Genomic map of Lactococcus phage 4R15L (KX379667)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX379667
Definition
Lactococcus phage 4R15L, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30782
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
34.43
Number of singletons
0
Number of paralogs
5

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANY28867.1 KX379667_p20 receptor-binding protein 1 phrog_22544 unknown function unknown function 1 14768 15898
ANY28850.1 KX379667_p3 large terminase phrog_9 terminase large subunit head and packaging 1 1337 2632
ANY28869.1 KX379667_p22 holin phrog_1379 unknown function unknown function 1 16714 17067
ANY28898.1 KX379667_p51 hypothetical protein phrog_5487 unknown function unknown function -1 27365 27535
ANY28849.1 KX379667_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 753 1214
ANY28889.1 KX379667_p42 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23472 23831
ANY28881.1 KX379667_p34 hypothetical protein phrog_1225 unknown function unknown function -1 21065 21370
ANY28893.1 KX379667_p46 hypothetical protein phrog_1632 unknown function unknown function -1 25175 25465
ANY28888.1 KX379667_p41 hypothetical protein phrog_1295 unknown function unknown function -1 23244 23459
ANY28873.1 KX379667_p26 hypothetical protein phrog_1430 unknown function unknown function -1 18910 19179
ANY28855.1 KX379667_p8 structural protein 1 phrog_1428 head-tail connector protein connector 1 5767 6030
ANY28892.1 KX379667_p45 hypothetical protein phrog_1449 unknown function unknown function -1 24955 25221
ANY28895.1 KX379667_p48 hypothetical protein phrog_3604 unknown function unknown function -1 25748 25930
ANY28887.1 KX379667_p40 hypothetical protein phrog_1317 unknown function unknown function -1 22735 23247
ANY28882.1 KX379667_p35 hypothetical protein phrog_1508 unknown function unknown function -1 21370 21489
ANY28894.1 KX379667_p47 hypothetical protein phrog_1405 unknown function unknown function -1 25525 25785
ANY28877.1 KX379667_p30 hypothetical protein phrog_1820 unknown function unknown function -1 19866 20042
ANY28852.1 KX379667_p5 portal protein phrog_12 portal protein head and packaging 1 2919 4055
ANY28866.1 KX379667_p19 structural protein 7 phrog_1434 unknown function unknown function 1 14491 14766
ANY28875.1 KX379667_p28 hypothetical protein phrog_1415 unknown function unknown function -1 19352 19699
ANY28859.1 KX379667_p12 major tail protein phrog_1433 major tail protein tail 1 7051 7956
ANY28876.1 KX379667_p29 hypothetical protein phrog_1441 unknown function unknown function -1 19699 19866
ANY28874.1 KX379667_p27 hypothetical protein phrog_3389 unknown function unknown function -1 19176 19355
ANY28896.1 KX379667_p49 DNA polymerase subunit phrog_1284 unknown function unknown function -1 25923 26873
ANY28900.1 KX379667_p53 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 28417 28908
ANY28899.1 KX379667_p52 hypothetical protein phrog_2413 unknown function unknown function -1 28061 28180
ANY28891.1 KX379667_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24468 24968
ANY28862.1 KX379667_p15 structural protein 6 phrog_1421 virion structural protein head and packaging 1 8954 9466
ANY28884.1 KX379667_p37 hypothetical protein phrog_4546 unknown function unknown function -1 21790 21900
ANY28897.1 KX379667_p50 hypothetical protein phrog_2541 unknown function unknown function -1 26866 27087
ANY28860.1 KX379667_p13 tail fiber extension protein phrog_5983 tail protein tail 1 7958 8638
ANY28864.1 KX379667_p17 Dit protein phrog_1424 tail protein tail 1 12456 13388
ANY28903.1 KX379667_p56 holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29308 29790
ANY28871.1 KX379667_p24 lytic transglycosylase phrog_3874 transglycosylase other -1 17851 18420
ANY28870.1 KX379667_p23 lysin phrog_670 endolysin lysis 1 17064 17771
ANY28885.1 KX379667_p38 hypothetical protein phrog_1919 unknown function unknown function -1 21934 22236
ANY28863.1 KX379667_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 9466 12456
ANY28861.1 KX379667_p14 structural protein 5 phrog_1420 virion structural protein head and packaging 1 8659 8934
ANY28904.1 KX379667_p57 middle expressed protein 4 phrog_1652 unknown function unknown function 1 29787 29954
ANY28883.1 KX379667_p36 hypothetical protein phrog_1825 DNA methyltransferase other -1 21547 21789
ANY28890.1 KX379667_p43 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23836 24483
ANY28868.1 KX379667_p21 receptor-binding protein 2 phrog_1630 receptor binding tail protein tail 1 15898 16692
ANY28851.1 KX379667_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2622 2906
ANY28858.1 KX379667_p11 structural protein 4 phrog_1440 virion structural protein head and packaging 1 6673 7038
ANY28856.1 KX379667_p9 structural protein 2 phrog_1429 virion structural protein head and packaging 1 6030 6344
ANY28854.1 KX379667_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4565 5746
ANY28901.1 KX379667_p54 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29047 29175
ANY28879.1 KX379667_p32 hypothetical protein phrog_1509 unknown function unknown function -1 20277 20528
ANY28880.1 KX379667_p33 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20599 21093
ANY28853.1 KX379667_p6 head protease phrog_80 head maturation protease head and packaging 1 4036 4572
ANY28902.1 KX379667_p55 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29180 29311
ANY28857.1 KX379667_p10 structural protein 3 phrog_1484 virion structural protein head and packaging 1 6341 6682
ANY28865.1 KX379667_p18 Tal protein phrog_1432 tail associated lysin tail 1 13390 14490
ANY28886.1 KX379667_p39 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22233 22655
ANY28848.1 KX379667_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 232 756
ANY28872.1 KX379667_p25 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 18426 18779
ANY28878.1 KX379667_p31 hypothetical protein phrog_2530 unknown function unknown function -1 20044 20235