Genomic map of Lactococcus phage 38502 (KX160204)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX160204
Definition
Lactococcus phage 38502, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
34067
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
35.39
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANT43277.1 KX160204_p7 hypothetical protein phrog_9675 unknown function unknown function 1 2857 3051
ANT43282.1 KX160204_p12 DNA replication protein phrog_1163 unknown function unknown function 1 5049 5792
ANT43291.1 KX160204_p21 hypothetical protein phrog_121 unknown function unknown function 1 9297 9905
ANT43330.1 KX160204_p60 hypothetical protein singleton unknown function unknown function 1 32998 33627
ANT43297.1 KX160204_p27 hypothetical protein phrog_2670 unknown function unknown function 1 12339 12539
ANT43319.1 KX160204_p49 hypothetical protein phrog_1633 unknown function unknown function 1 23074 23448
ANT43276.1 KX160204_p6 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 2055 2843
ANT43281.1 KX160204_p11 single strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 4340 4915
ANT43313.1 KX160204_p43 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 20900 21298
ANT43289.1 KX160204_p19 hypothetical protein phrog_4149 unknown function unknown function 1 8491 9060
ANT43307.1 KX160204_p37 portal protein phrog_104 portal protein head and packaging 1 15655 16923
ANT43315.1 KX160204_p45 hypothetical protein phrog_387 neck protein connector 1 21616 21852
ANT43271.1 KX160204_p1 Cl-like repressor phrog_35297 CI-like repressor transcription regulation -1 1 228
ANT43311.1 KX160204_p41 major head protein phrog_10 major head protein head and packaging 1 19688 20584
ANT43283.1 KX160204_p13 helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 5802 6692
ANT43318.1 KX160204_p48 hypothetical protein phrog_1526 unknown function unknown function 1 22799 23059
ANT43295.1 KX160204_p25 hypothetical protein phrog_1071 DNA methyltransferase other 1 11361 12053
ANT43317.1 KX160204_p47 major tail protein phrog_117 major tail protein tail 1 22115 22756
ANT43308.1 KX160204_p38 small terminase phrog_2494 minor head protein head and packaging 1 16923 17687
ANT43326.1 KX160204_p56 hypothetical protein phrog_689 holin lysis 1 31184 31408
ANT43292.1 KX160204_p22 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 9902 10321
ANT43298.1 KX160204_p28 hypothetical protein phrog_19098 unknown function unknown function 1 12548 12712
ANT43278.1 KX160204_p8 hypothetical protein phrog_5450 unknown function unknown function 1 3096 3332
ANT43323.1 KX160204_p53 tail protein phrog_202 distal tail protein Dit tail 1 26794 28350
ANT43272.1 KX160204_p2 Cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 421 645
ANT43299.1 KX160204_p29 hypothetical protein phrog_8817 unknown function unknown function 1 12672 12902
ANT43303.1 KX160204_p33 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 14017 14448
ANT43301.1 KX160204_p31 hypothetical protein singleton unknown function unknown function 1 13114 13329
ANT43309.1 KX160204_p39 large terminase phrog_9 terminase large subunit head and packaging 1 17738 19147
ANT43314.1 KX160204_p44 hypothetical protein phrog_501 head closure Hc1 connector 1 21276 21623
ANT43325.1 KX160204_p55 hypothetical protein phrog_8250 unknown function unknown function 1 30935 31171
ANT43279.1 KX160204_p9 hypothetical protein phrog_4729 unknown function unknown function 1 3431 3826
ANT43287.1 KX160204_p17 hypothetical protein phrog_5080 unknown function unknown function 1 7960 8166
ANT43273.1 KX160204_p3 antirepressor phrog_373 anti-repressor transcription regulation 1 642 1397
ANT43306.1 KX160204_p36 hypothetical protein phrog_2214 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15345 15701
ANT43274.1 KX160204_p4 hypothetical protein phrog_15116 unknown function unknown function 1 1411 1626
ANT43288.1 KX160204_p18 hypothetical protein phrog_4314 unknown function unknown function 1 8312 8497
ANT43286.1 KX160204_p16 hypothetical protein singleton unknown function unknown function 1 7667 7798
ANT43284.1 KX160204_p14 RusA resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6717 7244
ANT43321.1 KX160204_p51 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24272 24763
ANT43310.1 KX160204_p40 scaffold protein phrog_233 head scaffolding protein head and packaging 1 19169 19684
ANT43293.1 KX160204_p23 hypothetical protein phrog_4000 unknown function unknown function 1 10448 10909
ANT43316.1 KX160204_p46 hypothetical protein phrog_123 tail terminator connector 1 21853 22188
ANT43285.1 KX160204_p15 hypothetical protein phrog_3109 unknown function unknown function 1 7247 7435
ANT43328.1 KX160204_p58 lysin phrog_998 endolysin lysis 1 31709 32488
ANT43275.1 KX160204_p5 repressor phrog_3 transcriptional repressor transcription regulation 1 1801 2043
ANT43300.1 KX160204_p30 hypothetical protein phrog_22905 unknown function unknown function 1 12899 13117
ANT43294.1 KX160204_p24 hypothetical protein phrog_17991 unknown function unknown function 1 10906 11334
ANT43290.1 KX160204_p20 hypothetical protein phrog_8486 unknown function unknown function 1 9070 9342
ANT43322.1 KX160204_p52 tapemeasure protein phrog_58 tail length tape measure protein tail 1 24828 26810
ANT43305.1 KX160204_p35 hypothetical protein singleton unknown function unknown function 1 14961 15317
ANT43320.1 KX160204_p50 tapemeasure protein phrog_6900 tail length tape measure protein tail 1 23448 23984
ANT43280.1 KX160204_p10 single strand annealing protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 3835 4326
ANT43327.1 KX160204_p57 holin phrog_263 holin lysis 1 31422 31709
ANT43304.1 KX160204_p34 HNH endonuclease phrog_17283 HNH endonuclease DNA, RNA and nucleotide metabolism 1 14691 14906
ANT43296.1 KX160204_p26 hypothetical protein phrog_4501 unknown function unknown function 1 12100 12342
ANT43324.1 KX160204_p54 baseplate/receptor binding protein phrog_6468 tail fiber protein; host specificity tail 1 28329 30923
ANT43312.1 KX160204_p42 hypothetical protein phrog_1539 Arc-like repressor transcription regulation 1 20599 20898
ANT43329.1 KX160204_p59 hypothetical protein phrog_5881 unknown function unknown function 1 32588 32992
ANT43302.1 KX160204_p32 transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 13396 13932