Genomic map of Lactococcus phage 10W22S (KX379669)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX379669
Definition
Lactococcus phage 10W22S, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30934
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
34.93
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANY28749.1 KX379669_p19 structural protein 7 phrog_1434 unknown function unknown function 1 14176 14469
ANY28752.1 KX379669_p22 lysin phrog_670 endolysin lysis 1 15632 16333
ANY28738.1 KX379669_p8 structural protein 1 phrog_1428 head-tail connector protein connector 1 5972 6235
ANY28785.1 KX379669_p55 hypothetical protein phrog_1656 unknown function unknown function -1 29147 29335
ANY28761.1 KX379669_p31 hypothetical protein phrog_3365 unknown function unknown function -1 19149 19337
ANY28747.1 KX379669_p17 Dit protein phrog_1424 tail protein tail 1 11599 13059
ANY28774.1 KX379669_p44 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24302 24661
ANY28748.1 KX379669_p18 Tal protein phrog_1432 tail associated lysin tail 1 13059 14186
ANY28755.1 KX379669_p25 hypothetical protein phrog_5152 unknown function unknown function -1 17182 17430
ANY28743.1 KX379669_p13 major tail protein phrog_1433 major tail protein tail 1 7356 8018
ANY28733.1 KX379669_p3 large terminase phrog_9 terminase large subunit head and packaging 1 1215 2837
ANY28756.1 KX379669_p26 hypothetical protein phrog_1430 unknown function unknown function -1 17451 17720
ANY28745.1 KX379669_p15 structural protein 6 phrog_1421 virion structural protein head and packaging 1 8337 8849
ANY28754.1 KX379669_p24 hypothetical protein phrog_5087 unknown function unknown function -1 16896 17237
ANY28784.1 KX379669_p54 hypothetical protein phrog_2413 unknown function unknown function -1 28650 28778
ANY28771.1 KX379669_p41 hypothetical protein phrog_24481 unknown function unknown function -1 23379 23564
ANY28760.1 KX379669_p30 hypothetical protein phrog_1509 unknown function unknown function -1 18828 19085
ANY28762.1 KX379669_p32 hypothetical protein phrog_6037 unknown function unknown function -1 19411 19608
ANY28744.1 KX379669_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 8042 8317
ANY28763.1 KX379669_p33 hypothetical protein phrog_3530 unknown function unknown function -1 19688 20122
ANY28742.1 KX379669_p12 structural protein 4 phrog_1440 virion structural protein head and packaging 1 6978 7343
ANY28731.1 KX379669_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 260 784
ANY28740.1 KX379669_p10 HNH endonuclease phrog_24477 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6546 6659
ANY28780.1 KX379669_p50 hypothetical protein phrog_1405 unknown function unknown function -1 26490 26747
ANY28767.1 KX379669_p37 site-specific DNA methylase phrog_56 DNA methyltransferase other -1 21505 22452
ANY28781.1 KX379669_p51 DNA polymerase subunit phrog_1284 unknown function unknown function -1 26740 27690
ANY28783.1 KX379669_p53 hypothetical protein singleton unknown function unknown function -1 28043 28138
ANY28750.1 KX379669_p20 receptor-binding protein phrog_6465 tail protein tail 1 14459 15268
ANY28746.1 KX379669_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 8849 11599
ANY28766.1 KX379669_p36 methylase phrog_56 DNA methyltransferase other -1 20606 21487
ANY28751.1 KX379669_p21 holin phrog_1379 unknown function unknown function 1 15282 15635
ANY28765.1 KX379669_p35 hypothetical protein phrog_1508 unknown function unknown function -1 20429 20548
ANY28787.1 KX379669_p57 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29598 29729
ANY28786.1 KX379669_p56 middle expressed protein 1 phrog_5027 unknown function unknown function 1 29366 29593
ANY28773.1 KX379669_p43 hypothetical protein phrog_1295 unknown function unknown function -1 24071 24286
ANY28777.1 KX379669_p47 hypothetical protein phrog_1449 unknown function unknown function -1 25538 25804
ANY28735.1 KX379669_p5 portal protein phrog_12 portal protein head and packaging 1 3124 4260
ANY28769.1 KX379669_p39 hypothetical protein phrog_10825 unknown function unknown function -1 22693 22938
ANY28764.1 KX379669_p34 SaV protein phrog_1225 unknown function unknown function -1 20124 20429
ANY28772.1 KX379669_p42 hypothetical protein phrog_1317 unknown function unknown function -1 23565 24074
ANY28759.1 KX379669_p29 hypothetical protein phrog_2530 unknown function unknown function -1 18594 18785
ANY28776.1 KX379669_p46 HNH endonuclease phrog_5462 unknown function unknown function -1 25228 25551
ANY28775.1 KX379669_p45 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24665 25231
ANY28788.1 KX379669_p58 holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29726 30208
ANY28734.1 KX379669_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2827 3111
ANY28778.1 KX379669_p48 hypothetical protein phrog_1632 unknown function unknown function -1 25761 26048
ANY28789.1 KX379669_p59 middle expressed protein 4 phrog_1652 unknown function unknown function 1 30205 30372
ANY28732.1 KX379669_p2 DNA methylase phrog_111 DNA methyltransferase other 1 781 1203
ANY28770.1 KX379669_p40 hypothetical protein phrog_1919 unknown function unknown function -1 22975 23289
ANY28741.1 KX379669_p11 structural protein 3 phrog_1484 virion structural protein head and packaging 1 6649 6987
ANY28737.1 KX379669_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4770 5951
ANY28739.1 KX379669_p9 structural protein 2 phrog_1429 virion structural protein head and packaging 1 6235 6549
ANY28758.1 KX379669_p28 hypothetical protein phrog_1441 unknown function unknown function -1 18240 18404
ANY28736.1 KX379669_p6 head protease phrog_80 head maturation protease head and packaging 1 4241 4777
ANY28753.1 KX379669_p23 lytic transglycosylase phrog_3874 transglycosylase other -1 16441 16884
ANY28757.1 KX379669_p27 hypothetical protein phrog_1415 unknown function unknown function -1 17893 18240
ANY28779.1 KX379669_p49 hypothetical protein phrog_2228 unknown function unknown function -1 26050 26433
ANY28768.1 KX379669_p38 hypothetical protein phrog_1825 DNA methyltransferase other -1 22445 22693
ANY28782.1 KX379669_p52 hypothetical protein phrog_4505 unknown function unknown function -1 27748 27933