| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX160219 |
Definition |
Lactococcus phage C41431, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
31446 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
35.76 |
Number of singletons |
3 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT44093.1 | KX160219_p12 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 5569 | 5808 |
| ANT44117.1 | KX160219_p36 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 19342 | 19740 |
| ANT44102.1 | KX160219_p21 | hypothetical protein | phrog_10155 | unknown function | unknown function | 1 | 10099 | 10470 |
| ANT44110.1 | KX160219_p29 | HNH endonuclease | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 13493 | 14143 |
| ANT44114.1 | KX160219_p33 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 17662 | 18126 |
| ANT44103.1 | KX160219_p22 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 10467 | 10886 |
| ANT44130.1 | KX160219_p49 | holin | phrog_689 | holin | lysis | 1 | 29604 | 29828 |
| ANT44083.1 | KX160219_p2 | antirepressor | phrog_2977 | anti-repressor | transcription regulation | 1 | 340 | 801 |
| ANT44112.1 | KX160219_p31 | hypothetical protein | phrog_2494 | minor head protein | head and packaging | 1 | 15365 | 16129 |
| ANT44119.1 | KX160219_p38 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 20058 | 20294 |
| ANT44106.1 | KX160219_p25 | hypothetical protein | phrog_8817 | unknown function | unknown function | 1 | 11380 | 11565 |
| ANT44085.1 | KX160219_p4 | hypothetical protein | phrog_12961 | excisionase | integration and excision | 1 | 1472 | 1666 |
| ANT44105.1 | KX160219_p24 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 11178 | 11372 |
| ANT44108.1 | KX160219_p27 | transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | 1 | 11837 | 12373 |
| ANT44125.1 | KX160219_p44 | HTH endonuclease | phrog_2081 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22647 | 23069 |
| ANT44100.1 | KX160219_p19 | hypothetical protein | phrog_8486 | unknown function | unknown function | 1 | 9243 | 9515 |
| ANT44107.1 | KX160219_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11562 | 11747 |
| ANT44131.1 | KX160219_p50 | holin | phrog_263 | holin | lysis | 1 | 29842 | 30129 |
| ANT44124.1 | KX160219_p43 | tail tapemeasure protein | phrog_6900 | tail length tape measure protein | tail | 1 | 21890 | 22498 |
| ANT44099.1 | KX160219_p18 | LlaI methylase | phrog_27806 | DNA methyltransferase | other | 1 | 8159 | 9250 |
| ANT44126.1 | KX160219_p45 | tail tapemeasure protein | phrog_58 | tail length tape measure protein | tail | 1 | 23290 | 25230 |
| ANT44086.1 | KX160219_p5 | hypothetical protein | phrog_5450 | unknown function | unknown function | 1 | 1663 | 1929 |
| ANT44098.1 | KX160219_p17 | XRE family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 7941 | 8159 |
| ANT44116.1 | KX160219_p35 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 19041 | 19340 |
| ANT44095.1 | KX160219_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6446 | 6661 |
| ANT44096.1 | KX160219_p15 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 7130 | 7309 |
| ANT44091.1 | KX160219_p10 | DNA topoisomerase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 4427 | 5152 |
| ANT44104.1 | KX160219_p23 | hypothetical protein | phrog_4501 | unknown function | unknown function | 1 | 10939 | 11181 |
| ANT44089.1 | KX160219_p8 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 2961 | 3512 |
| ANT44090.1 | KX160219_p9 | replisome organizer protein | phrog_5708 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 3645 | 4427 |
| ANT44092.1 | KX160219_p11 | hypothetical protein | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 5149 | 5568 |
| ANT44133.1 | KX160219_p52 | lysin | singleton | unknown function | unknown function | 1 | 30570 | 30908 |
| ANT44128.1 | KX160219_p47 | receptor binding protein | phrog_6468 | tail fiber protein; host specificity | tail | 1 | 26770 | 29343 |
| ANT44111.1 | KX160219_p30 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 14136 | 15365 |
| ANT44120.1 | KX160219_p39 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 20295 | 20630 |
| ANT44121.1 | KX160219_p40 | major tail protein | phrog_117 | major tail protein | tail | 1 | 20641 | 21198 |
| ANT44084.1 | KX160219_p3 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 740 | 1459 |
| ANT44123.1 | KX160219_p42 | hypothetical protein | phrog_1633 | unknown function | unknown function | 1 | 21516 | 21884 |
| ANT44129.1 | KX160219_p48 | hypothetical protein | phrog_8250 | unknown function | unknown function | 1 | 29355 | 29591 |
| ANT44082.1 | KX160219_p1 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 86 | 328 |
| ANT44115.1 | KX160219_p34 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 18130 | 19026 |
| ANT44109.1 | KX160219_p28 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 12458 | 12889 |
| ANT44094.1 | KX160219_p13 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 6277 | 6456 |
| ANT44127.1 | KX160219_p46 | Dit | phrog_202 | distal tail protein Dit | tail | 1 | 25232 | 26770 |
| ANT44122.1 | KX160219_p41 | hypothetical protein | phrog_1526 | unknown function | unknown function | 1 | 21241 | 21501 |
| ANT44101.1 | KX160219_p20 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9518 | 10102 |
| ANT44132.1 | KX160219_p51 | hypothetical protein | phrog_30499 | unknown function | unknown function | -1 | 30218 | 30442 |
| ANT44088.1 | KX160219_p7 | single strand annealing protein | phrog_2324 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 2432 | 2947 |
| ANT44087.1 | KX160219_p6 | hypothetical protein | phrog_4729 | unknown function | unknown function | 1 | 2028 | 2423 |
| ANT44113.1 | KX160219_p32 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 16180 | 17589 |
| ANT44097.1 | KX160219_p16 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 7299 | 7868 |
| ANT44118.1 | KX160219_p37 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 19727 | 20065 |