| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX223815 |
Definition |
Lactobacillus phage P1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Maenadvirus; Lactobacillus virus P1. |
DB of origin |
NUCCORE |
Length |
73787 |
Host Name |
Lactobacillus plantarum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
38.96 |
Number of singletons |
2 |
Number of paralogs |
7 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANO57944.1 | KX223815_p15 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 12500 | 18163 |
| ANO58012.1 | KX223815_p83 | hypothetical protein | phrog_3784 | unknown function | unknown function | 1 | 64956 | 65396 |
| ANO57974.1 | KX223815_p45 | hypothetical protein | phrog_13644 | unknown function | unknown function | -1 | 43337 | 43687 |
| ANO57937.1 | KX223815_p8 | tail protein | phrog_341 | major tail protein | tail | 1 | 9040 | 9495 |
| ANO58009.1 | KX223815_p80 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 63820 | 64263 |
| ANO57947.1 | KX223815_p18 | tail fiber protein | phrog_7660 | tail fiber protein | tail | 1 | 22453 | 25872 |
| ANO57970.1 | KX223815_p41 | hypothetical protein | phrog_21548 | unknown function | unknown function | -1 | 42091 | 42435 |
| ANO57983.1 | KX223815_p54 | hypothetical protein | phrog_16289 | unknown function | unknown function | -1 | 49759 | 49941 |
| ANO57967.1 | KX223815_p38 | PemK family transcriptional regulator | phrog_1936 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 40858 | 41220 |
| ANO57954.1 | KX223815_p25 | recombinase/integrase | phrog_1 | integrase | integration and excision | 1 | 30149 | 31120 |
| ANO57951.1 | KX223815_p22 | hypothetical protein | phrog_291 | endolysin | lysis | 1 | 27756 | 29147 |
| ANO57999.1 | KX223815_p70 | hypothetical protein | phrog_18956 | unknown function | unknown function | 1 | 59914 | 60360 |
| ANO57940.1 | KX223815_p11 | head-tail adaptor | phrog_5 | tail completion or Neck1 protein | connector | 1 | 10249 | 10701 |
| ANO57973.1 | KX223815_p44 | hypothetical protein | phrog_13644 | unknown function | unknown function | -1 | 42914 | 43267 |
| ANO58007.1 | KX223815_p78 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 62933 | 63412 |
| ANO57942.1 | KX223815_p13 | major tail protein | phrog_88 | major tail protein | tail | 1 | 11104 | 11721 |
| ANO57987.1 | KX223815_p58 | hypothetical protein | phrog_1225 | unknown function | unknown function | 1 | 51938 | 52435 |
| ANO58014.1 | KX223815_p85 | hypothetical protein | phrog_17062 | unknown function | unknown function | 1 | 65662 | 66057 |
| ANO58004.1 | KX223815_p75 | hypothetical protein | phrog_21587 | unknown function | unknown function | 1 | 61821 | 62252 |
| ANO57938.1 | KX223815_p9 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 9536 | 9823 |
| ANO57945.1 | KX223815_p16 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 18225 | 20009 |
| ANO57931.1 | KX223815_p2 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1631 | 2137 |
| ANO58011.1 | KX223815_p82 | hypothetical protein | phrog_17627 | unknown function | unknown function | 1 | 64783 | 64956 |
| ANO57961.1 | KX223815_p32 | hypothetical protein | phrog_18732 | unknown function | unknown function | -1 | 37539 | 37853 |
| ANO57956.1 | KX223815_p27 | DNA polymerase | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 31424 | 35284 |
| ANO57991.1 | KX223815_p62 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 53897 | 55501 |
| ANO57935.1 | KX223815_p6 | prohead protease | phrog_13042 | major head protein | head and packaging | 1 | 6395 | 7615 |
| ANO58013.1 | KX223815_p84 | hypothetical protein | phrog_15521 | unknown function | unknown function | 1 | 65402 | 65554 |
| ANO57980.1 | KX223815_p51 | hypothetical protein | phrog_14233 | unknown function | unknown function | -1 | 48686 | 49003 |
| ANO57949.1 | KX223815_p20 | hypothetical protein | phrog_1401 | unknown function | unknown function | 1 | 26132 | 26554 |
| ANO57930.1 | KX223815_p1 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1236 | 1616 |
| ANO57993.1 | KX223815_p64 | single-stranded-DNA-specific exonuclease | phrog_2484 | RecJ-like ssDNA exonuclease | DNA, RNA and nucleotide metabolism | 1 | 56548 | 58290 |
| ANO58005.1 | KX223815_p76 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 62264 | 62635 |
| ANO58000.1 | KX223815_p71 | hypothetical protein | phrog_23702 | unknown function | unknown function | 1 | 60460 | 60714 |
| ANO57957.1 | KX223815_p28 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 35306 | 35950 |
| ANO57984.1 | KX223815_p55 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 49945 | 50556 |
| ANO57932.1 | KX223815_p3 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 2335 | 2595 |
| ANO58002.1 | KX223815_p73 | DNA binding protein | phrog_715 | MazG-like pyrophosphatase | other | 1 | 61127 | 61435 |
| ANO57994.1 | KX223815_p65 | hypothetical protein | phrog_19051 | unknown function | unknown function | 1 | 58495 | 58815 |
| ANO57998.1 | KX223815_p69 | hypothetical protein | phrog_17195 | unknown function | unknown function | 1 | 59703 | 59945 |
| ANO57971.1 | KX223815_p42 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42432 | 42755 |
| ANO57982.1 | KX223815_p53 | hypothetical protein | phrog_15790 | unknown function | unknown function | -1 | 49442 | 49684 |
| ANO58001.1 | KX223815_p72 | hypothetical protein | phrog_6670 | unknown function | unknown function | 1 | 60732 | 61127 |
| ANO58003.1 | KX223815_p74 | hypothetical protein | phrog_30787 | unknown function | unknown function | 1 | 61438 | 61719 |
| ANO57976.1 | KX223815_p47 | membrane protein | phrog_1880 | PnuC-like nicotinamide mononucleotide transport | moron, auxiliary metabolic gene and host takeover | -1 | 44372 | 45109 |
| ANO57996.1 | KX223815_p67 | hypothetical protein | phrog_4915 | unknown function | unknown function | 1 | 59005 | 59385 |
| ANO57952.1 | KX223815_p23 | hypothetical protein | phrog_1009 | unknown function | unknown function | 1 | 29165 | 29494 |
| ANO57943.1 | KX223815_p14 | hypothetical protein | phrog_1346 | tail protein | tail | 1 | 11849 | 12247 |
| ANO57989.1 | KX223815_p60 | hypothetical protein | phrog_16438 | unknown function | unknown function | 1 | 53161 | 53361 |
| ANO57969.1 | KX223815_p40 | hypothetical protein | phrog_2316 | unknown function | unknown function | -1 | 41465 | 42079 |
| ANO57963.1 | KX223815_p34 | extracellular transglycosylase | phrog_4602 | transglycosylase | other | -1 | 38295 | 39023 |
| ANO57985.1 | KX223815_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50678 | 50794 |
| ANO57978.1 | KX223815_p49 | ATP/GTP-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 46393 | 47436 |
| ANO57955.1 | KX223815_p26 | hypothetical protein | phrog_13351 | unknown function | unknown function | 1 | 31138 | 31386 |
| ANO57950.1 | KX223815_p21 | hypothetical protein | phrog_20633 | tail protein | tail | 1 | 26571 | 27683 |
| ANO57977.1 | KX223815_p48 | DNA polymerase | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 45154 | 46386 |
| ANO57975.1 | KX223815_p46 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 43771 | 44286 |
| ANO57948.1 | KX223815_p19 | hypothetical protein | phrog_28564 | unknown function | unknown function | 1 | 25872 | 26114 |
| ANO57958.1 | KX223815_p29 | hypothetical protein | phrog_15801 | unknown function | unknown function | -1 | 36054 | 36383 |
| ANO57990.1 | KX223815_p61 | hypothetical protein | phrog_4680 | unknown function | unknown function | 1 | 53446 | 53919 |
| ANO57968.1 | KX223815_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41279 | 41413 |
| ANO57986.1 | KX223815_p57 | hypothetical protein | phrog_15734 | unknown function | unknown function | 1 | 51673 | 51957 |
| ANO57965.1 | KX223815_p36 | hypothetical protein | phrog_5083 | unknown function | unknown function | -1 | 40006 | 40539 |
| ANO57981.1 | KX223815_p52 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 49006 | 49440 |
| ANO57946.1 | KX223815_p17 | baseplate protein tal-like protein | phrog_4798 | tail protein | tail | 1 | 20063 | 22441 |
| ANO57936.1 | KX223815_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7619 | 8908 |
| ANO57972.1 | KX223815_p43 | hypothetical protein | phrog_20638 | unknown function | unknown function | -1 | 42745 | 42900 |
| ANO58015.1 | KX223815_p86 | thymidine kinase | phrog_592 | thymidine kinase | other | 1 | 66060 | 66719 |
| ANO57966.1 | KX223815_p37 | hypothetical protein | phrog_14545 | unknown function | unknown function | -1 | 40532 | 40861 |
| ANO58010.1 | KX223815_p81 | hypothetical protein | phrog_4182 | unknown function | unknown function | 1 | 64260 | 64766 |
| ANO57941.1 | KX223815_p12 | tail protein | phrog_1217 | tail protein | tail | 1 | 10705 | 11082 |
| ANO57988.1 | KX223815_p59 | deoxynucleoside kinase | phrog_761 | thymidylate kinase | other | 1 | 52454 | 53161 |
| ANO57933.1 | KX223815_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 3223 | 4935 |
| ANO57939.1 | KX223815_p10 | head-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 9840 | 10259 |
| ANO57934.1 | KX223815_p5 | hk97 family portal protein | phrog_12 | portal protein | head and packaging | 1 | 5047 | 6405 |
| ANO57959.1 | KX223815_p30 | hypothetical protein | phrog_14203 | unknown function | unknown function | -1 | 36364 | 36672 |
| ANO58006.1 | KX223815_p77 | hypothetical protein | phrog_13264 | unknown function | unknown function | 1 | 62638 | 62916 |
| ANO57960.1 | KX223815_p31 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36672 | 37298 |
| ANO57997.1 | KX223815_p68 | hypothetical protein | phrog_19276 | unknown function | unknown function | 1 | 59378 | 59710 |
| ANO58008.1 | KX223815_p79 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 63409 | 63816 |
| ANO57953.1 | KX223815_p24 | hypothetical protein | phrog_25772 | unknown function | unknown function | 1 | 29491 | 30087 |
| ANO57992.1 | KX223815_p63 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 55514 | 56551 |
| ANO57964.1 | KX223815_p35 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 39108 | 39929 |
| ANO57962.1 | KX223815_p33 | hypothetical protein | phrog_20950 | unknown function | unknown function | -1 | 37850 | 38206 |
| ANO57995.1 | KX223815_p66 | hypothetical protein | phrog_36813 | unknown function | unknown function | 1 | 58819 | 58992 |
| ANO57979.1 | KX223815_p50 | hypothetical protein | phrog_2367 | unknown function | unknown function | -1 | 47496 | 48479 |