| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160209 |
Definition |
Lactococcus phage 58502, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
30238 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
36.2 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT43589.1 | KX160209_p41 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 22692 | 22922 |
| ANT43594.1 | KX160209_p46 | hypothetical protein | phrog_6453 | unknown function | unknown function | 1 | 28155 | 28457 |
| ANT43571.1 | KX160209_p23 | hypothetical protein | phrog_4501 | unknown function | unknown function | 1 | 11284 | 11529 |
| ANT43562.1 | KX160209_p14 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 7156 | 7395 |
| ANT43549.1 | KX160209_p1 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 390 | 614 |
| ANT43581.1 | KX160209_p33 | hypothetical protein | phrog_13508 | unknown function | unknown function | 1 | 18400 | 18642 |
| ANT43596.1 | KX160209_p48 | endolysin | phrog_291 | endolysin | lysis | 1 | 28668 | 29957 |
| ANT43554.1 | KX160209_p6 | hypothetical protein | phrog_9675 | unknown function | unknown function | 1 | 2808 | 3002 |
| ANT43587.1 | KX160209_p39 | major tail protein | phrog_885 | major tail protein | tail | 1 | 21373 | 22221 |
| ANT43556.1 | KX160209_p8 | hypothetical protein | phrog_4729 | unknown function | unknown function | 1 | 3382 | 3777 |
| ANT43591.1 | KX160209_p43 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 25126 | 25998 |
| ANT43588.1 | KX160209_p40 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 22246 | 22593 |
| ANT43583.1 | KX160209_p35 | structural protein | phrog_1236 | head protein | head and packaging | 1 | 19690 | 20256 |
| ANT43567.1 | KX160209_p19 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 9131 | 9550 |
| ANT43573.1 | KX160209_p25 | hypothetical protein | phrog_21465 | unknown function | unknown function | 1 | 11818 | 12030 |
| ANT43553.1 | KX160209_p5 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 2015 | 2794 |
| ANT43582.1 | KX160209_p34 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 18658 | 19554 |
| ANT43586.1 | KX160209_p38 | structural tail terminator | phrog_957 | head protein | head and packaging | 1 | 21002 | 21373 |
| ANT43558.1 | KX160209_p10 | single strand DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4315 | 4794 |
| ANT43559.1 | KX160209_p11 | replisome organizer protein | phrog_1163 | unknown function | unknown function | 1 | 4928 | 5701 |
| ANT43565.1 | KX160209_p17 | hypothetical protein | phrog_8486 | unknown function | unknown function | 1 | 8299 | 8571 |
| ANT43568.1 | KX160209_p20 | hypothetical protein | phrog_21466 | unknown function | unknown function | 1 | 9677 | 9829 |
| ANT43560.1 | KX160209_p12 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5711 | 6601 |
| ANT43575.1 | KX160209_p27 | small terminase | phrog_2538 | terminase small subunit | head and packaging | 1 | 12670 | 13080 |
| ANT43561.1 | KX160209_p13 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6626 | 7153 |
| ANT43580.1 | KX160209_p32 | scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 17741 | 18388 |
| ANT43557.1 | KX160209_p9 | single strand annealing protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 3786 | 4301 |
| ANT43593.1 | KX160209_p45 | baseplate/receptor binding protein | phrog_1220 | head protein | head and packaging | 1 | 27112 | 28140 |
| ANT43578.1 | KX160209_p30 | minor capsid protein | phrog_115 | minor head protein | head and packaging | 1 | 15737 | 17404 |
| ANT43563.1 | KX160209_p15 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 7498 | 7686 |
| ANT43574.1 | KX160209_p26 | transcriptional activator | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 12093 | 12518 |
| ANT43592.1 | KX160209_p44 | tail-associated lysin | phrog_538 | minor tail protein | tail | 1 | 26000 | 27115 |
| ANT43564.1 | KX160209_p16 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 7676 | 8245 |
| ANT43570.1 | KX160209_p22 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 10595 | 11287 |
| ANT43555.1 | KX160209_p7 | hypothetical protein | phrog_5450 | unknown function | unknown function | 1 | 3047 | 3283 |
| ANT43577.1 | KX160209_p29 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 14299 | 15732 |
| ANT43572.1 | KX160209_p24 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 11526 | 11726 |
| ANT43595.1 | KX160209_p47 | holin | phrog_881 | holin | lysis | 1 | 28447 | 28671 |
| ANT43585.1 | KX160209_p37 | activator of tail terminator | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20583 | 21002 |
| ANT43584.1 | KX160209_p36 | head-tail connector | phrog_1059 | head-tail adaptor | connector | 1 | 20258 | 20578 |
| ANT43569.1 | KX160209_p21 | hypothetical protein | phrog_4000 | unknown function | unknown function | 1 | 9807 | 10568 |
| ANT43552.1 | KX160209_p4 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 1761 | 2003 |
| ANT43551.1 | KX160209_p3 | hypothetical protein | phrog_15116 | unknown function | unknown function | 1 | 1371 | 1586 |
| ANT43579.1 | KX160209_p31 | hypothetical protein | phrog_21609 | unknown function | unknown function | 1 | 17419 | 17640 |
| ANT43590.1 | KX160209_p42 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 22922 | 25123 |
| ANT43576.1 | KX160209_p28 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 13070 | 14311 |
| ANT43566.1 | KX160209_p18 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 8526 | 9134 |
| ANT43550.1 | KX160209_p2 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 611 | 1357 |
| ANT43597.1 | KX160209_p49 | hypothetical protein | phrog_11039 | unknown function | unknown function | 1 | 30033 | 30233 |