| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160206 |
Definition |
Lactococcus phage 50902, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
30745 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
36.04 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT43404.1 | KX160206_p14 | hypothetical protein | phrog_5080 | unknown function | unknown function | 1 | 7038 | 7244 |
| ANT43419.1 | KX160206_p29 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 14730 | 16163 |
| ANT43421.1 | KX160206_p31 | hypothetical protein | phrog_22744 | unknown function | unknown function | 1 | 17917 | 18135 |
| ANT43422.1 | KX160206_p32 | scaffold protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 18275 | 18922 |
| ANT43429.1 | KX160206_p39 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 22785 | 23132 |
| ANT43394.1 | KX160206_p4 | hypothetical protein | phrog_9675 | unknown function | unknown function | 1 | 1706 | 1900 |
| ANT43433.1 | KX160206_p43 | tail-associated lysin | phrog_538 | minor tail protein | tail | 1 | 26539 | 27654 |
| ANT43401.1 | KX160206_p11 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5243 | 6133 |
| ANT43405.1 | KX160206_p15 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 7487 | 7675 |
| ANT43400.1 | KX160206_p10 | DNA replication protein | phrog_1163 | unknown function | unknown function | 1 | 4460 | 5233 |
| ANT43410.1 | KX160206_p20 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9561 | 10091 |
| ANT43420.1 | KX160206_p30 | minor head protein | phrog_19443 | minor head protein | head and packaging | 1 | 16168 | 17913 |
| ANT43430.1 | KX160206_p40 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 23231 | 23461 |
| ANT43425.1 | KX160206_p35 | structural protein | phrog_1236 | head protein | head and packaging | 1 | 20230 | 20796 |
| ANT43391.1 | KX160206_p1 | Cl-like repressor | phrog_35297 | CI-like repressor | transcription regulation | -1 | 1 | 228 |
| ANT43395.1 | KX160206_p5 | antirepressor-like protein | singleton | unknown function | unknown function | 1 | 2185 | 2529 |
| ANT43411.1 | KX160206_p21 | hypothetical protein | phrog_4000 | unknown function | unknown function | 1 | 10069 | 10830 |
| ANT43427.1 | KX160206_p37 | structural tail terminator | phrog_957 | head protein | head and packaging | 1 | 21541 | 21912 |
| ANT43435.1 | KX160206_p45 | hypothetical protein | phrog_6453 | unknown function | unknown function | 1 | 28693 | 28995 |
| ANT43413.1 | KX160206_p23 | hypothetical protein | phrog_4501 | unknown function | unknown function | 1 | 11537 | 11791 |
| ANT43434.1 | KX160206_p44 | baseplate/receptor binding protein | phrog_1220 | head protein | head and packaging | 1 | 27651 | 28679 |
| ANT43417.1 | KX160206_p27 | terminase small subunit | phrog_2538 | terminase small subunit | head and packaging | 1 | 13101 | 13511 |
| ANT43418.1 | KX160206_p28 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 13501 | 14742 |
| ANT43426.1 | KX160206_p36 | activator of tail terminator | phrog_5 | tail completion or Neck1 protein | connector | 1 | 21122 | 21541 |
| ANT43393.1 | KX160206_p3 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 895 | 1692 |
| ANT43397.1 | KX160206_p7 | hypothetical protein | phrog_4729 | unknown function | unknown function | 1 | 2794 | 3189 |
| ANT43437.1 | KX160206_p47 | endolysin | phrog_291 | endolysin | lysis | 1 | 29206 | 30495 |
| ANT43432.1 | KX160206_p42 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 25665 | 26537 |
| ANT43392.1 | KX160206_p2 | antirepressor | phrog_2977 | anti-repressor | transcription regulation | 1 | 467 | 883 |
| ANT43408.1 | KX160206_p18 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 8518 | 9126 |
| ANT43415.1 | KX160206_p25 | hypothetical protein | phrog_21465 | unknown function | unknown function | 1 | 12156 | 12461 |
| ANT43412.1 | KX160206_p22 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 10857 | 11549 |
| ANT43406.1 | KX160206_p16 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 7665 | 8237 |
| ANT43398.1 | KX160206_p8 | single strand annealing protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 3198 | 3713 |
| ANT43414.1 | KX160206_p24 | hypothetical protein | phrog_31993 | unknown function | unknown function | 1 | 11788 | 12201 |
| ANT43409.1 | KX160206_p19 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 9123 | 9542 |
| ANT43402.1 | KX160206_p12 | RusA resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6158 | 6685 |
| ANT43399.1 | KX160206_p9 | single strand DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3727 | 4326 |
| ANT43416.1 | KX160206_p26 | transcriptional activator | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 12524 | 12949 |
| ANT43428.1 | KX160206_p38 | major tail protein | phrog_885 | major tail protein | tail | 1 | 21912 | 22760 |
| ANT43431.1 | KX160206_p41 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 23461 | 25662 |
| ANT43436.1 | KX160206_p46 | holin | phrog_881 | holin | lysis | 1 | 28985 | 29209 |
| ANT43396.1 | KX160206_p6 | hypothetical protein | phrog_5450 | unknown function | unknown function | 1 | 2459 | 2695 |
| ANT43424.1 | KX160206_p34 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 19198 | 20094 |
| ANT43407.1 | KX160206_p17 | hypothetical protein | phrog_8486 | unknown function | unknown function | 1 | 8291 | 8563 |
| ANT43423.1 | KX160206_p33 | hypothetical protein | phrog_13508 | unknown function | unknown function | 1 | 18934 | 19182 |
| ANT43403.1 | KX160206_p13 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 6688 | 6927 |