Genomic map of Lactococcus phage 62502 (KX160210)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX160210
Definition
Lactococcus phage 62502, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
30616
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
36.08
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANT43610.1 KX160210_p13 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6659 7186
ANT43634.1 KX160210_p37 major head protein phrog_840 major head protein head and packaging 1 19035 19931
ANT43642.1 KX160210_p45 tapemeasure protein phrog_58 tail length tape measure protein tail 1 23299 25500
ANT43611.1 KX160210_p14 hypothetical protein phrog_3109 unknown function unknown function 1 7189 7428
ANT43609.1 KX160210_p12 helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 5744 6634
ANT43604.1 KX160210_p7 hypothetical protein phrog_5450 unknown function unknown function 1 3047 3283
ANT43632.1 KX160210_p35 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 18118 18765
ANT43613.1 KX160210_p16 hypothetical protein phrog_4314 unknown function unknown function 1 7891 8076
ANT43647.1 KX160210_p50 holin phrog_881 holin lysis 1 28825 29049
ANT43641.1 KX160210_p44 hypothetical protein phrog_1294 peptide methionine sulfoxide reductase other 1 23069 23299
ANT43638.1 KX160210_p41 tail terminator phrog_957 head protein head and packaging 1 21379 21750
ANT43614.1 KX160210_p17 hypothetical protein phrog_4149 unknown function unknown function 1 8070 8660
ANT43605.1 KX160210_p8 hypothetical protein phrog_4729 unknown function unknown function 1 3382 3777
ANT43631.1 KX160210_p34 hypothetical protein phrog_35720 unknown function unknown function 1 17887 18021
ANT43639.1 KX160210_p42 major tail protein phrog_885 major tail protein tail 1 21750 22598
ANT43637.1 KX160210_p40 activator of tail terminator phrog_5 tail completion or Neck1 protein connector 1 20960 21379
ANT43602.1 KX160210_p5 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 2015 2794
ANT43612.1 KX160210_p15 hypothetical protein phrog_5080 unknown function unknown function 1 7539 7745
ANT43648.1 KX160210_p51 endolysin phrog_291 endolysin lysis 1 29046 30335
ANT43622.1 KX160210_p25 hypothetical protein phrog_1071 DNA methyltransferase other 1 11549 12241
ANT43619.1 KX160210_p22 hypothetical protein phrog_21466 unknown function unknown function 1 10506 10658
ANT43649.1 KX160210_p52 hypothetical protein phrog_11039 unknown function unknown function 1 30411 30611
ANT43630.1 KX160210_p33 minor head protein phrog_115 minor head protein head and packaging 1 16860 17909
ANT43608.1 KX160210_p11 DNA replication protein phrog_1163 unknown function unknown function 1 5000 5734
ANT43621.1 KX160210_p24 hypothetical protein phrog_17991 unknown function unknown function 1 11094 11522
ANT43626.1 KX160210_p29 transcriptional activator phrog_2198 Alt-like transcription activator transcription regulation 1 13216 13641
ANT43643.1 KX160210_p46 distal tail protein phrog_33 distal tail protein Dit tail 1 25503 26375
ANT43623.1 KX160210_p26 hypothetical protein phrog_4501 unknown function unknown function 1 12229 12483
ANT43599.1 KX160210_p2 antirepressor phrog_373 anti-repressor transcription regulation 1 611 1357
ANT43640.1 KX160210_p43 hypothetical protein phrog_1021 unknown function unknown function 1 22623 22970
ANT43615.1 KX160210_p18 hypothetical protein phrog_8486 unknown function unknown function 1 8670 8942
ANT43624.1 KX160210_p27 hypothetical protein phrog_31993 unknown function unknown function 1 12480 12893
ANT43636.1 KX160210_p39 head-tail adapter protein phrog_1059 head-tail adaptor connector 1 20635 20955
ANT43627.1 KX160210_p30 terminase small subunit phrog_2538 terminase small subunit head and packaging 1 13793 14203
ANT43645.1 KX160210_p48 baseplate/receptor binding protein phrog_1220 head protein head and packaging 1 27489 28517
ANT43617.1 KX160210_p20 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9469 10071
ANT43600.1 KX160210_p3 hypothetical protein phrog_15116 unknown function unknown function 1 1371 1586
ANT43633.1 KX160210_p36 hypothetical protein phrog_13508 unknown function unknown function 1 18777 19019
ANT43616.1 KX160210_p19 hypothetical protein phrog_121 unknown function unknown function 1 8897 9499
ANT43601.1 KX160210_p4 repressor phrog_3 transcriptional repressor transcription regulation 1 1761 2003
ANT43629.1 KX160210_p32 portal protein phrog_64 portal protein head and packaging 1 15422 16855
ANT43606.1 KX160210_p9 single strand annealing protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 3786 4301
ANT43603.1 KX160210_p6 hypothetical protein phrog_9675 unknown function unknown function 1 2808 3002
ANT43628.1 KX160210_p31 terminase large subunit phrog_38 terminase large subunit head and packaging 1 14193 15434
ANT43607.1 KX160210_p10 single strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 4315 4866
ANT43635.1 KX160210_p38 structural protein phrog_1236 head protein head and packaging 1 20067 20633
ANT43598.1 KX160210_p1 Cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 390 614
ANT43625.1 KX160210_p28 hypothetical protein phrog_21465 unknown function unknown function 1 12848 13153
ANT43644.1 KX160210_p47 tail associated lysin protein phrog_538 minor tail protein tail 1 26377 27492
ANT43646.1 KX160210_p49 hypothetical protein phrog_6453 unknown function unknown function 1 28533 28835
ANT43618.1 KX160210_p21 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 10035 10487
ANT43620.1 KX160210_p23 hypothetical protein phrog_4000 unknown function unknown function 1 10636 11097