| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160211 |
Definition |
Lactococcus phage 62503, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
30556 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
36.32 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT43663.1 | KX160211_p14 | RusA-like resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 7011 | 7538 |
| ANT43651.1 | KX160211_p2 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 348 | 1094 |
| ANT43662.1 | KX160211_p13 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 6096 | 6986 |
| ANT43672.1 | KX160211_p23 | hypothetical protein | phrog_4000 | unknown function | unknown function | 1 | 10400 | 10969 |
| ANT43665.1 | KX160211_p16 | hypothetical protein | phrog_5080 | unknown function | unknown function | 1 | 7891 | 8097 |
| ANT43695.1 | KX160211_p46 | baseplate/receptor binding protein | phrog_1220 | head protein | head and packaging | 1 | 27431 | 28459 |
| ANT43659.1 | KX160211_p10 | single strand annealing protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4171 | 4686 |
| ANT43680.1 | KX160211_p31 | minor capsid protein | phrog_19443 | minor head protein | head and packaging | 1 | 15953 | 17698 |
| ANT43693.1 | KX160211_p44 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 25445 | 26317 |
| ANT43685.1 | KX160211_p36 | structural protein | phrog_1236 | head protein | head and packaging | 1 | 20009 | 20575 |
| ANT43660.1 | KX160211_p11 | single strand DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 4700 | 5179 |
| ANT43669.1 | KX160211_p20 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9227 | 9835 |
| ANT43683.1 | KX160211_p34 | hypothetical protein | phrog_13508 | unknown function | unknown function | 1 | 18719 | 18961 |
| ANT43697.1 | KX160211_p48 | holin | phrog_881 | holin | lysis | 1 | 28765 | 28989 |
| ANT43676.1 | KX160211_p27 | transcriptional activator | phrog_2198 | Alt-like transcription activator | transcription regulation | 1 | 12309 | 12734 |
| ANT43688.1 | KX160211_p39 | structural protein | phrog_957 | head protein | head and packaging | 1 | 21321 | 21692 |
| ANT43686.1 | KX160211_p37 | head-tail adapter protein | phrog_1059 | head-tail adaptor | connector | 1 | 20577 | 20897 |
| ANT43692.1 | KX160211_p43 | tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 23241 | 25442 |
| ANT43689.1 | KX160211_p40 | major tail protein | phrog_885 | major tail protein | tail | 1 | 21692 | 22540 |
| ANT43664.1 | KX160211_p15 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 7541 | 7780 |
| ANT43678.1 | KX160211_p29 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 13286 | 14527 |
| ANT43670.1 | KX160211_p21 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 9832 | 10251 |
| ANT43679.1 | KX160211_p30 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 14515 | 15948 |
| ANT43654.1 | KX160211_p5 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 2127 | 2369 |
| ANT43652.1 | KX160211_p3 | hypothetical protein | phrog_15116 | unknown function | unknown function | 1 | 1108 | 1302 |
| ANT43658.1 | KX160211_p9 | hypothetical protein | phrog_4729 | unknown function | unknown function | 1 | 3767 | 4162 |
| ANT43661.1 | KX160211_p12 | replisome organizer protein | phrog_1163 | unknown function | unknown function | 1 | 5313 | 6086 |
| ANT43657.1 | KX160211_p8 | hypothetical protein | phrog_5450 | unknown function | unknown function | 1 | 3432 | 3668 |
| ANT43650.1 | KX160211_p1 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 127 | 351 |
| ANT43667.1 | KX160211_p18 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 8421 | 8990 |
| ANT43655.1 | KX160211_p6 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 2382 | 3179 |
| ANT43666.1 | KX160211_p17 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 8243 | 8431 |
| ANT43691.1 | KX160211_p42 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 23011 | 23241 |
| ANT43681.1 | KX160211_p32 | hypothetical protein | phrog_22744 | unknown function | unknown function | 1 | 17702 | 17920 |
| ANT43675.1 | KX160211_p26 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 11974 | 12246 |
| ANT43698.1 | KX160211_p49 | endolysin | phrog_291 | endolysin | lysis | 1 | 28986 | 30275 |
| ANT43699.1 | KX160211_p50 | hypothetical protein | phrog_11039 | unknown function | unknown function | 1 | 30351 | 30551 |
| ANT43677.1 | KX160211_p28 | small terminase | phrog_2538 | terminase small subunit | head and packaging | 1 | 12886 | 13296 |
| ANT43668.1 | KX160211_p19 | hypothetical protein | phrog_8486 | unknown function | unknown function | 1 | 9000 | 9272 |
| ANT43673.1 | KX160211_p24 | hypothetical protein | phrog_1071 | DNA methyltransferase | other | 1 | 10996 | 11688 |
| ANT43656.1 | KX160211_p7 | hypothetical protein | phrog_9675 | unknown function | unknown function | 1 | 3193 | 3387 |
| ANT43682.1 | KX160211_p33 | scaffold protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 18060 | 18707 |
| ANT43671.1 | KX160211_p22 | hypothetical protein | phrog_21466 | unknown function | unknown function | 1 | 10270 | 10422 |
| ANT43674.1 | KX160211_p25 | hypothetical protein | phrog_4501 | unknown function | unknown function | 1 | 11735 | 11977 |
| ANT43690.1 | KX160211_p41 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 22565 | 22912 |
| ANT43687.1 | KX160211_p38 | activator of tail terminator | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20902 | 21321 |
| ANT43684.1 | KX160211_p35 | major capsid protein | phrog_840 | major head protein | head and packaging | 1 | 18977 | 19873 |
| ANT43694.1 | KX160211_p45 | tail-associated lysin | phrog_538 | minor tail protein | tail | 1 | 26319 | 27434 |
| ANT43653.1 | KX160211_p4 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 1314 | 1952 |
| ANT43696.1 | KX160211_p47 | hypothetical protein | phrog_6453 | unknown function | unknown function | 1 | 28473 | 28775 |