Genomic map of Lactococcus phage 4R16L2 (KX379668)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX379668
Definition
Lactococcus phage 4R16L2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30913
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
34.57
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANY28811.1 KX379668_p22 holin phrog_1379 unknown function unknown function 1 16959 17312
ANY28820.1 KX379668_p31 hypothetical protein phrog_2530 unknown function unknown function -1 20356 20547
ANY28798.1 KX379668_p9 structural protein 2 phrog_1429 virion structural protein head and packaging 1 6274 6588
ANY28816.1 KX379668_p27 hypothetical protein phrog_1430 unknown function unknown function -1 19222 19491
ANY28795.1 KX379668_p6 head protease phrog_80 head maturation protease head and packaging 1 4280 4816
ANY28799.1 KX379668_p10 structural protein 3 phrog_1484 virion structural protein head and packaging 1 6585 6926
ANY28793.1 KX379668_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2866 3150
ANY28802.1 KX379668_p13 tail fiber protein phrog_5983 tail protein tail 1 8202 8882
ANY28828.1 KX379668_p39 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22545 22967
ANY28841.1 KX379668_p52 hypothetical protein phrog_2413 unknown function unknown function -1 28314 28433
ANY28831.1 KX379668_p42 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23784 24143
ANY28797.1 KX379668_p8 structural protein 1 phrog_1428 head-tail connector protein connector 1 6011 6274
ANY28809.1 KX379668_p20 receptor-binding protein 1 phrog_22544 unknown function unknown function 1 15012 16142
ANY28846.1 KX379668_p57 middle expressed protein 4 phrog_1652 unknown function unknown function 1 29918 30085
ANY28812.1 KX379668_p23 lysin phrog_670 endolysin lysis 1 17309 18016
ANY28837.1 KX379668_p48 hypothetical protein phrog_3604 unknown function unknown function -1 26060 26242
ANY28810.1 KX379668_p21 receptor-binding protein 2 phrog_1630 receptor binding tail protein tail 1 16143 16937
ANY28832.1 KX379668_p43 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24148 24795
ANY28839.1 KX379668_p50 hypothetical protein phrog_2541 unknown function unknown function -1 27178 27399
ANY28791.1 KX379668_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 791 1252
ANY28836.1 KX379668_p47 hypothetical protein phrog_1405 unknown function unknown function -1 25837 26097
ANY28804.1 KX379668_p15 structural protein 6 phrog_1421 virion structural protein head and packaging 1 9198 9710
ANY28834.1 KX379668_p45 hypothetical protein phrog_1449 unknown function unknown function -1 25267 25533
ANY28819.1 KX379668_p30 hypothetical protein phrog_1441 unknown function unknown function -1 20011 20178
ANY28829.1 KX379668_p40 hypothetical protein phrog_1317 unknown function unknown function -1 23047 23559
ANY28796.1 KX379668_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4809 5990
ANY28827.1 KX379668_p38 hypothetical protein phrog_1919 unknown function unknown function -1 22246 22548
ANY28808.1 KX379668_p19 structural protein 7 phrog_1434 unknown function unknown function 1 14735 15010
ANY28835.1 KX379668_p46 hypothetical protein phrog_1632 unknown function unknown function -1 25487 25777
ANY28801.1 KX379668_p12 major tail protein phrog_1433 major tail protein tail 1 7295 8200
ANY28845.1 KX379668_p56 holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29439 29921
ANY28814.1 KX379668_p25 hypothetical protein phrog_35117 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 18737 18889
ANY28800.1 KX379668_p11 structural protein 4 phrog_1440 virion structural protein head and packaging 1 6917 7282
ANY28838.1 KX379668_p49 DNA polymerase subunit phrog_1284 unknown function unknown function -1 26235 27185
ANY28805.1 KX379668_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 9710 12700
ANY28840.1 KX379668_p51 hypothetical protein phrog_5487 unknown function unknown function -1 27647 27817
ANY28830.1 KX379668_p41 hypothetical protein phrog_1295 unknown function unknown function -1 23556 23771
ANY28818.1 KX379668_p29 hypothetical protein phrog_1415 unknown function unknown function -1 19664 20011
ANY28842.1 KX379668_p53 hypothetical protein phrog_1656 unknown function unknown function -1 28859 29047
ANY28790.1 KX379668_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 270 794
ANY28825.1 KX379668_p36 hypothetical protein phrog_1825 DNA methyltransferase other -1 21859 22101
ANY28833.1 KX379668_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24780 25280
ANY28807.1 KX379668_p18 Tal protein phrog_1432 tail associated lysin tail 1 13634 14734
ANY28803.1 KX379668_p14 structural protein 5 phrog_1420 virion structural protein head and packaging 1 8903 9178
ANY28843.1 KX379668_p54 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29178 29306
ANY28826.1 KX379668_p37 hypothetical protein phrog_4546 unknown function unknown function -1 22102 22212
ANY28847.1 KX379668_p58 middle expressed protein 5 phrog_6252 unknown function unknown function 1 30682 30810
ANY28815.1 KX379668_p26 HNH endonuclease phrog_30377 HNH endonuclease DNA, RNA and nucleotide metabolism -1 18843 19091
ANY28794.1 KX379668_p5 portal protein phrog_12 portal protein head and packaging 1 3163 4299
ANY28821.1 KX379668_p32 hypothetical protein phrog_1509 unknown function unknown function -1 20589 20840
ANY28813.1 KX379668_p24 lytic transglycosylase phrog_3874 transglycosylase other -1 18108 18731
ANY28792.1 KX379668_p3 large terminase phrog_9 terminase large subunit head and packaging 1 1254 2876
ANY28823.1 KX379668_p34 hypothetical protein phrog_1225 unknown function unknown function -1 21377 21682
ANY28822.1 KX379668_p33 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20911 21405
ANY28806.1 KX379668_p17 Dit protein phrog_1424 tail protein tail 1 12700 13632
ANY28817.1 KX379668_p28 hypothetical protein phrog_3389 unknown function unknown function -1 19488 19667
ANY28824.1 KX379668_p35 hypothetical protein phrog_1508 unknown function unknown function -1 21682 21801
ANY28844.1 KX379668_p55 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29311 29442