Genomic map of Staphylococcus phage vB_SauS_IMEP5 (KX156762)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX156762
Definition
Staphylococcus phage vB_SauS_IMEP5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
44677
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
34.26
Number of singletons
12
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANM47010.1 KX156762_p37 holin phrog_263 holin lysis -1 17636 17944
ANM47015.1 KX156762_p42 hypothetical protein phrog_1766 tail fiber protein tail -1 20849 21220
ANM46996.1 KX156762_p23 hypothetical protein phrog_2289 helicase loader DNA, RNA and nucleotide metabolism -1 8863 9222
ANM47000.1 KX156762_p27 hypothetical protein phrog_3119 unknown function unknown function -1 10822 11079
ANM46993.1 KX156762_p20 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 7048 7443
ANM47034.1 KX156762_p61 capsid protein phrog_10 major head protein head and packaging -1 37849 39168
ANM47003.1 KX156762_p30 hypothetical protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 11599 12366
ANM47035.1 KX156762_p62 head maturation protease phrog_80 head maturation protease head and packaging -1 39209 39763
ANM46987.1 KX156762_p14 hypothetical protein phrog_236 nucleotide kinase other -1 4947 5198
ANM47029.1 KX156762_p56 major tail protein phrog_88 major tail protein tail -1 35702 36298
ANM47021.1 KX156762_p48 tail length tape-measure protein phrog_167 tail length tape measure protein tail -1 27385 32202
ANM47028.1 KX156762_p55 major tail protein phrog_1696 major tail protein tail -1 35362 35613
ANM46981.1 KX156762_p8 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 3189 3611
ANM47038.1 KX156762_p65 terminase phrog_9 terminase large subunit head and packaging -1 41196 42446
ANM47037.1 KX156762_p64 hypothetical protein phrog_502 membrane protein moron, auxiliary metabolic gene and host takeover -1 41011 41184
ANM47025.1 KX156762_p52 hypothetical protein phrog_88 major tail protein tail -1 34042 34638
ANM47033.1 KX156762_p60 hypothetical protein phrog_40 head-tail adaptor Ad1 connector -1 37438 37776
ANM47020.1 KX156762_p47 tail fiber phrog_33 distal tail protein Dit tail -1 26554 27384
ANM46983.1 KX156762_p10 hypothetical protein singleton unknown function unknown function -1 3868 4158
ANM46991.1 KX156762_p18 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 5956 6354
ANM46974.1 KX156762_p1 hypothetical protein phrog_1058 unknown function unknown function -1 1152 1553
ANM47013.1 KX156762_p40 hypothetical protein phrog_2968 tail protein tail -1 20161 20574
ANM46988.1 KX156762_p15 hypothetical protein singleton unknown function unknown function -1 5198 5599
ANM47024.1 KX156762_p51 major tail protein phrog_341 major tail protein tail -1 33192 33953
ANM47041.1 KX156762_p68 terminase phrog_10517 terminase large subunit head and packaging -1 43714 44112
ANM46989.1 KX156762_p16 hypothetical protein singleton unknown function unknown function -1 5599 5748
ANM46994.1 KX156762_p21 hypothetical protein singleton unknown function unknown function -1 7448 7645
ANM46985.1 KX156762_p12 hypothetical protein singleton unknown function unknown function -1 4546 4722
ANM47014.1 KX156762_p41 hypothetical protein singleton unknown function unknown function -1 20641 20862
ANM47027.1 KX156762_p54 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 35058 35336
ANM47004.1 KX156762_p31 chromosome partitioning protein ParB phrog_12047 ParB-like partition nuclease DNA, RNA and nucleotide metabolism -1 12359 13273
ANM47017.1 KX156762_p44 hypothetical protein phrog_14029 unknown function unknown function -1 22718 24427
ANM47001.1 KX156762_p28 hypothetical protein singleton unknown function unknown function -1 11143 11322
ANM47016.1 KX156762_p43 hypothetical protein phrog_257 minor tail protein tail -1 21220 22707
ANM47006.1 KX156762_p33 repressor phrog_8 transcriptional regulator transcription regulation 1 13694 14032
ANM47030.1 KX156762_p57 hypothetical protein phrog_78 tail terminator connector -1 36311 36715
ANM47018.1 KX156762_p45 hypothetical protein phrog_13912 minor tail protein tail -1 24440 24970
ANM46997.1 KX156762_p24 replication initiation protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism -1 9222 9983
ANM47039.1 KX156762_p66 hypothetical protein singleton unknown function unknown function 1 42457 42582
ANM47005.1 KX156762_p32 transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 13297 13515
ANM47026.1 KX156762_p53 hypothetical protein phrog_78 tail terminator connector -1 34651 35055
ANM46984.1 KX156762_p11 hypothetical protein phrog_467 unknown function unknown function -1 4159 4545
ANM46995.1 KX156762_p22 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 7638 8870
ANM47022.1 KX156762_p49 hypothetical protein phrog_28726 unknown function unknown function -1 32226 32741
ANM47002.1 KX156762_p29 hypothetical protein phrog_5920 unknown function unknown function -1 11335 11544
ANM46975.1 KX156762_p2 hypothetical protein phrog_386 unknown function unknown function -1 1555 1776
ANM46977.1 KX156762_p4 hypothetical protein singleton unknown function unknown function -1 1997 2308
ANM47031.1 KX156762_p58 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 36718 37122
ANM47023.1 KX156762_p50 hypothetical protein phrog_187 head-tail adaptor connector -1 32757 33116
ANM47032.1 KX156762_p59 hypothetical protein phrog_25 head closure Hc1 connector -1 37119 37448
ANM46986.1 KX156762_p13 hypothetical protein phrog_433 unknown function unknown function -1 4722 4946
ANM47008.1 KX156762_p35 integrase phrog_1 integrase integration and excision 1 14721 15770
ANM47007.1 KX156762_p34 hypothetical protein phrog_21937 unknown function unknown function 1 14089 14673
ANM47042.1 KX156762_p69 terminase phrog_83 terminase small subunit head and packaging -1 44105 44590
ANM47011.1 KX156762_p38 tail fiber protein phrog_1125 tail fiber protein tail -1 17959 19770
ANM46992.1 KX156762_p19 hypothetical protein phrog_398 unknown function unknown function -1 6368 7036
ANM47040.1 KX156762_p67 hypothetical protein phrog_7168 homing endonuclease DNA, RNA and nucleotide metabolism -1 42776 43612
ANM46982.1 KX156762_p9 hypothetical protein phrog_5723 acetyltransferase other -1 3604 3861
ANM46999.1 KX156762_p26 hypothetical protein phrog_946 unknown function unknown function -1 10590 10829
ANM46978.1 KX156762_p5 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 2321 2551
ANM46976.1 KX156762_p3 hypothetical protein singleton unknown function unknown function -1 1797 1994
ANM46990.1 KX156762_p17 hypothetical protein singleton unknown function unknown function -1 5760 5945
ANM47019.1 KX156762_p46 tail fiber phrog_326 tail protein with endopeptidase domain other -1 24963 26543
ANM46980.1 KX156762_p7 hypothetical protein singleton unknown function unknown function -1 2794 3096
ANM47012.1 KX156762_p39 hypothetical protein phrog_2990 unknown function unknown function -1 19782 20174
ANM46998.1 KX156762_p25 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 9983 10597
ANM47036.1 KX156762_p63 portal protein phrog_12 portal protein head and packaging -1 39756 41003
ANM47009.1 KX156762_p36 lysin phrog_489 endolysin lysis -1 16216 17586
ANM46979.1 KX156762_p6 hypothetical protein phrog_28665 unknown function unknown function -1 2627 2797