Genomic map of Escherichia phage vB_EcoS-IME253 (KX130960)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX130960
Definition
Escherichia phage vB_EcoS-IME253, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Braunvirinae; Rtpvirus; Escherichia virus IME253.
DB of origin
NUCCORE
Length
46717
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
44.21
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
APU93265.1 KX130960_p65 hypothetical protein singleton unknown function unknown function 1 37106 37327
APU93227.1 KX130960_p27 hypothetical protein phrog_7411 unknown function unknown function 1 10361 10540
APU93267.1 KX130960_p67 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 37526 38491
APU93247.1 KX130960_p47 hypothetical protein phrog_584 major tail protein tail 1 21758 22414
APU93244.1 KX130960_p44 hypothetical protein phrog_161 head closure Hc1 connector 1 20550 20921
APU93235.1 KX130960_p35 terminase large subunit phrog_38 terminase large subunit head and packaging 1 12865 14430
APU93234.1 KX130960_p34 terminase small subunit phrog_606 terminase small subunit head and packaging 1 12339 12845
APU93207.1 KX130960_p7 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 1413 2549
APU93217.1 KX130960_p17 hypothetical protein phrog_4548 unknown function unknown function -1 6891 7052
APU93252.1 KX130960_p52 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 26530 27000
APU93259.1 KX130960_p59 tail fiber protein phrog_31 central tail fiber J tail 1 30704 34021
APU93262.1 KX130960_p62 hypothetical protein singleton unknown function unknown function -1 35240 35425
APU93248.1 KX130960_p48 hypothetical protein phrog_22925 unknown function unknown function 1 22525 22773
APU93271.1 KX130960_p71 DNA primase/helicase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 42702 43625
APU93263.1 KX130960_p63 hypothetical protein singleton unknown function unknown function -1 35615 35884
APU93245.1 KX130960_p45 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 20914 21351
APU93218.1 KX130960_p18 hypothetical protein phrog_4448 unknown function unknown function -1 7052 7291
APU93257.1 KX130960_p57 tail assembly protein phrog_32 tail assembly protein tail 1 29505 30077
APU93256.1 KX130960_p56 tail assembly protein phrog_30 minor tail protein tail 1 28766 29524
APU93274.1 KX130960_p74 hypothetical protein phrog_824 unknown function unknown function 1 46255 46674
APU93201.1 KX130960_p1 hypothetical protein phrog_6031 unknown function unknown function 1 34 234
APU93236.1 KX130960_p36 hypothetical protein phrog_14592 virion structural protein head and packaging 1 14502 14858
APU93212.1 KX130960_p12 hypothetical protein phrog_2794 unknown function unknown function -1 4021 4356
APU93243.1 KX130960_p43 hypothetical protein phrog_302 virion structural protein head and packaging 1 20152 20553
APU93246.1 KX130960_p46 hypothetical protein phrog_179 tail terminator connector 1 21341 21742
APU93215.1 KX130960_p15 hypothetical protein phrog_2684 unknown function unknown function -1 6323 6676
APU93226.1 KX130960_p26 hypothetical protein phrog_5684 unknown function unknown function 1 10152 10364
APU93229.1 KX130960_p29 hypothetical protein phrog_22596 unknown function unknown function 1 10714 10866
APU93210.1 KX130960_p10 lysin phrog_7 endolysin lysis 1 3157 3642
APU93231.1 KX130960_p31 hypothetical protein singleton unknown function unknown function 1 11198 11338
APU93270.1 KX130960_p70 tail fibers protein phrog_16586 tail fiber protein tail -1 39711 42614
APU93250.1 KX130960_p50 hypothetical protein phrog_680 tail length tape measure protein tail 1 23136 23447
APU93230.1 KX130960_p30 hypothetical protein phrog_303 unknown function unknown function 1 10924 11160
APU93225.1 KX130960_p25 hypothetical protein phrog_3955 unknown function unknown function 1 9944 10081
APU93221.1 KX130960_p21 hypothetical protein phrog_7327 unknown function unknown function 1 8721 9245
APU93224.1 KX130960_p24 hypothetical protein phrog_16063 unknown function unknown function 1 9717 9947
APU93222.1 KX130960_p22 hypothetical protein phrog_2452 unknown function unknown function 1 9318 9548
APU93240.1 KX130960_p40 hypothetical protein phrog_1989 unknown function unknown function 1 17983 18462
APU93272.1 KX130960_p72 hypothetical protein phrog_2856 transcriptional regulator transcription regulation -1 43684 44157
APU93208.1 KX130960_p8 hypothetical protein phrog_4788 unknown function unknown function 1 2634 2810
APU93204.1 KX130960_p4 hypothetical protein phrog_2180 unknown function unknown function 1 711 836
APU93216.1 KX130960_p16 hypothetical protein phrog_5407 unknown function unknown function -1 6673 6813
APU93269.1 KX130960_p69 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 39259 39681
APU93220.1 KX130960_p20 hypothetical protein phrog_4841 unknown function unknown function 1 8185 8721
APU93205.1 KX130960_p5 hypothetical protein phrog_2817 unknown function unknown function 1 833 1075
APU93261.1 KX130960_p61 hypothetical protein phrog_4062 unknown function unknown function 1 34431 35228
APU93249.1 KX130960_p49 hypothetical protein phrog_569 tail length tape measure protein tail 1 22813 23127
APU93254.1 KX130960_p54 minor tail protein phrog_18 minor tail protein tail 1 27392 28147
APU93223.1 KX130960_p23 hypothetical protein singleton unknown function unknown function 1 9545 9715
APU93209.1 KX130960_p9 holin phrog_2877 holin lysis 1 2887 3156
APU93214.1 KX130960_p14 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism -1 6099 6326
APU93228.1 KX130960_p28 hypothetical protein phrog_1312 unknown function unknown function 1 10592 10717
APU93206.1 KX130960_p6 hypothetical protein phrog_4596 unknown function unknown function 1 1079 1330
APU93203.1 KX130960_p3 hypothetical protein phrog_3249 unknown function unknown function 1 452 640
APU93242.1 KX130960_p42 hypothetical protein phrog_2716 unknown function unknown function 1 19865 20110
APU93213.1 KX130960_p13 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 4446 6029
APU93239.1 KX130960_p39 capsid and scaffold protein phrog_530 head maturation protease head and packaging 1 16882 17970
APU93211.1 KX130960_p11 hypothetical protein phrog_1804 Rz-like spanin lysis 1 3618 4007
APU93258.1 KX130960_p58 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 30135 30623
APU93255.1 KX130960_p55 Rha protein phrog_518 Rha-like transcriptional regulator transcription regulation -1 28172 28669
APU93266.1 KX130960_p66 hypothetical protein phrog_5247 unknown function unknown function 1 37328 37522
APU93232.1 KX130960_p32 hypothetical protein phrog_2919 unknown function unknown function 1 11727 11909
APU93219.1 KX130960_p19 hypothetical protein phrog_9053 unknown function unknown function -1 7302 7478
APU93251.1 KX130960_p51 tail length tape-measure protein 1 phrog_24 tail length tape measure protein tail 1 23483 26458
APU93253.1 KX130960_p53 minor tail protein phrog_14 minor tail protein tail 1 27002 27352
APU93268.1 KX130960_p68 recombinase phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 38565 39215
APU93238.1 KX130960_p38 capsid and scaffold protein phrog_324 head morphogenesis head and packaging 1 16140 16868
APU93264.1 KX130960_p64 KilA protein phrog_8235 anti-repressor transcription regulation -1 36027 36692
APU93202.1 KX130960_p2 hypothetical protein phrog_2676 unknown function unknown function 1 234 455
APU93260.1 KX130960_p60 hypothetical protein singleton unknown function unknown function 1 34063 34434
APU93241.1 KX130960_p41 hypothetical protein phrog_264 major head protein head and packaging 1 18828 19772
APU93233.1 KX130960_p33 hypothetical protein phrog_3909 unknown function unknown function 1 12057 12260
APU93273.1 KX130960_p73 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 44259 46253
APU93237.1 KX130960_p37 portal protein phrog_146 portal protein head and packaging 1 14915 16183