Genomic map of Pseudomonas phage vB_Pae575P-3 (KX171209)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX171209
Definition
Pseudomonas phage vB_Pae575P-3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus.
DB of origin
NUCCORE
Length
72728
Host Name
Pseudomonas
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
54.72
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANT44330.1 KX171209_p54 lysozyme phrog_3108 unknown function unknown function -1 28773 29297
ANT44321.1 KX171209_p45 HNH endonuclease phrog_10495 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22235 22426
ANT44338.1 KX171209_p62 DNA primase P4 type phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 37605 39773
ANT44279.1 KX171209_p3 hypothetical protein phrog_7624 unknown function unknown function 1 805 996
ANT44281.1 KX171209_p5 hypothetical protein phrog_3968 unknown function unknown function 1 1238 1480
ANT44302.1 KX171209_p26 hypothetical protein phrog_6140 unknown function unknown function 1 9242 9466
ANT44333.1 KX171209_p57 hypothetical protein phrog_3370 unknown function unknown function -1 33127 33597
ANT44317.1 KX171209_p41 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18399 21014
ANT44309.1 KX171209_p33 hypothetical protein phrog_8112 unknown function unknown function 1 12439 12624
ANT44308.1 KX171209_p32 hypothetical protein phrog_11608 unknown function unknown function 1 12131 12430
ANT44283.1 KX171209_p7 hypothetical protein phrog_2614 unknown function unknown function 1 1735 2043
ANT44313.1 KX171209_p37 hypothetical protein phrog_14291 unknown function unknown function 1 14893 15387
ANT44342.1 KX171209_p66 hypothetical protein phrog_3934 unknown function unknown function 1 41695 42138
ANT44307.1 KX171209_p31 hypothetical protein phrog_12464 unknown function unknown function 1 11740 11964
ANT44296.1 KX171209_p20 RNA polymerase small subunit phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 5843 6775
ANT44298.1 KX171209_p22 hypothetical protein phrog_14277 unknown function unknown function 1 7083 7367
ANT44312.1 KX171209_p36 ATPase phrog_1297 ATPase other 1 13787 14857
ANT44332.1 KX171209_p56 tail fiber protein phrog_7697 tail fiber protein tail -1 29843 33088
ANT44359.1 KX171209_p83 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 66475 66894
ANT44362.1 KX171209_p86 terminase large subunit phrog_38 terminase large subunit head and packaging -1 67961 69613
ANT44305.1 KX171209_p29 hypothetical protein phrog_8451 unknown function unknown function 1 10647 11228
ANT44358.1 KX171209_p82 portal protein phrog_1216 portal protein head and packaging -1 63795 66440
ANT44311.1 KX171209_p35 cell division protein phrog_4781 unknown function unknown function 1 13513 13755
ANT44320.1 KX171209_p44 hypothetical protein phrog_8620 unknown function unknown function 1 21840 22238
ANT44344.1 KX171209_p68 hypothetical protein phrog_7564 unknown function unknown function 1 42698 43135
ANT44284.1 KX171209_p8 hypothetical protein phrog_8449 unknown function unknown function 1 2027 2329
ANT44361.1 KX171209_p85 hypothetical protein phrog_2125 virion structural protein head and packaging -1 67230 67964
ANT44324.1 KX171209_p48 hypothetical protein phrog_2886 RIIB lysis inhibitor lysis 1 24959 26737
ANT44329.1 KX171209_p53 hypothetical protein phrog_312 Rz-like spanin lysis -1 28264 28818
ANT44328.1 KX171209_p52 hypothetical protein phrog_8796 unknown function unknown function 1 27644 28201
ANT44293.1 KX171209_p17 hypothetical protein phrog_7756 unknown function unknown function 1 4753 5004
ANT44343.1 KX171209_p67 DNA packaging B protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 42126 42686
ANT44285.1 KX171209_p9 hypothetical protein phrog_8477 unknown function unknown function 1 2333 2536
ANT44365.1 KX171209_p89 hypothetical protein phrog_8800 unknown function unknown function 1 70836 71048
ANT44354.1 KX171209_p78 hypothetical protein phrog_2130 unknown function unknown function -1 60241 60906
ANT44349.1 KX171209_p73 virion associated RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 44783 54979
ANT44289.1 KX171209_p13 hypothetical protein phrog_8570 unknown function unknown function 1 3305 3490
ANT44310.1 KX171209_p34 ATP-dependent Clp protease ATP-binding subunit ClpX phrog_5534 unknown function unknown function 1 12683 13516
ANT44290.1 KX171209_p14 toxin TX1 phrog_6271 toxin moron, auxiliary metabolic gene and host takeover 1 3584 3874
ANT44306.1 KX171209_p30 hypothetical protein phrog_8374 unknown function unknown function 1 11228 11743
ANT44331.1 KX171209_p55 hypothetical protein phrog_2687 unknown function unknown function -1 29294 29488
ANT44346.1 KX171209_p70 hypothetical protein phrog_8394 unknown function unknown function 1 43877 44239
ANT44347.1 KX171209_p71 dUTP diphosphatase phrog_7891 unknown function unknown function 1 44236 44553
ANT44334.1 KX171209_p58 tail fiber protein phrog_496 tail fiber protein tail -1 34091 35404
ANT44314.1 KX171209_p38 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15387 16616
ANT44292.1 KX171209_p16 hypothetical protein phrog_2072 unknown function unknown function 1 4352 4753
ANT44286.1 KX171209_p10 hypothetical protein phrog_8885 unknown function unknown function 1 2566 2784
ANT44368.1 KX171209_p92 hypothetical protein phrog_8657 unknown function unknown function 1 71810 72472
ANT44301.1 KX171209_p25 hypothetical protein phrog_8738 unknown function unknown function 1 9017 9169
ANT44341.1 KX171209_p65 hypothetical protein phrog_6026 unknown function unknown function 1 41333 41698
ANT44303.1 KX171209_p27 hypothetical protein phrog_7111 unknown function unknown function 1 9470 10096
ANT44337.1 KX171209_p61 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 36580 37590
ANT44364.1 KX171209_p88 hypothetical protein phrog_9047 unknown function unknown function 1 70405 70836
ANT44350.1 KX171209_p74 hypothetical protein phrog_6467 unknown function unknown function -1 54980 56545
ANT44282.1 KX171209_p6 hypothetical protein phrog_7875 unknown function unknown function 1 1480 1731
ANT44367.1 KX171209_p91 hypothetical protein phrog_9146 unknown function unknown function 1 71296 71604
ANT44280.1 KX171209_p4 hypothetical protein phrog_3968 unknown function unknown function 1 1011 1241
ANT44353.1 KX171209_p77 structural protein phrog_2050 virion structural protein head and packaging -1 59272 60237
ANT44277.1 KX171209_p1 hypothetical protein singleton unknown function unknown function -1 31 144
ANT44355.1 KX171209_p79 major coat protein phrog_1357 major head protein head and packaging -1 60963 62162
ANT44300.1 KX171209_p24 RNA polymerase large subunit phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 7678 8919
ANT44278.1 KX171209_p2 hypothetical protein phrog_6483 unknown function unknown function 1 162 416
ANT44336.1 KX171209_p60 hypothetical protein phrog_2452 unknown function unknown function 1 36198 36578
ANT44304.1 KX171209_p28 hypothetical protein phrog_8613 unknown function unknown function 1 10093 10647
ANT44294.1 KX171209_p18 hypothetical protein phrog_335 phosphatase other 1 5004 5444
ANT44325.1 KX171209_p49 hypothetical protein phrog_7722 unknown function unknown function 1 26785 27009
ANT44340.1 KX171209_p64 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 40583 41329
ANT44299.1 KX171209_p23 hypothetical protein phrog_8144 unknown function unknown function 1 7371 7643
ANT44318.1 KX171209_p42 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 21147 21665
ANT44327.1 KX171209_p51 HNH endonuclease phrog_8307 unknown function unknown function 1 27460 27651
ANT44322.1 KX171209_p46 rIIA lysis inhibitor singleton unknown function unknown function 1 22430 22837
ANT44352.1 KX171209_p76 hypothetical protein phrog_2220 unknown function unknown function -1 56993 59215
ANT44323.1 KX171209_p47 rIIA lysis inhibitor phrog_2979 RIIA lysis inhibitor lysis 1 22821 24947
ANT44288.1 KX171209_p12 hypothetical protein phrog_8895 unknown function unknown function 1 3011 3232
ANT44348.1 KX171209_p72 hypothetical protein phrog_8152 unknown function unknown function 1 44563 44766
ANT44326.1 KX171209_p50 hypothetical protein phrog_18580 unknown function unknown function 1 27210 27410
ANT44315.1 KX171209_p39 RecD-like DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 16706 17872
ANT44319.1 KX171209_p43 hypothetical protein phrog_10189 unknown function unknown function 1 21697 21837
ANT44363.1 KX171209_p87 hypothetical protein phrog_2109 unknown function unknown function -1 69610 70338
ANT44291.1 KX171209_p15 hypothetical protein phrog_8775 unknown function unknown function 1 4059 4352
ANT44287.1 KX171209_p11 hypothetical protein phrog_8334 unknown function unknown function 1 2781 3014
ANT44356.1 KX171209_p80 hypothetical protein phrog_2120 tail length tape measure protein tail -1 62197 63387
ANT44360.1 KX171209_p84 hypothetical protein phrog_8880 unknown function unknown function 1 66898 67197
ANT44316.1 KX171209_p40 hypothetical protein phrog_7095 unknown function unknown function 1 17872 18399
ANT44357.1 KX171209_p81 hypothetical protein phrog_2346 unknown function unknown function -1 63387 63725
ANT44295.1 KX171209_p19 hypothetical protein phrog_8585 unknown function unknown function 1 5484 5831
ANT44297.1 KX171209_p21 hypothetical protein phrog_8597 unknown function unknown function 1 6788 7048
ANT44339.1 KX171209_p63 RecA-like NTPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39822 40556
ANT44335.1 KX171209_p59 hypothetical protein phrog_3360 unknown function unknown function 1 35773 36201
ANT44366.1 KX171209_p90 hypothetical protein phrog_10651 unknown function unknown function 1 71045 71305
ANT44351.1 KX171209_p75 hypothetical protein phrog_2646 unknown function unknown function -1 56545 57012
ANT44345.1 KX171209_p69 hypothetical protein phrog_7212 unknown function unknown function 1 43193 43597