| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX171209 |
Definition |
Pseudomonas phage vB_Pae575P-3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
DB of origin |
NUCCORE |
Length |
72728 |
Host Name |
Pseudomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
54.72 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANT44330.1 | KX171209_p54 | lysozyme | phrog_3108 | unknown function | unknown function | -1 | 28773 | 29297 |
| ANT44321.1 | KX171209_p45 | HNH endonuclease | phrog_10495 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22235 | 22426 |
| ANT44338.1 | KX171209_p62 | DNA primase P4 type | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37605 | 39773 |
| ANT44279.1 | KX171209_p3 | hypothetical protein | phrog_7624 | unknown function | unknown function | 1 | 805 | 996 |
| ANT44281.1 | KX171209_p5 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1238 | 1480 |
| ANT44302.1 | KX171209_p26 | hypothetical protein | phrog_6140 | unknown function | unknown function | 1 | 9242 | 9466 |
| ANT44333.1 | KX171209_p57 | hypothetical protein | phrog_3370 | unknown function | unknown function | -1 | 33127 | 33597 |
| ANT44317.1 | KX171209_p41 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18399 | 21014 |
| ANT44309.1 | KX171209_p33 | hypothetical protein | phrog_8112 | unknown function | unknown function | 1 | 12439 | 12624 |
| ANT44308.1 | KX171209_p32 | hypothetical protein | phrog_11608 | unknown function | unknown function | 1 | 12131 | 12430 |
| ANT44283.1 | KX171209_p7 | hypothetical protein | phrog_2614 | unknown function | unknown function | 1 | 1735 | 2043 |
| ANT44313.1 | KX171209_p37 | hypothetical protein | phrog_14291 | unknown function | unknown function | 1 | 14893 | 15387 |
| ANT44342.1 | KX171209_p66 | hypothetical protein | phrog_3934 | unknown function | unknown function | 1 | 41695 | 42138 |
| ANT44307.1 | KX171209_p31 | hypothetical protein | phrog_12464 | unknown function | unknown function | 1 | 11740 | 11964 |
| ANT44296.1 | KX171209_p20 | RNA polymerase small subunit | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5843 | 6775 |
| ANT44298.1 | KX171209_p22 | hypothetical protein | phrog_14277 | unknown function | unknown function | 1 | 7083 | 7367 |
| ANT44312.1 | KX171209_p36 | ATPase | phrog_1297 | ATPase | other | 1 | 13787 | 14857 |
| ANT44332.1 | KX171209_p56 | tail fiber protein | phrog_7697 | tail fiber protein | tail | -1 | 29843 | 33088 |
| ANT44359.1 | KX171209_p83 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 66475 | 66894 |
| ANT44362.1 | KX171209_p86 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | -1 | 67961 | 69613 |
| ANT44305.1 | KX171209_p29 | hypothetical protein | phrog_8451 | unknown function | unknown function | 1 | 10647 | 11228 |
| ANT44358.1 | KX171209_p82 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 63795 | 66440 |
| ANT44311.1 | KX171209_p35 | cell division protein | phrog_4781 | unknown function | unknown function | 1 | 13513 | 13755 |
| ANT44320.1 | KX171209_p44 | hypothetical protein | phrog_8620 | unknown function | unknown function | 1 | 21840 | 22238 |
| ANT44344.1 | KX171209_p68 | hypothetical protein | phrog_7564 | unknown function | unknown function | 1 | 42698 | 43135 |
| ANT44284.1 | KX171209_p8 | hypothetical protein | phrog_8449 | unknown function | unknown function | 1 | 2027 | 2329 |
| ANT44361.1 | KX171209_p85 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 67230 | 67964 |
| ANT44324.1 | KX171209_p48 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 24959 | 26737 |
| ANT44329.1 | KX171209_p53 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | -1 | 28264 | 28818 |
| ANT44328.1 | KX171209_p52 | hypothetical protein | phrog_8796 | unknown function | unknown function | 1 | 27644 | 28201 |
| ANT44293.1 | KX171209_p17 | hypothetical protein | phrog_7756 | unknown function | unknown function | 1 | 4753 | 5004 |
| ANT44343.1 | KX171209_p67 | DNA packaging B protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 42126 | 42686 |
| ANT44285.1 | KX171209_p9 | hypothetical protein | phrog_8477 | unknown function | unknown function | 1 | 2333 | 2536 |
| ANT44365.1 | KX171209_p89 | hypothetical protein | phrog_8800 | unknown function | unknown function | 1 | 70836 | 71048 |
| ANT44354.1 | KX171209_p78 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 60241 | 60906 |
| ANT44349.1 | KX171209_p73 | virion associated RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 44783 | 54979 |
| ANT44289.1 | KX171209_p13 | hypothetical protein | phrog_8570 | unknown function | unknown function | 1 | 3305 | 3490 |
| ANT44310.1 | KX171209_p34 | ATP-dependent Clp protease ATP-binding subunit ClpX | phrog_5534 | unknown function | unknown function | 1 | 12683 | 13516 |
| ANT44290.1 | KX171209_p14 | toxin TX1 | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 3584 | 3874 |
| ANT44306.1 | KX171209_p30 | hypothetical protein | phrog_8374 | unknown function | unknown function | 1 | 11228 | 11743 |
| ANT44331.1 | KX171209_p55 | hypothetical protein | phrog_2687 | unknown function | unknown function | -1 | 29294 | 29488 |
| ANT44346.1 | KX171209_p70 | hypothetical protein | phrog_8394 | unknown function | unknown function | 1 | 43877 | 44239 |
| ANT44347.1 | KX171209_p71 | dUTP diphosphatase | phrog_7891 | unknown function | unknown function | 1 | 44236 | 44553 |
| ANT44334.1 | KX171209_p58 | tail fiber protein | phrog_496 | tail fiber protein | tail | -1 | 34091 | 35404 |
| ANT44314.1 | KX171209_p38 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15387 | 16616 |
| ANT44292.1 | KX171209_p16 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 4352 | 4753 |
| ANT44286.1 | KX171209_p10 | hypothetical protein | phrog_8885 | unknown function | unknown function | 1 | 2566 | 2784 |
| ANT44368.1 | KX171209_p92 | hypothetical protein | phrog_8657 | unknown function | unknown function | 1 | 71810 | 72472 |
| ANT44301.1 | KX171209_p25 | hypothetical protein | phrog_8738 | unknown function | unknown function | 1 | 9017 | 9169 |
| ANT44341.1 | KX171209_p65 | hypothetical protein | phrog_6026 | unknown function | unknown function | 1 | 41333 | 41698 |
| ANT44303.1 | KX171209_p27 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 9470 | 10096 |
| ANT44337.1 | KX171209_p61 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36580 | 37590 |
| ANT44364.1 | KX171209_p88 | hypothetical protein | phrog_9047 | unknown function | unknown function | 1 | 70405 | 70836 |
| ANT44350.1 | KX171209_p74 | hypothetical protein | phrog_6467 | unknown function | unknown function | -1 | 54980 | 56545 |
| ANT44282.1 | KX171209_p6 | hypothetical protein | phrog_7875 | unknown function | unknown function | 1 | 1480 | 1731 |
| ANT44367.1 | KX171209_p91 | hypothetical protein | phrog_9146 | unknown function | unknown function | 1 | 71296 | 71604 |
| ANT44280.1 | KX171209_p4 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1011 | 1241 |
| ANT44353.1 | KX171209_p77 | structural protein | phrog_2050 | virion structural protein | head and packaging | -1 | 59272 | 60237 |
| ANT44277.1 | KX171209_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31 | 144 |
| ANT44355.1 | KX171209_p79 | major coat protein | phrog_1357 | major head protein | head and packaging | -1 | 60963 | 62162 |
| ANT44300.1 | KX171209_p24 | RNA polymerase large subunit | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7678 | 8919 |
| ANT44278.1 | KX171209_p2 | hypothetical protein | phrog_6483 | unknown function | unknown function | 1 | 162 | 416 |
| ANT44336.1 | KX171209_p60 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 36198 | 36578 |
| ANT44304.1 | KX171209_p28 | hypothetical protein | phrog_8613 | unknown function | unknown function | 1 | 10093 | 10647 |
| ANT44294.1 | KX171209_p18 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 5004 | 5444 |
| ANT44325.1 | KX171209_p49 | hypothetical protein | phrog_7722 | unknown function | unknown function | 1 | 26785 | 27009 |
| ANT44340.1 | KX171209_p64 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40583 | 41329 |
| ANT44299.1 | KX171209_p23 | hypothetical protein | phrog_8144 | unknown function | unknown function | 1 | 7371 | 7643 |
| ANT44318.1 | KX171209_p42 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 21147 | 21665 |
| ANT44327.1 | KX171209_p51 | HNH endonuclease | phrog_8307 | unknown function | unknown function | 1 | 27460 | 27651 |
| ANT44322.1 | KX171209_p46 | rIIA lysis inhibitor | singleton | unknown function | unknown function | 1 | 22430 | 22837 |
| ANT44352.1 | KX171209_p76 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 56993 | 59215 |
| ANT44323.1 | KX171209_p47 | rIIA lysis inhibitor | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 22821 | 24947 |
| ANT44288.1 | KX171209_p12 | hypothetical protein | phrog_8895 | unknown function | unknown function | 1 | 3011 | 3232 |
| ANT44348.1 | KX171209_p72 | hypothetical protein | phrog_8152 | unknown function | unknown function | 1 | 44563 | 44766 |
| ANT44326.1 | KX171209_p50 | hypothetical protein | phrog_18580 | unknown function | unknown function | 1 | 27210 | 27410 |
| ANT44315.1 | KX171209_p39 | RecD-like DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 16706 | 17872 |
| ANT44319.1 | KX171209_p43 | hypothetical protein | phrog_10189 | unknown function | unknown function | 1 | 21697 | 21837 |
| ANT44363.1 | KX171209_p87 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 69610 | 70338 |
| ANT44291.1 | KX171209_p15 | hypothetical protein | phrog_8775 | unknown function | unknown function | 1 | 4059 | 4352 |
| ANT44287.1 | KX171209_p11 | hypothetical protein | phrog_8334 | unknown function | unknown function | 1 | 2781 | 3014 |
| ANT44356.1 | KX171209_p80 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | -1 | 62197 | 63387 |
| ANT44360.1 | KX171209_p84 | hypothetical protein | phrog_8880 | unknown function | unknown function | 1 | 66898 | 67197 |
| ANT44316.1 | KX171209_p40 | hypothetical protein | phrog_7095 | unknown function | unknown function | 1 | 17872 | 18399 |
| ANT44357.1 | KX171209_p81 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 63387 | 63725 |
| ANT44295.1 | KX171209_p19 | hypothetical protein | phrog_8585 | unknown function | unknown function | 1 | 5484 | 5831 |
| ANT44297.1 | KX171209_p21 | hypothetical protein | phrog_8597 | unknown function | unknown function | 1 | 6788 | 7048 |
| ANT44339.1 | KX171209_p63 | RecA-like NTPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39822 | 40556 |
| ANT44335.1 | KX171209_p59 | hypothetical protein | phrog_3360 | unknown function | unknown function | 1 | 35773 | 36201 |
| ANT44366.1 | KX171209_p90 | hypothetical protein | phrog_10651 | unknown function | unknown function | 1 | 71045 | 71305 |
| ANT44351.1 | KX171209_p75 | hypothetical protein | phrog_2646 | unknown function | unknown function | -1 | 56545 | 57012 |
| ANT44345.1 | KX171209_p69 | hypothetical protein | phrog_7212 | unknown function | unknown function | 1 | 43193 | 43597 |