| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX379667 |
Definition |
Lactococcus phage 4R15L, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
30782 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
34.43 |
Number of singletons |
0 |
Number of paralogs |
5 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANY28867.1 | KX379667_p20 | receptor-binding protein 1 | phrog_22544 | unknown function | unknown function | 1 | 14768 | 15898 |
| ANY28850.1 | KX379667_p3 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1337 | 2632 |
| ANY28869.1 | KX379667_p22 | holin | phrog_1379 | unknown function | unknown function | 1 | 16714 | 17067 |
| ANY28898.1 | KX379667_p51 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 27365 | 27535 |
| ANY28849.1 | KX379667_p2 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 753 | 1214 |
| ANY28889.1 | KX379667_p42 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23472 | 23831 |
| ANY28881.1 | KX379667_p34 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21065 | 21370 |
| ANY28893.1 | KX379667_p46 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25175 | 25465 |
| ANY28888.1 | KX379667_p41 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23244 | 23459 |
| ANY28873.1 | KX379667_p26 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18910 | 19179 |
| ANY28855.1 | KX379667_p8 | structural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5767 | 6030 |
| ANY28892.1 | KX379667_p45 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24955 | 25221 |
| ANY28895.1 | KX379667_p48 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 25748 | 25930 |
| ANY28887.1 | KX379667_p40 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22735 | 23247 |
| ANY28882.1 | KX379667_p35 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 21370 | 21489 |
| ANY28894.1 | KX379667_p47 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25525 | 25785 |
| ANY28877.1 | KX379667_p30 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19866 | 20042 |
| ANY28852.1 | KX379667_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2919 | 4055 |
| ANY28866.1 | KX379667_p19 | structural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 14491 | 14766 |
| ANY28875.1 | KX379667_p28 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19352 | 19699 |
| ANY28859.1 | KX379667_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 7051 | 7956 |
| ANY28876.1 | KX379667_p29 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19699 | 19866 |
| ANY28874.1 | KX379667_p27 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 19176 | 19355 |
| ANY28896.1 | KX379667_p49 | DNA polymerase subunit | phrog_1284 | unknown function | unknown function | -1 | 25923 | 26873 |
| ANY28900.1 | KX379667_p53 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28417 | 28908 |
| ANY28899.1 | KX379667_p52 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 28061 | 28180 |
| ANY28891.1 | KX379667_p44 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24468 | 24968 |
| ANY28862.1 | KX379667_p15 | structural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 8954 | 9466 |
| ANY28884.1 | KX379667_p37 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 21790 | 21900 |
| ANY28897.1 | KX379667_p50 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 26866 | 27087 |
| ANY28860.1 | KX379667_p13 | tail fiber extension protein | phrog_5983 | tail protein | tail | 1 | 7958 | 8638 |
| ANY28864.1 | KX379667_p17 | Dit protein | phrog_1424 | tail protein | tail | 1 | 12456 | 13388 |
| ANY28903.1 | KX379667_p56 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29308 | 29790 |
| ANY28871.1 | KX379667_p24 | lytic transglycosylase | phrog_3874 | transglycosylase | other | -1 | 17851 | 18420 |
| ANY28870.1 | KX379667_p23 | lysin | phrog_670 | endolysin | lysis | 1 | 17064 | 17771 |
| ANY28885.1 | KX379667_p38 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21934 | 22236 |
| ANY28863.1 | KX379667_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 9466 | 12456 |
| ANY28861.1 | KX379667_p14 | structural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 8659 | 8934 |
| ANY28904.1 | KX379667_p57 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 29787 | 29954 |
| ANY28883.1 | KX379667_p36 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21547 | 21789 |
| ANY28890.1 | KX379667_p43 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23836 | 24483 |
| ANY28868.1 | KX379667_p21 | receptor-binding protein 2 | phrog_1630 | receptor binding tail protein | tail | 1 | 15898 | 16692 |
| ANY28851.1 | KX379667_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2622 | 2906 |
| ANY28858.1 | KX379667_p11 | structural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6673 | 7038 |
| ANY28856.1 | KX379667_p9 | structural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6030 | 6344 |
| ANY28854.1 | KX379667_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4565 | 5746 |
| ANY28901.1 | KX379667_p54 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 29047 | 29175 |
| ANY28879.1 | KX379667_p32 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20277 | 20528 |
| ANY28880.1 | KX379667_p33 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 20599 | 21093 |
| ANY28853.1 | KX379667_p6 | head protease | phrog_80 | head maturation protease | head and packaging | 1 | 4036 | 4572 |
| ANY28902.1 | KX379667_p55 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 29180 | 29311 |
| ANY28857.1 | KX379667_p10 | structural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6341 | 6682 |
| ANY28865.1 | KX379667_p18 | Tal protein | phrog_1432 | tail associated lysin | tail | 1 | 13390 | 14490 |
| ANY28886.1 | KX379667_p39 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22233 | 22655 |
| ANY28848.1 | KX379667_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 232 | 756 |
| ANY28872.1 | KX379667_p25 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 18426 | 18779 |
| ANY28878.1 | KX379667_p31 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 20044 | 20235 |