Genomic map of Lactobacillus phage P1 (KX223815)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX223815
Definition
Lactobacillus phage P1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Maenadvirus; Lactobacillus virus P1.
DB of origin
NUCCORE
Length
73787
Host Name
Lactobacillus plantarum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
38.96
Number of singletons
2
Number of paralogs
7

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANO57944.1 KX223815_p15 tape measure protein phrog_167 tail length tape measure protein tail 1 12500 18163
ANO58012.1 KX223815_p83 hypothetical protein phrog_3784 unknown function unknown function 1 64956 65396
ANO57974.1 KX223815_p45 hypothetical protein phrog_13644 unknown function unknown function -1 43337 43687
ANO57937.1 KX223815_p8 tail protein phrog_341 major tail protein tail 1 9040 9495
ANO58009.1 KX223815_p80 hypothetical protein phrog_419 unknown function unknown function 1 63820 64263
ANO57947.1 KX223815_p18 tail fiber protein phrog_7660 tail fiber protein tail 1 22453 25872
ANO57970.1 KX223815_p41 hypothetical protein phrog_21548 unknown function unknown function -1 42091 42435
ANO57983.1 KX223815_p54 hypothetical protein phrog_16289 unknown function unknown function -1 49759 49941
ANO57967.1 KX223815_p38 PemK family transcriptional regulator phrog_1936 MazF-like growth inhibitor moron, auxiliary metabolic gene and host takeover -1 40858 41220
ANO57954.1 KX223815_p25 recombinase/integrase phrog_1 integrase integration and excision 1 30149 31120
ANO57951.1 KX223815_p22 hypothetical protein phrog_291 endolysin lysis 1 27756 29147
ANO57999.1 KX223815_p70 hypothetical protein phrog_18956 unknown function unknown function 1 59914 60360
ANO57940.1 KX223815_p11 head-tail adaptor phrog_5 tail completion or Neck1 protein connector 1 10249 10701
ANO57973.1 KX223815_p44 hypothetical protein phrog_13644 unknown function unknown function -1 42914 43267
ANO58007.1 KX223815_p78 hypothetical protein phrog_98 unknown function unknown function 1 62933 63412
ANO57942.1 KX223815_p13 major tail protein phrog_88 major tail protein tail 1 11104 11721
ANO57987.1 KX223815_p58 hypothetical protein phrog_1225 unknown function unknown function 1 51938 52435
ANO58014.1 KX223815_p85 hypothetical protein phrog_17062 unknown function unknown function 1 65662 66057
ANO58004.1 KX223815_p75 hypothetical protein phrog_21587 unknown function unknown function 1 61821 62252
ANO57938.1 KX223815_p9 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 9536 9823
ANO57945.1 KX223815_p16 distal tail protein phrog_202 distal tail protein Dit tail 1 18225 20009
ANO57931.1 KX223815_p2 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1631 2137
ANO58011.1 KX223815_p82 hypothetical protein phrog_17627 unknown function unknown function 1 64783 64956
ANO57961.1 KX223815_p32 hypothetical protein phrog_18732 unknown function unknown function -1 37539 37853
ANO57956.1 KX223815_p27 DNA polymerase phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 31424 35284
ANO57991.1 KX223815_p62 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 53897 55501
ANO57935.1 KX223815_p6 prohead protease phrog_13042 major head protein head and packaging 1 6395 7615
ANO58013.1 KX223815_p84 hypothetical protein phrog_15521 unknown function unknown function 1 65402 65554
ANO57980.1 KX223815_p51 hypothetical protein phrog_14233 unknown function unknown function -1 48686 49003
ANO57949.1 KX223815_p20 hypothetical protein phrog_1401 unknown function unknown function 1 26132 26554
ANO57930.1 KX223815_p1 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1236 1616
ANO57993.1 KX223815_p64 single-stranded-DNA-specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism 1 56548 58290
ANO58005.1 KX223815_p76 hypothetical protein phrog_98 unknown function unknown function 1 62264 62635
ANO58000.1 KX223815_p71 hypothetical protein phrog_23702 unknown function unknown function 1 60460 60714
ANO57957.1 KX223815_p28 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 35306 35950
ANO57984.1 KX223815_p55 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 49945 50556
ANO57932.1 KX223815_p3 hypothetical protein phrog_918 unknown function unknown function 1 2335 2595
ANO58002.1 KX223815_p73 DNA binding protein phrog_715 MazG-like pyrophosphatase other 1 61127 61435
ANO57994.1 KX223815_p65 hypothetical protein phrog_19051 unknown function unknown function 1 58495 58815
ANO57998.1 KX223815_p69 hypothetical protein phrog_17195 unknown function unknown function 1 59703 59945
ANO57971.1 KX223815_p42 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42432 42755
ANO57982.1 KX223815_p53 hypothetical protein phrog_15790 unknown function unknown function -1 49442 49684
ANO58001.1 KX223815_p72 hypothetical protein phrog_6670 unknown function unknown function 1 60732 61127
ANO58003.1 KX223815_p74 hypothetical protein phrog_30787 unknown function unknown function 1 61438 61719
ANO57976.1 KX223815_p47 membrane protein phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover -1 44372 45109
ANO57996.1 KX223815_p67 hypothetical protein phrog_4915 unknown function unknown function 1 59005 59385
ANO57952.1 KX223815_p23 hypothetical protein phrog_1009 unknown function unknown function 1 29165 29494
ANO57943.1 KX223815_p14 hypothetical protein phrog_1346 tail protein tail 1 11849 12247
ANO57989.1 KX223815_p60 hypothetical protein phrog_16438 unknown function unknown function 1 53161 53361
ANO57969.1 KX223815_p40 hypothetical protein phrog_2316 unknown function unknown function -1 41465 42079
ANO57963.1 KX223815_p34 extracellular transglycosylase phrog_4602 transglycosylase other -1 38295 39023
ANO57985.1 KX223815_p56 hypothetical protein singleton unknown function unknown function 1 50678 50794
ANO57978.1 KX223815_p49 ATP/GTP-binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 46393 47436
ANO57955.1 KX223815_p26 hypothetical protein phrog_13351 unknown function unknown function 1 31138 31386
ANO57950.1 KX223815_p21 hypothetical protein phrog_20633 tail protein tail 1 26571 27683
ANO57977.1 KX223815_p48 DNA polymerase phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 45154 46386
ANO57975.1 KX223815_p46 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 43771 44286
ANO57948.1 KX223815_p19 hypothetical protein phrog_28564 unknown function unknown function 1 25872 26114
ANO57958.1 KX223815_p29 hypothetical protein phrog_15801 unknown function unknown function -1 36054 36383
ANO57990.1 KX223815_p61 hypothetical protein phrog_4680 unknown function unknown function 1 53446 53919
ANO57968.1 KX223815_p39 hypothetical protein singleton unknown function unknown function -1 41279 41413
ANO57986.1 KX223815_p57 hypothetical protein phrog_15734 unknown function unknown function 1 51673 51957
ANO57965.1 KX223815_p36 hypothetical protein phrog_5083 unknown function unknown function -1 40006 40539
ANO57981.1 KX223815_p52 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 49006 49440
ANO57946.1 KX223815_p17 baseplate protein tal-like protein phrog_4798 tail protein tail 1 20063 22441
ANO57936.1 KX223815_p7 major capsid protein phrog_10 major head protein head and packaging 1 7619 8908
ANO57972.1 KX223815_p43 hypothetical protein phrog_20638 unknown function unknown function -1 42745 42900
ANO58015.1 KX223815_p86 thymidine kinase phrog_592 thymidine kinase other 1 66060 66719
ANO57966.1 KX223815_p37 hypothetical protein phrog_14545 unknown function unknown function -1 40532 40861
ANO58010.1 KX223815_p81 hypothetical protein phrog_4182 unknown function unknown function 1 64260 64766
ANO57941.1 KX223815_p12 tail protein phrog_1217 tail protein tail 1 10705 11082
ANO57988.1 KX223815_p59 deoxynucleoside kinase phrog_761 thymidylate kinase other 1 52454 53161
ANO57933.1 KX223815_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 3223 4935
ANO57939.1 KX223815_p10 head-tail joining protein phrog_25 head closure Hc1 connector 1 9840 10259
ANO57934.1 KX223815_p5 hk97 family portal protein phrog_12 portal protein head and packaging 1 5047 6405
ANO57959.1 KX223815_p30 hypothetical protein phrog_14203 unknown function unknown function -1 36364 36672
ANO58006.1 KX223815_p77 hypothetical protein phrog_13264 unknown function unknown function 1 62638 62916
ANO57960.1 KX223815_p31 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 36672 37298
ANO57997.1 KX223815_p68 hypothetical protein phrog_19276 unknown function unknown function 1 59378 59710
ANO58008.1 KX223815_p79 hypothetical protein phrog_419 unknown function unknown function 1 63409 63816
ANO57953.1 KX223815_p24 hypothetical protein phrog_25772 unknown function unknown function 1 29491 30087
ANO57992.1 KX223815_p63 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 55514 56551
ANO57964.1 KX223815_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 39108 39929
ANO57962.1 KX223815_p33 hypothetical protein phrog_20950 unknown function unknown function -1 37850 38206
ANO57995.1 KX223815_p66 hypothetical protein phrog_36813 unknown function unknown function 1 58819 58992
ANO57979.1 KX223815_p50 hypothetical protein phrog_2367 unknown function unknown function -1 47496 48479