| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160210 |
Definition |
Lactococcus phage 62502, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
30616 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
36.08 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT43610.1 | KX160210_p13 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6659 | 7186 |
| ANT43634.1 | KX160210_p37 | major head protein | phrog_840 | major head protein | head and packaging | 1 | 19035 | 19931 |
| ANT43642.1 | KX160210_p45 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 23299 | 25500 |
| ANT43611.1 | KX160210_p14 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 7189 | 7428 |
| ANT43609.1 | KX160210_p12 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5744 | 6634 |
| ANT43604.1 | KX160210_p7 | hypothetical protein | phrog_5450 | unknown function | unknown function | 1 | 3047 | 3283 |
| ANT43632.1 | KX160210_p35 | scaffolding protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 18118 | 18765 |
| ANT43613.1 | KX160210_p16 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 7891 | 8076 |
| ANT43647.1 | KX160210_p50 | holin | phrog_881 | holin | lysis | 1 | 28825 | 29049 |
| ANT43641.1 | KX160210_p44 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 23069 | 23299 |
| ANT43638.1 | KX160210_p41 | tail terminator | phrog_957 | head protein | head and packaging | 1 | 21379 | 21750 |
| ANT43614.1 | KX160210_p17 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 8070 | 8660 |
| ANT43605.1 | KX160210_p8 | hypothetical protein | phrog_4729 | unknown function | unknown function | 1 | 3382 | 3777 |
| ANT43631.1 | KX160210_p34 | hypothetical protein | phrog_35720 | unknown function | unknown function | 1 | 17887 | 18021 |
| ANT43639.1 | KX160210_p42 | major tail protein | phrog_885 | major tail protein | tail | 1 | 21750 | 22598 |
| ANT43637.1 | KX160210_p40 | activator of tail terminator | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20960 | 21379 |
| ANT43602.1 | KX160210_p5 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 2015 | 2794 |
| ANT43612.1 | KX160210_p15 | hypothetical protein | phrog_5080 | unknown function | unknown function | 1 | 7539 | 7745 |
| ANT43648.1 | KX160210_p51 | endolysin | phrog_291 | endolysin | lysis | 1 | 29046 | 30335 |
| ANT43622.1 | KX160210_p25 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 11549 | 12241 |
| ANT43619.1 | KX160210_p22 | hypothetical protein | phrog_21466 | unknown function | unknown function | 1 | 10506 | 10658 |
| ANT43649.1 | KX160210_p52 | hypothetical protein | phrog_11039 | unknown function | unknown function | 1 | 30411 | 30611 |
| ANT43630.1 | KX160210_p33 | minor head protein | phrog_115 | minor head protein | head and packaging | 1 | 16860 | 17909 |
| ANT43608.1 | KX160210_p11 | DNA replication protein | phrog_1163 | unknown function | unknown function | 1 | 5000 | 5734 |
| ANT43621.1 | KX160210_p24 | hypothetical protein | phrog_17991 | unknown function | unknown function | 1 | 11094 | 11522 |
| ANT43626.1 | KX160210_p29 | transcriptional activator | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 13216 | 13641 |
| ANT43643.1 | KX160210_p46 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 25503 | 26375 |
| ANT43623.1 | KX160210_p26 | hypothetical protein | phrog_4501 | unknown function | unknown function | 1 | 12229 | 12483 |
| ANT43599.1 | KX160210_p2 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 611 | 1357 |
| ANT43640.1 | KX160210_p43 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 22623 | 22970 |
| ANT43615.1 | KX160210_p18 | hypothetical protein | phrog_8486 | unknown function | unknown function | 1 | 8670 | 8942 |
| ANT43624.1 | KX160210_p27 | hypothetical protein | phrog_31993 | unknown function | unknown function | 1 | 12480 | 12893 |
| ANT43636.1 | KX160210_p39 | head-tail adapter protein | phrog_1059 | head-tail adaptor | connector | 1 | 20635 | 20955 |
| ANT43627.1 | KX160210_p30 | terminase small subunit | phrog_2538 | terminase small subunit | head and packaging | 1 | 13793 | 14203 |
| ANT43645.1 | KX160210_p48 | baseplate/receptor binding protein | phrog_1220 | head protein | head and packaging | 1 | 27489 | 28517 |
| ANT43617.1 | KX160210_p20 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9469 | 10071 |
| ANT43600.1 | KX160210_p3 | hypothetical protein | phrog_15116 | unknown function | unknown function | 1 | 1371 | 1586 |
| ANT43633.1 | KX160210_p36 | hypothetical protein | phrog_13508 | unknown function | unknown function | 1 | 18777 | 19019 |
| ANT43616.1 | KX160210_p19 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 8897 | 9499 |
| ANT43601.1 | KX160210_p4 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 1761 | 2003 |
| ANT43629.1 | KX160210_p32 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 15422 | 16855 |
| ANT43606.1 | KX160210_p9 | single strand annealing protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 3786 | 4301 |
| ANT43603.1 | KX160210_p6 | hypothetical protein | phrog_9675 | unknown function | unknown function | 1 | 2808 | 3002 |
| ANT43628.1 | KX160210_p31 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 14193 | 15434 |
| ANT43607.1 | KX160210_p10 | single strand DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4315 | 4866 |
| ANT43635.1 | KX160210_p38 | structural protein | phrog_1236 | head protein | head and packaging | 1 | 20067 | 20633 |
| ANT43598.1 | KX160210_p1 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 390 | 614 |
| ANT43625.1 | KX160210_p28 | hypothetical protein | phrog_21465 | unknown function | unknown function | 1 | 12848 | 13153 |
| ANT43644.1 | KX160210_p47 | tail associated lysin protein | phrog_538 | minor tail protein | tail | 1 | 26377 | 27492 |
| ANT43646.1 | KX160210_p49 | hypothetical protein | phrog_6453 | unknown function | unknown function | 1 | 28533 | 28835 |
| ANT43618.1 | KX160210_p21 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 10035 | 10487 |
| ANT43620.1 | KX160210_p23 | hypothetical protein | phrog_4000 | unknown function | unknown function | 1 | 10636 | 11097 |