_p49 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 22813 | 23127 |
| APU93254.1 | KX130960_p54 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 27392 | 28147 |
| APU93223.1 | KX130960_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9545 | 9715 |
| APU93209.1 | KX130960_p9 | holin | phrog_2877 | holin | lysis | 1 | 2887 | 3156 |
| APU93214.1 | KX130960_p14 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | -1 | 6099 | 6326 |
| APU93228.1 | KX130960_p28 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 10592 | 10717 |
| APU93206.1 | KX130960_p6 | hypothetical protein | phrog_4596 | unknown function | unknown function | 1 | 1079 | 1330 |
| APU93203.1 | KX130960_p3 | hypothetical protein | phrog_3249 | unknown function | unknown function | 1 | 452 | 640 |
| APU93242.1 | KX130960_p42 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 19865 | 20110 |
| APU93213.1 | KX130960_p13 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 4446 | 6029 |
| APU93239.1 | KX130960_p39 | capsid and scaffold protein | phrog_530 | head maturation protease | head and packaging | 1 | 16882 | 17970 |
| APU93211.1 | KX130960_p11 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | 1 | 3618 | 4007 |
| APU93258.1 | KX130960_p58 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30135 | 30623 |
| APU93255.1 | KX130960_p55 | Rha protein | phrog_518 | Rha-like transcriptional regulator | transcription regulation | -1 | 28172 | 28669 |
| APU93266.1 | KX130960_p66 | hypothetical protein | phrog_5247 | unknown function | unknown function | 1 | 37328 | 37522 |
| APU93232.1 | KX130960_p32 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 11727 | 11909 |
| APU93219.1 | KX130960_p19 | hypothetical protein | phrog_9053 | unknown function | unknown function | -1 | 7302 | 7478 |
| APU93251.1 | KX130960_p51 | tail length tape-measure protein 1 | phrog_24 | tail length tape measure protein | tail | 1 | 23483 | 26458 |
| APU93253.1 | KX130960_p53 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 27002 | 27352 |
| APU93268.1 | KX130960_p68 | recombinase | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 38565 | 39215 |
| APU93238.1 | KX130960_p38 | capsid and scaffold protein | phrog_324 | head morphogenesis | head and packaging | 1 | 16140 | 16868 |
| APU93264.1 | KX130960_p64 | KilA protein | phrog_8235 | anti-repressor | transcription regulation | -1 | 36027 | 36692 |
| APU93202.1 | KX130960_p2 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 234 | 455 |
| APU93260.1 | KX130960_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34063 | 34434 |
| APU93241.1 | KX130960_p41 | hypothetical protein | phrog_264 | major head protein | head and packaging | 1 | 18828 | 19772 |
| APU93233.1 | KX130960_p33 | hypothetical protein | phrog_3909 | unknown function | unknown function | 1 | 12057 | 12260 |
| APU93273.1 | KX130960_p73 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 44259 | 46253 |
| APU93237.1 | KX130960_p37 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 14915 | 16183 |