| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX379669 |
Definition |
Lactococcus phage 10W22S, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
30934 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
34.93 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANY28749.1 | KX379669_p19 | structural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 14176 | 14469 |
| ANY28752.1 | KX379669_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 15632 | 16333 |
| ANY28738.1 | KX379669_p8 | structural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5972 | 6235 |
| ANY28785.1 | KX379669_p55 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29147 | 29335 |
| ANY28761.1 | KX379669_p31 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 19149 | 19337 |
| ANY28747.1 | KX379669_p17 | Dit protein | phrog_1424 | tail protein | tail | 1 | 11599 | 13059 |
| ANY28774.1 | KX379669_p44 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24302 | 24661 |
| ANY28748.1 | KX379669_p18 | Tal protein | phrog_1432 | tail associated lysin | tail | 1 | 13059 | 14186 |
| ANY28755.1 | KX379669_p25 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 17182 | 17430 |
| ANY28743.1 | KX379669_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 7356 | 8018 |
| ANY28733.1 | KX379669_p3 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1215 | 2837 |
| ANY28756.1 | KX379669_p26 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17451 | 17720 |
| ANY28745.1 | KX379669_p15 | structural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 8337 | 8849 |
| ANY28754.1 | KX379669_p24 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 16896 | 17237 |
| ANY28784.1 | KX379669_p54 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 28650 | 28778 |
| ANY28771.1 | KX379669_p41 | hypothetical protein | phrog_24481 | unknown function | unknown function | -1 | 23379 | 23564 |
| ANY28760.1 | KX379669_p30 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 18828 | 19085 |
| ANY28762.1 | KX379669_p32 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 19411 | 19608 |
| ANY28744.1 | KX379669_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 8042 | 8317 |
| ANY28763.1 | KX379669_p33 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 19688 | 20122 |
| ANY28742.1 | KX379669_p12 | structural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6978 | 7343 |
| ANY28731.1 | KX379669_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 260 | 784 |
| ANY28740.1 | KX379669_p10 | HNH endonuclease | phrog_24477 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6546 | 6659 |
| ANY28780.1 | KX379669_p50 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 26490 | 26747 |
| ANY28767.1 | KX379669_p37 | site-specific DNA methylase | phrog_56 | DNA methyltransferase | other | -1 | 21505 | 22452 |
| ANY28781.1 | KX379669_p51 | DNA polymerase subunit | phrog_1284 | unknown function | unknown function | -1 | 26740 | 27690 |
| ANY28783.1 | KX379669_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28043 | 28138 |
| ANY28750.1 | KX379669_p20 | receptor-binding protein | phrog_6465 | tail protein | tail | 1 | 14459 | 15268 |
| ANY28746.1 | KX379669_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8849 | 11599 |
| ANY28766.1 | KX379669_p36 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 20606 | 21487 |
| ANY28751.1 | KX379669_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 15282 | 15635 |
| ANY28765.1 | KX379669_p35 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20429 | 20548 |
| ANY28787.1 | KX379669_p57 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 29598 | 29729 |
| ANY28786.1 | KX379669_p56 | middle expressed protein 1 | phrog_5027 | unknown function | unknown function | 1 | 29366 | 29593 |
| ANY28773.1 | KX379669_p43 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 24071 | 24286 |
| ANY28777.1 | KX379669_p47 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25538 | 25804 |
| ANY28735.1 | KX379669_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3124 | 4260 |
| ANY28769.1 | KX379669_p39 | hypothetical protein | phrog_10825 | unknown function | unknown function | -1 | 22693 | 22938 |
| ANY28764.1 | KX379669_p34 | SaV protein | phrog_1225 | unknown function | unknown function | -1 | 20124 | 20429 |
| ANY28772.1 | KX379669_p42 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23565 | 24074 |
| ANY28759.1 | KX379669_p29 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 18594 | 18785 |
| ANY28776.1 | KX379669_p46 | HNH endonuclease | phrog_5462 | unknown function | unknown function | -1 | 25228 | 25551 |
| ANY28775.1 | KX379669_p45 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24665 | 25231 |
| ANY28788.1 | KX379669_p58 | holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29726 | 30208 |
| ANY28734.1 | KX379669_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2827 | 3111 |
| ANY28778.1 | KX379669_p48 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25761 | 26048 |
| ANY28789.1 | KX379669_p59 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 30205 | 30372 |
| ANY28732.1 | KX379669_p2 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 781 | 1203 |
| ANY28770.1 | KX379669_p40 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22975 | 23289 |
| ANY28741.1 | KX379669_p11 | structural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6649 | 6987 |
| ANY28737.1 | KX379669_p7 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4770 | 5951 |
| ANY28739.1 | KX379669_p9 | structural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 6235 | 6549 |
| ANY28758.1 | KX379669_p28 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18240 | 18404 |
| ANY28736.1 | KX379669_p6 | head protease | phrog_80 | head maturation protease | head and packaging | 1 | 4241 | 4777 |
| ANY28753.1 | KX379669_p23 | lytic transglycosylase | phrog_3874 | transglycosylase | other | -1 | 16441 | 16884 |
| ANY28757.1 | KX379669_p27 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 17893 | 18240 |
| ANY28779.1 | KX379669_p49 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26050 | 26433 |
| ANY28768.1 | KX379669_p38 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 22445 | 22693 |
| ANY28782.1 | KX379669_p52 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 27748 | 27933 |