| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX379664 |
Definition |
Lactococcus phage 10W18, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
32393 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
34.94 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANY29009.1 | KX379664_p53 | hypothetical protein | phrog_7549 | unknown function | unknown function | -1 | 29351 | 29596 |
| ANY28993.1 | KX379664_p37 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 22277 | 23158 |
| ANY28957.1 | KX379664_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 260 | 784 |
| ANY28959.1 | KX379664_p3 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1215 | 2837 |
| ANY28966.1 | KX379664_p10 | HNH endonuclease | phrog_24477 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6546 | 6659 |
| ANY28964.1 | KX379664_p8 | structural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5972 | 6235 |
| ANY28974.1 | KX379664_p18 | Dit protein | phrog_1424 | tail protein | tail | 1 | 13269 | 14729 |
| ANY29001.1 | KX379664_p45 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25973 | 26332 |
| ANY29012.1 | KX379664_p56 | middle expressed protein 1 | phrog_5027 | unknown function | unknown function | 1 | 30826 | 31053 |
| ANY28973.1 | KX379664_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10519 | 13269 |
| ANY28980.1 | KX379664_p24 | lytic transglycosylase | phrog_3874 | transglycosylase | other | -1 | 18111 | 18554 |
| ANY28960.1 | KX379664_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2827 | 3111 |
| ANY28961.1 | KX379664_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3124 | 4260 |
| ANY28999.1 | KX379664_p43 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 25236 | 25745 |
| ANY29014.1 | KX379664_p58 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31186 | 31668 |
| ANY28987.1 | KX379664_p31 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20499 | 20756 |
| ANY28963.1 | KX379664_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4770 | 5951 |
| ANY28994.1 | KX379664_p38 | site-specific DNA methylase | phrog_56 | DNA methyltransferase | other | -1 | 23176 | 24123 |
| ANY28985.1 | KX379664_p29 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19910 | 20074 |
| ANY28972.1 | KX379664_p16 | structural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10007 | 10519 |
| ANY29004.1 | KX379664_p48 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 27209 | 27475 |
| ANY28984.1 | KX379664_p28 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19563 | 19910 |
| ANY28970.1 | KX379664_p14 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 9026 | 9688 |
| ANY28983.1 | KX379664_p27 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 19121 | 19390 |
| ANY28968.1 | KX379664_p12 | structural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6978 | 7343 |
| ANY29015.1 | KX379664_p59 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 31665 | 31832 |
| ANY28991.1 | KX379664_p35 | SaV protein | phrog_1225 | unknown function | unknown function | -1 | 21795 | 22100 |
| ANY28989.1 | KX379664_p33 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 21082 | 21279 |
| ANY29010.1 | KX379664_p54 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 30111 | 30239 |
| ANY28971.1 | KX379664_p15 | structural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9712 | 9987 |
| ANY28969.1 | KX379664_p13 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 7400 | 9001 |
| ANY28976.1 | KX379664_p20 | structural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 15846 | 16139 |
| ANY28962.1 | KX379664_p6 | head protease | phrog_80 | head maturation protease | head and packaging | 1 | 4241 | 4777 |
| ANY28967.1 | KX379664_p11 | structural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6649 | 6987 |
| ANY29006.1 | KX379664_p50 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 27721 | 28104 |
| ANY28995.1 | KX379664_p39 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 24116 | 24364 |
| ANY28977.1 | KX379664_p21 | receptor-binding protein | phrog_6465 | tail protein | tail | 1 | 16129 | 16938 |
| ANY28988.1 | KX379664_p32 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 20820 | 21008 |
| ANY29007.1 | KX379664_p51 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 28161 | 28418 |
| ANY28978.1 | KX379664_p22 | holin | phrog_1379 | unknown function | unknown function | 1 | 16952 | 17305 |
| ANY28958.1 | KX379664_p2 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 781 | 1203 |
| ANY29002.1 | KX379664_p46 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 26336 | 26902 |
| ANY28990.1 | KX379664_p34 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 21359 | 21793 |
| ANY29008.1 | KX379664_p52 | DNA polymerase subunit | phrog_1284 | unknown function | unknown function | -1 | 28411 | 29307 |
| ANY29000.1 | KX379664_p44 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 25742 | 25957 |
| ANY28981.1 | KX379664_p25 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 18566 | 18907 |
| ANY28997.1 | KX379664_p41 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 24646 | 24960 |
| ANY28979.1 | KX379664_p23 | lysin | phrog_670 | endolysin | lysis | 1 | 17302 | 18003 |
| ANY29011.1 | KX379664_p55 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 30607 | 30795 |
| ANY28998.1 | KX379664_p42 | hypothetical protein | phrog_24481 | unknown function | unknown function | -1 | 25050 | 25235 |
| ANY29013.1 | KX379664_p57 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 31058 | 31189 |
| ANY28986.1 | KX379664_p30 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 20264 | 20455 |
| ANY29005.1 | KX379664_p49 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 27432 | 27719 |
| ANY29003.1 | KX379664_p47 | HNH endonuclease | phrog_5462 | unknown function | unknown function | -1 | 26899 | 27222 |
| ANY28982.1 | KX379664_p26 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 18852 | 19100 |
| ANY28965.1 | KX379664_p9 | structural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6235 | 6549 |
| ANY28992.1 | KX379664_p36 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 22100 | 22219 |
| ANY28975.1 | KX379664_p19 | Tal protein | phrog_1432 | tail associated lysin | tail | 1 | 14729 | 15856 |
| ANY28996.1 | KX379664_p40 | hypothetical protein | phrog_10825 | unknown function | unknown function | -1 | 24364 | 24609 |