| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160208 |
Definition |
Lactococcus phage 53802, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
36445 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
35.96 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT43522.1 | KX160208_p32 | hypothetical protein | phrog_28915 | unknown function | unknown function | 1 | 13996 | 14217 |
| ANT43528.1 | KX160208_p38 | hypothetical protein | phrog_20139 | unknown function | unknown function | 1 | 19333 | 19581 |
| ANT43523.1 | KX160208_p33 | transcriptional activator | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 14297 | 14719 |
| ANT43495.1 | KX160208_p5 | hypothetical protein | phrog_15116 | unknown function | unknown function | 1 | 1540 | 1755 |
| ANT43536.1 | KX160208_p46 | major tail protein | phrog_238 | major tail protein | tail | 1 | 22811 | 23308 |
| ANT43506.1 | KX160208_p16 | hypothetical protein | phrog_2108 | unknown function | unknown function | 1 | 7600 | 7764 |
| ANT43509.1 | KX160208_p19 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 8522 | 8701 |
| ANT43547.1 | KX160208_p57 | holin | phrog_881 | holin | lysis | 1 | 34579 | 34803 |
| ANT43531.1 | KX160208_p41 | intimate attachment protein | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 21246 | 21437 |
| ANT43503.1 | KX160208_p13 | DNA recombination protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4778 | 5704 |
| ANT43543.1 | KX160208_p53 | baseplate protein | phrog_34618 | baseplate protein | tail | 1 | 32594 | 32917 |
| ANT43548.1 | KX160208_p58 | endolysin | phrog_291 | endolysin | lysis | 1 | 34800 | 36089 |
| ANT43541.1 | KX160208_p51 | tail associated lysin | phrog_1067 | minor head protein | head and packaging | 1 | 27194 | 30079 |
| ANT43537.1 | KX160208_p47 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 23424 | 23774 |
| ANT43539.1 | KX160208_p49 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 24143 | 26419 |
| ANT43513.1 | KX160208_p23 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9855 | 10397 |
| ANT43504.1 | KX160208_p14 | replisome organizer protein | phrog_5968 | replisome organizer | DNA, RNA and nucleotide metabolism | 1 | 5933 | 6709 |
| ANT43507.1 | KX160208_p17 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 7754 | 8173 |
| ANT43525.1 | KX160208_p35 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15700 | 16920 |
| ANT43508.1 | KX160208_p18 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 8174 | 8413 |
| ANT43502.1 | KX160208_p12 | hypothetical protein | phrog_20123 | unknown function | unknown function | 1 | 3948 | 4781 |
| ANT43519.1 | KX160208_p29 | hypothetical protein | phrog_3808 | unknown function | unknown function | 1 | 12592 | 12972 |
| ANT43491.1 | KX160208_p1 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 1 | 240 |
| ANT43510.1 | KX160208_p20 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 8691 | 9251 |
| ANT43516.1 | KX160208_p26 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10993 | 11523 |
| ANT43520.1 | KX160208_p30 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 12959 | 13651 |
| ANT43492.1 | KX160208_p2 | hypothetical protein | phrog_16628 | unknown function | unknown function | 1 | 253 | 468 |
| ANT43535.1 | KX160208_p45 | structural protein | phrog_176 | tail terminator | connector | 1 | 22411 | 22800 |
| ANT43538.1 | KX160208_p48 | hypothetical protein | phrog_441 | tail assembly chaperone | tail | 1 | 23816 | 24127 |
| ANT43512.1 | KX160208_p22 | hypothetical protein | phrog_7240 | unknown function | unknown function | 1 | 9656 | 9862 |
| ANT43544.1 | KX160208_p54 | baseplate protein | phrog_5983 | tail protein | tail | 1 | 32886 | 33770 |
| ANT43494.1 | KX160208_p4 | antirepressor | phrog_8448 | anti-repressor | transcription regulation | 1 | 1224 | 1526 |
| ANT43530.1 | KX160208_p40 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 20317 | 21180 |
| ANT43498.1 | KX160208_p8 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 2427 | 3206 |
| ANT43521.1 | KX160208_p31 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 13820 | 13987 |
| ANT43534.1 | KX160208_p44 | tail component | phrog_5 | tail completion or Neck1 protein | connector | 1 | 22088 | 22414 |
| ANT43517.1 | KX160208_p27 | hypothetical protein | phrog_4000 | unknown function | unknown function | 1 | 11528 | 12262 |
| ANT43526.1 | KX160208_p36 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 16921 | 18282 |
| ANT43542.1 | KX160208_p52 | baseplate protein | phrog_31122 | baseplate protein | tail | 1 | 30092 | 32590 |
| ANT43497.1 | KX160208_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2184 | 2411 |
| ANT43515.1 | KX160208_p25 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 10555 | 10974 |
| ANT43514.1 | KX160208_p24 | hypothetical protein | phrog_17274 | unknown function | unknown function | 1 | 10394 | 10558 |
| ANT43518.1 | KX160208_p28 | hypothetical protein | phrog_9662 | unknown function | unknown function | 1 | 12255 | 12599 |
| ANT43499.1 | KX160208_p9 | hypothetical protein | phrog_9675 | unknown function | unknown function | 1 | 3220 | 3414 |
| ANT43545.1 | KX160208_p55 | receptor binding protein | singleton | unknown function | unknown function | 1 | 33789 | 34274 |
| ANT43546.1 | KX160208_p56 | hypothetical protein | phrog_6453 | unknown function | unknown function | 1 | 34287 | 34577 |
| ANT43501.1 | KX160208_p11 | transcriptional regulator | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 3669 | 3845 |
| ANT43500.1 | KX160208_p10 | hypothetical protein | phrog_5257 | unknown function | unknown function | 1 | 3424 | 3672 |
| ANT43493.1 | KX160208_p3 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 478 | 1203 |
| ANT43524.1 | KX160208_p34 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 15198 | 15710 |
| ANT43529.1 | KX160208_p39 | scaffolding protein | phrog_2932 | head scaffolding protein | head and packaging | 1 | 19702 | 20298 |
| ANT43496.1 | KX160208_p6 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 1930 | 2172 |
| ANT43511.1 | KX160208_p21 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 9270 | 9659 |
| ANT43540.1 | KX160208_p50 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 26433 | 27194 |
| ANT43505.1 | KX160208_p15 | DnaC protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6719 | 7603 |
| ANT43532.1 | KX160208_p42 | head-tail connector domain protein | phrog_132 | head-tail adaptor | connector | 1 | 21451 | 21783 |
| ANT43533.1 | KX160208_p43 | hypothetical protein | phrog_348 | minor head protein | head and packaging | 1 | 21780 | 22091 |
| ANT43527.1 | KX160208_p37 | minor capsid protein | phrog_115 | minor head protein | head and packaging | 1 | 18286 | 19326 |