| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX156762 |
Definition |
Staphylococcus phage vB_SauS_IMEP5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
44677 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
69 |
%GC |
34.26 |
Number of singletons |
12 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANM47010.1 | KX156762_p37 | holin | phrog_263 | holin | lysis | -1 | 17636 | 17944 |
| ANM47015.1 | KX156762_p42 | hypothetical protein | phrog_1766 | tail fiber protein | tail | -1 | 20849 | 21220 |
| ANM46996.1 | KX156762_p23 | hypothetical protein | phrog_2289 | helicase loader | DNA, RNA and nucleotide metabolism | -1 | 8863 | 9222 |
| ANM47000.1 | KX156762_p27 | hypothetical protein | phrog_3119 | unknown function | unknown function | -1 | 10822 | 11079 |
| ANM46993.1 | KX156762_p20 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 7048 | 7443 |
| ANM47034.1 | KX156762_p61 | capsid protein | phrog_10 | major head protein | head and packaging | -1 | 37849 | 39168 |
| ANM47003.1 | KX156762_p30 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 11599 | 12366 |
| ANM47035.1 | KX156762_p62 | head maturation protease | phrog_80 | head maturation protease | head and packaging | -1 | 39209 | 39763 |
| ANM46987.1 | KX156762_p14 | hypothetical protein | phrog_236 | nucleotide kinase | other | -1 | 4947 | 5198 |
| ANM47029.1 | KX156762_p56 | major tail protein | phrog_88 | major tail protein | tail | -1 | 35702 | 36298 |
| ANM47021.1 | KX156762_p48 | tail length tape-measure protein | phrog_167 | tail length tape measure protein | tail | -1 | 27385 | 32202 |
| ANM47028.1 | KX156762_p55 | major tail protein | phrog_1696 | major tail protein | tail | -1 | 35362 | 35613 |
| ANM46981.1 | KX156762_p8 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 3189 | 3611 |
| ANM47038.1 | KX156762_p65 | terminase | phrog_9 | terminase large subunit | head and packaging | -1 | 41196 | 42446 |
| ANM47037.1 | KX156762_p64 | hypothetical protein | phrog_502 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 41011 | 41184 |
| ANM47025.1 | KX156762_p52 | hypothetical protein | phrog_88 | major tail protein | tail | -1 | 34042 | 34638 |
| ANM47033.1 | KX156762_p60 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | -1 | 37438 | 37776 |
| ANM47020.1 | KX156762_p47 | tail fiber | phrog_33 | distal tail protein Dit | tail | -1 | 26554 | 27384 |
| ANM46983.1 | KX156762_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3868 | 4158 |
| ANM46991.1 | KX156762_p18 | holliday junction resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 5956 | 6354 |
| ANM46974.1 | KX156762_p1 | hypothetical protein | phrog_1058 | unknown function | unknown function | -1 | 1152 | 1553 |
| ANM47013.1 | KX156762_p40 | hypothetical protein | phrog_2968 | tail protein | tail | -1 | 20161 | 20574 |
| ANM46988.1 | KX156762_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5198 | 5599 |
| ANM47024.1 | KX156762_p51 | major tail protein | phrog_341 | major tail protein | tail | -1 | 33192 | 33953 |
| ANM47041.1 | KX156762_p68 | terminase | phrog_10517 | terminase large subunit | head and packaging | -1 | 43714 | 44112 |
| ANM46989.1 | KX156762_p16 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5599 | 5748 |
| ANM46994.1 | KX156762_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7448 | 7645 |
| ANM46985.1 | KX156762_p12 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4546 | 4722 |
| ANM47014.1 | KX156762_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20641 | 20862 |
| ANM47027.1 | KX156762_p54 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 35058 | 35336 |
| ANM47004.1 | KX156762_p31 | chromosome partitioning protein ParB | phrog_12047 | ParB-like partition nuclease | DNA, RNA and nucleotide metabolism | -1 | 12359 | 13273 |
| ANM47017.1 | KX156762_p44 | hypothetical protein | phrog_14029 | unknown function | unknown function | -1 | 22718 | 24427 |
| ANM47001.1 | KX156762_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11143 | 11322 |
| ANM47016.1 | KX156762_p43 | hypothetical protein | phrog_257 | minor tail protein | tail | -1 | 21220 | 22707 |
| ANM47006.1 | KX156762_p33 | repressor | phrog_8 | transcriptional regulator | transcription regulation | 1 | 13694 | 14032 |
| ANM47030.1 | KX156762_p57 | hypothetical protein | phrog_78 | tail terminator | connector | -1 | 36311 | 36715 |
| ANM47018.1 | KX156762_p45 | hypothetical protein | phrog_13912 | minor tail protein | tail | -1 | 24440 | 24970 |
| ANM46997.1 | KX156762_p24 | replication initiation protein | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 9222 | 9983 |
| ANM47039.1 | KX156762_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42457 | 42582 |
| ANM47005.1 | KX156762_p32 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | -1 | 13297 | 13515 |
| ANM47026.1 | KX156762_p53 | hypothetical protein | phrog_78 | tail terminator | connector | -1 | 34651 | 35055 |
| ANM46984.1 | KX156762_p11 | hypothetical protein | phrog_467 | unknown function | unknown function | -1 | 4159 | 4545 |
| ANM46995.1 | KX156762_p22 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 7638 | 8870 |
| ANM47022.1 | KX156762_p49 | hypothetical protein | phrog_28726 | unknown function | unknown function | -1 | 32226 | 32741 |
| ANM47002.1 | KX156762_p29 | hypothetical protein | phrog_5920 | unknown function | unknown function | -1 | 11335 | 11544 |
| ANM46975.1 | KX156762_p2 | hypothetical protein | phrog_386 | unknown function | unknown function | -1 | 1555 | 1776 |
| ANM46977.1 | KX156762_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1997 | 2308 |
| ANM47031.1 | KX156762_p58 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 36718 | 37122 |
| ANM47023.1 | KX156762_p50 | hypothetical protein | phrog_187 | head-tail adaptor | connector | -1 | 32757 | 33116 |
| ANM47032.1 | KX156762_p59 | hypothetical protein | phrog_25 | head closure Hc1 | connector | -1 | 37119 | 37448 |
| ANM46986.1 | KX156762_p13 | hypothetical protein | phrog_433 | unknown function | unknown function | -1 | 4722 | 4946 |
| ANM47008.1 | KX156762_p35 | integrase | phrog_1 | integrase | integration and excision | 1 | 14721 | 15770 |
| ANM47007.1 | KX156762_p34 | hypothetical protein | phrog_21937 | unknown function | unknown function | 1 | 14089 | 14673 |
| ANM47042.1 | KX156762_p69 | terminase | phrog_83 | terminase small subunit | head and packaging | -1 | 44105 | 44590 |
| ANM47011.1 | KX156762_p38 | tail fiber protein | phrog_1125 | tail fiber protein | tail | -1 | 17959 | 19770 |
| ANM46992.1 | KX156762_p19 | hypothetical protein | phrog_398 | unknown function | unknown function | -1 | 6368 | 7036 |
| ANM47040.1 | KX156762_p67 | hypothetical protein | phrog_7168 | homing endonuclease | DNA, RNA and nucleotide metabolism | -1 | 42776 | 43612 |
| ANM46982.1 | KX156762_p9 | hypothetical protein | phrog_5723 | acetyltransferase | other | -1 | 3604 | 3861 |
| ANM46999.1 | KX156762_p26 | hypothetical protein | phrog_946 | unknown function | unknown function | -1 | 10590 | 10829 |
| ANM46978.1 | KX156762_p5 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 2321 | 2551 |
| ANM46976.1 | KX156762_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1797 | 1994 |
| ANM46990.1 | KX156762_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5760 | 5945 |
| ANM47019.1 | KX156762_p46 | tail fiber | phrog_326 | tail protein with endopeptidase domain | other | -1 | 24963 | 26543 |
| ANM46980.1 | KX156762_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2794 | 3096 |
| ANM47012.1 | KX156762_p39 | hypothetical protein | phrog_2990 | unknown function | unknown function | -1 | 19782 | 20174 |
| ANM46998.1 | KX156762_p25 | hypothetical protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 9983 | 10597 |
| ANM47036.1 | KX156762_p63 | portal protein | phrog_12 | portal protein | head and packaging | -1 | 39756 | 41003 |
| ANM47009.1 | KX156762_p36 | lysin | phrog_489 | endolysin | lysis | -1 | 16216 | 17586 |
| ANM46979.1 | KX156762_p6 | hypothetical protein | phrog_28665 | unknown function | unknown function | -1 | 2627 | 2797 |