Genomic map of Lactococcus phage 19W07F (KX379670)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX379670
Definition
Lactococcus phage 19W07F, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30890
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
34.68
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANY28690.1 KX379670_p12 neck passage structure phrog_7918 neck passage structure protein connector 1 7427 10015
ANY28727.1 KX379670_p49 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29669 29797
ANY28726.1 KX379670_p48 hypothetical protein phrog_1656 unknown function unknown function -1 29363 29551
ANY28729.1 KX379670_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29930 30409
ANY28701.1 KX379670_p23 hypothetical protein phrog_1430 unknown function unknown function -1 18754 19020
ANY28688.1 KX379670_p10 structural protein 3 phrog_1484 virion structural protein head and packaging 1 6673 7014
ANY28699.1 KX379670_p21 holin phrog_1379 unknown function unknown function 1 17527 17880
ANY28714.1 KX379670_p36 hypothetical protein phrog_1317 unknown function unknown function -1 23838 24347
ANY28712.1 KX379670_p34 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23053 23475
ANY28724.1 KX379670_p46 hypothetical protein phrog_4505 unknown function unknown function -1 28196 28351
ANY28706.1 KX379670_p28 hypothetical protein phrog_1509 unknown function unknown function -1 20119 20370
ANY28681.1 KX379670_p3 large terminase phrog_9 terminase large subunit head and packaging 1 1342 2964
ANY28697.1 KX379670_p19 structural protein 7 phrog_1434 unknown function unknown function 1 16461 16754
ANY28693.1 KX379670_p15 structural protein 6 phrog_1421 virion structural protein head and packaging 1 11426 11938
ANY28696.1 KX379670_p18 Tal protein phrog_1432 tail associated lysin tail 1 15344 16471
ANY28710.1 KX379670_p32 methylase phrog_56 DNA methyltransferase other -1 21820 22698
ANY28709.1 KX379670_p31 hypothetical protein phrog_1071 DNA methyltransferase other -1 21102 21764
ANY28721.1 KX379670_p43 hypothetical protein phrog_2228 unknown function unknown function -1 26496 26882
ANY28716.1 KX379670_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24575 24934
ANY28694.1 KX379670_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11938 14448
ANY28715.1 KX379670_p37 hypothetical protein phrog_1295 unknown function unknown function -1 24344 24559
ANY28692.1 KX379670_p14 structural protein 5 phrog_1420 virion structural protein head and packaging 1 11131 11406
ANY28687.1 KX379670_p9 structural protein 2 phrog_1429 virion structural protein head and packaging 1 6362 6676
ANY28730.1 KX379670_p52 middle expressed protein 4 phrog_1652 unknown function unknown function 1 30410 30571
ANY28689.1 KX379670_p11 structural protein 4 phrog_1440 virion structural protein head and packaging 1 7005 7370
ANY28718.1 KX379670_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25502 26002
ANY28679.1 KX379670_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 358 882
ANY28725.1 KX379670_p47 hypothetical protein phrog_2413 unknown function unknown function -1 28865 28993
ANY28695.1 KX379670_p17 Dit protein phrog_1424 tail protein tail 1 14448 15344
ANY28686.1 KX379670_p8 structural protein 1 phrog_1428 head-tail connector protein connector 1 6099 6362
ANY28700.1 KX379670_p22 lysin phrog_670 endolysin lysis 1 17877 18653
ANY28691.1 KX379670_p13 major protein phrog_1433 major tail protein tail 1 10187 11092
ANY28684.1 KX379670_p6 head protease phrog_80 head maturation protease head and packaging 1 4368 4904
ANY28702.1 KX379670_p24 hypothetical protein phrog_3389 unknown function unknown function -1 19017 19196
ANY28683.1 KX379670_p5 portal protein phrog_12 portal protein head and packaging 1 3251 4387
ANY28711.1 KX379670_p33 hypothetical protein phrog_1919 unknown function unknown function -1 22742 23056
ANY28680.1 KX379670_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 879 1340
ANY28704.1 KX379670_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19537 19707
ANY28708.1 KX379670_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20977 21096
ANY28713.1 KX379670_p35 hypothetical protein phrog_4582 unknown function unknown function -1 23582 23755
ANY28698.1 KX379670_p20 receptor-binding protein phrog_1630 receptor binding tail protein tail 1 16744 17505
ANY28722.1 KX379670_p44 hypothetical protein phrog_1405 unknown function unknown function -1 26933 27196
ANY28705.1 KX379670_p27 hypothetical protein phrog_2530 unknown function unknown function -1 19885 20076
ANY28719.1 KX379670_p41 hypothetical protein phrog_1449 unknown function unknown function -1 25989 26255
ANY28720.1 KX379670_p42 hypothetical protein phrog_1632 unknown function unknown function -1 26212 26499
ANY28703.1 KX379670_p25 hypothetical protein phrog_1415 unknown function unknown function -1 19193 19540
ANY28728.1 KX379670_p50 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29802 29933
ANY28717.1 KX379670_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24939 25517
ANY28685.1 KX379670_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4897 6078
ANY28723.1 KX379670_p45 DNA polymerase subunit phrog_1284 unknown function unknown function -1 27189 28139
ANY28682.1 KX379670_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2954 3238
ANY28707.1 KX379670_p29 hypothetical protein phrog_1225 unknown function unknown function -1 20669 20977