| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160204 |
Definition |
Lactococcus phage 38502, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
34067 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
35.39 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT43277.1 | KX160204_p7 | hypothetical protein | phrog_9675 | unknown function | unknown function | 1 | 2857 | 3051 |
| ANT43282.1 | KX160204_p12 | DNA replication protein | phrog_1163 | unknown function | unknown function | 1 | 5049 | 5792 |
| ANT43291.1 | KX160204_p21 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9297 | 9905 |
| ANT43330.1 | KX160204_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32998 | 33627 |
| ANT43297.1 | KX160204_p27 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 12339 | 12539 |
| ANT43319.1 | KX160204_p49 | hypothetical protein | phrog_1633 | unknown function | unknown function | 1 | 23074 | 23448 |
| ANT43276.1 | KX160204_p6 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 2055 | 2843 |
| ANT43281.1 | KX160204_p11 | single strand DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4340 | 4915 |
| ANT43313.1 | KX160204_p43 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 20900 | 21298 |
| ANT43289.1 | KX160204_p19 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 8491 | 9060 |
| ANT43307.1 | KX160204_p37 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 15655 | 16923 |
| ANT43315.1 | KX160204_p45 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 21616 | 21852 |
| ANT43271.1 | KX160204_p1 | Cl-like repressor | phrog_35297 | CI-like repressor | transcription regulation | -1 | 1 | 228 |
| ANT43311.1 | KX160204_p41 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 19688 | 20584 |
| ANT43283.1 | KX160204_p13 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5802 | 6692 |
| ANT43318.1 | KX160204_p48 | hypothetical protein | phrog_1526 | unknown function | unknown function | 1 | 22799 | 23059 |
| ANT43295.1 | KX160204_p25 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 11361 | 12053 |
| ANT43317.1 | KX160204_p47 | major tail protein | phrog_117 | major tail protein | tail | 1 | 22115 | 22756 |
| ANT43308.1 | KX160204_p38 | small terminase | phrog_2494 | minor head protein | head and packaging | 1 | 16923 | 17687 |
| ANT43326.1 | KX160204_p56 | hypothetical protein | phrog_689 | holin | lysis | 1 | 31184 | 31408 |
| ANT43292.1 | KX160204_p22 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 9902 | 10321 |
| ANT43298.1 | KX160204_p28 | hypothetical protein | phrog_19098 | unknown function | unknown function | 1 | 12548 | 12712 |
| ANT43278.1 | KX160204_p8 | hypothetical protein | phrog_5450 | unknown function | unknown function | 1 | 3096 | 3332 |
| ANT43323.1 | KX160204_p53 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 26794 | 28350 |
| ANT43272.1 | KX160204_p2 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 421 | 645 |
| ANT43299.1 | KX160204_p29 | hypothetical protein | phrog_8817 | unknown function | unknown function | 1 | 12672 | 12902 |
| ANT43303.1 | KX160204_p33 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 14017 | 14448 |
| ANT43301.1 | KX160204_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13114 | 13329 |
| ANT43309.1 | KX160204_p39 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 17738 | 19147 |
| ANT43314.1 | KX160204_p44 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 21276 | 21623 |
| ANT43325.1 | KX160204_p55 | hypothetical protein | phrog_8250 | unknown function | unknown function | 1 | 30935 | 31171 |
| ANT43279.1 | KX160204_p9 | hypothetical protein | phrog_4729 | unknown function | unknown function | 1 | 3431 | 3826 |
| ANT43287.1 | KX160204_p17 | hypothetical protein | phrog_5080 | unknown function | unknown function | 1 | 7960 | 8166 |
| ANT43273.1 | KX160204_p3 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 642 | 1397 |
| ANT43306.1 | KX160204_p36 | hypothetical protein | phrog_2214 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15345 | 15701 |
| ANT43274.1 | KX160204_p4 | hypothetical protein | phrog_15116 | unknown function | unknown function | 1 | 1411 | 1626 |
| ANT43288.1 | KX160204_p18 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 8312 | 8497 |
| ANT43286.1 | KX160204_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7667 | 7798 |
| ANT43284.1 | KX160204_p14 | RusA resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6717 | 7244 |
| ANT43321.1 | KX160204_p51 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 24272 | 24763 |
| ANT43310.1 | KX160204_p40 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 19169 | 19684 |
| ANT43293.1 | KX160204_p23 | hypothetical protein | phrog_4000 | unknown function | unknown function | 1 | 10448 | 10909 |
| ANT43316.1 | KX160204_p46 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 21853 | 22188 |
| ANT43285.1 | KX160204_p15 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 7247 | 7435 |
| ANT43328.1 | KX160204_p58 | lysin | phrog_998 | endolysin | lysis | 1 | 31709 | 32488 |
| ANT43275.1 | KX160204_p5 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 1801 | 2043 |
| ANT43300.1 | KX160204_p30 | hypothetical protein | phrog_22905 | unknown function | unknown function | 1 | 12899 | 13117 |
| ANT43294.1 | KX160204_p24 | hypothetical protein | phrog_17991 | unknown function | unknown function | 1 | 10906 | 11334 |
| ANT43290.1 | KX160204_p20 | hypothetical protein | phrog_8486 | unknown function | unknown function | 1 | 9070 | 9342 |
| ANT43322.1 | KX160204_p52 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 24828 | 26810 |
| ANT43305.1 | KX160204_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14961 | 15317 |
| ANT43320.1 | KX160204_p50 | tapemeasure protein | phrog_6900 | tail length tape measure protein | tail | 1 | 23448 | 23984 |
| ANT43280.1 | KX160204_p10 | single strand annealing protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 3835 | 4326 |
| ANT43327.1 | KX160204_p57 | holin | phrog_263 | holin | lysis | 1 | 31422 | 31709 |
| ANT43304.1 | KX160204_p34 | HNH endonuclease | phrog_17283 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14691 | 14906 |
| ANT43296.1 | KX160204_p26 | hypothetical protein | phrog_4501 | unknown function | unknown function | 1 | 12100 | 12342 |
| ANT43324.1 | KX160204_p54 | baseplate/receptor binding protein | phrog_6468 | tail fiber protein; host specificity | tail | 1 | 28329 | 30923 |
| ANT43312.1 | KX160204_p42 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 20599 | 20898 |
| ANT43329.1 | KX160204_p59 | hypothetical protein | phrog_5881 | unknown function | unknown function | 1 | 32588 | 32992 |
| ANT43302.1 | KX160204_p32 | transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | 1 | 13396 | 13932 |