Genomic map of Lactococcus phage C41431 (KX160219)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX160219
Definition
Lactococcus phage C41431, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
31446
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
35.76
Number of singletons
3
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANT44093.1 KX160219_p12 hypothetical protein phrog_3109 unknown function unknown function 1 5569 5808
ANT44117.1 KX160219_p36 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 19342 19740
ANT44102.1 KX160219_p21 hypothetical protein phrog_10155 unknown function unknown function 1 10099 10470
ANT44110.1 KX160219_p29 HNH endonuclease phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 13493 14143
ANT44114.1 KX160219_p33 scaffold protein phrog_233 head scaffolding protein head and packaging 1 17662 18126
ANT44103.1 KX160219_p22 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 10467 10886
ANT44130.1 KX160219_p49 holin phrog_689 holin lysis 1 29604 29828
ANT44083.1 KX160219_p2 antirepressor phrog_2977 anti-repressor transcription regulation 1 340 801
ANT44112.1 KX160219_p31 hypothetical protein phrog_2494 minor head protein head and packaging 1 15365 16129
ANT44119.1 KX160219_p38 hypothetical protein phrog_387 neck protein connector 1 20058 20294
ANT44106.1 KX160219_p25 hypothetical protein phrog_8817 unknown function unknown function 1 11380 11565
ANT44085.1 KX160219_p4 hypothetical protein phrog_12961 excisionase integration and excision 1 1472 1666
ANT44105.1 KX160219_p24 hypothetical protein phrog_2670 unknown function unknown function 1 11178 11372
ANT44108.1 KX160219_p27 transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 11837 12373
ANT44125.1 KX160219_p44 HTH endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22647 23069
ANT44100.1 KX160219_p19 hypothetical protein phrog_8486 unknown function unknown function 1 9243 9515
ANT44107.1 KX160219_p26 hypothetical protein singleton unknown function unknown function 1 11562 11747
ANT44131.1 KX160219_p50 holin phrog_263 holin lysis 1 29842 30129
ANT44124.1 KX160219_p43 tail tapemeasure protein phrog_6900 tail length tape measure protein tail 1 21890 22498
ANT44099.1 KX160219_p18 LlaI methylase phrog_27806 DNA methyltransferase other 1 8159 9250
ANT44126.1 KX160219_p45 tail tapemeasure protein phrog_58 tail length tape measure protein tail 1 23290 25230
ANT44086.1 KX160219_p5 hypothetical protein phrog_5450 unknown function unknown function 1 1663 1929
ANT44098.1 KX160219_p17 XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 7941 8159
ANT44116.1 KX160219_p35 hypothetical protein phrog_1539 Arc-like repressor transcription regulation 1 19041 19340
ANT44095.1 KX160219_p14 hypothetical protein singleton unknown function unknown function 1 6446 6661
ANT44096.1 KX160219_p15 hypothetical protein phrog_4314 unknown function unknown function 1 7130 7309
ANT44091.1 KX160219_p10 DNA topoisomerase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 4427 5152
ANT44104.1 KX160219_p23 hypothetical protein phrog_4501 unknown function unknown function 1 10939 11181
ANT44089.1 KX160219_p8 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 2961 3512
ANT44090.1 KX160219_p9 replisome organizer protein phrog_5708 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 3645 4427
ANT44092.1 KX160219_p11 hypothetical protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 5149 5568
ANT44133.1 KX160219_p52 lysin singleton unknown function unknown function 1 30570 30908
ANT44128.1 KX160219_p47 receptor binding protein phrog_6468 tail fiber protein; host specificity tail 1 26770 29343
ANT44111.1 KX160219_p30 portal protein phrog_104 portal protein head and packaging 1 14136 15365
ANT44120.1 KX160219_p39 hypothetical protein phrog_123 tail terminator connector 1 20295 20630
ANT44121.1 KX160219_p40 major tail protein phrog_117 major tail protein tail 1 20641 21198
ANT44084.1 KX160219_p3 antirepressor phrog_373 anti-repressor transcription regulation 1 740 1459
ANT44123.1 KX160219_p42 hypothetical protein phrog_1633 unknown function unknown function 1 21516 21884
ANT44129.1 KX160219_p48 hypothetical protein phrog_8250 unknown function unknown function 1 29355 29591
ANT44082.1 KX160219_p1 repressor phrog_3 transcriptional repressor transcription regulation 1 86 328
ANT44115.1 KX160219_p34 major capsid protein phrog_10 major head protein head and packaging 1 18130 19026
ANT44109.1 KX160219_p28 transcriptional activator phrog_36 transcriptional regulator transcription regulation 1 12458 12889
ANT44094.1 KX160219_p13 hypothetical protein phrog_4314 unknown function unknown function 1 6277 6456
ANT44127.1 KX160219_p46 Dit phrog_202 distal tail protein Dit tail 1 25232 26770
ANT44122.1 KX160219_p41 hypothetical protein phrog_1526 unknown function unknown function 1 21241 21501
ANT44101.1 KX160219_p20 hypothetical protein phrog_121 unknown function unknown function 1 9518 10102
ANT44132.1 KX160219_p51 hypothetical protein phrog_30499 unknown function unknown function -1 30218 30442
ANT44088.1 KX160219_p7 single strand annealing protein phrog_2324 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 2432 2947
ANT44087.1 KX160219_p6 hypothetical protein phrog_4729 unknown function unknown function 1 2028 2423
ANT44113.1 KX160219_p32 terminase large subunit phrog_9 terminase large subunit head and packaging 1 16180 17589
ANT44097.1 KX160219_p16 hypothetical protein phrog_4149 unknown function unknown function 1 7299 7868
ANT44118.1 KX160219_p37 hypothetical protein phrog_501 head closure Hc1 connector 1 19727 20065