Genomic map of Lactococcus phage 13W11L (KX379671)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX379671
Definition
Lactococcus phage 13W11L, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29952
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.7
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ANY28640.1 KX379671_p15 structural protein 6 phrog_1421 virion structural protein head and packaging 1 10970 11482
ANY28650.1 KX379671_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18737 19084
ANY28627.1 KX379671_p2 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 875 1336
ANY28661.1 KX379671_p36 hypothetical protein phrog_4546 unknown function unknown function -1 23019 23129
ANY28633.1 KX379671_p8 structural protein 1 phrog_1428 head-tail connector protein connector 1 6095 6358
ANY28638.1 KX379671_p13 major tail protein phrog_1433 major tail protein tail 1 9731 10636
ANY28632.1 KX379671_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 4893 6074
ANY28626.1 KX379671_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 354 878
ANY28656.1 KX379671_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20520 20639
ANY28654.1 KX379671_p29 hypothetical protein phrog_3365 unknown function unknown function -1 19985 20137
ANY28644.1 KX379671_p19 structural protein 7 phrog_1434 unknown function unknown function 1 16005 16298
ANY28635.1 KX379671_p10 structural protein 3 phrog_1484 virion structural protein head and packaging 1 6669 7010
ANY28660.1 KX379671_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22596 23018
ANY28647.1 KX379671_p22 lysin phrog_670 endolysin lysis 1 17421 18197
ANY28663.1 KX379671_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23382 23891
ANY28648.1 KX379671_p23 hypothetical protein phrog_1430 unknown function unknown function -1 18298 18564
ANY28672.1 KX379671_p47 hypothetical protein phrog_4505 unknown function unknown function -1 27241 27396
ANY28673.1 KX379671_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27910 28038
ANY28628.1 KX379671_p3 large terminase phrog_9 terminase large subunit head and packaging 1 1338 2960
ANY28639.1 KX379671_p14 structural protein 5 phrog_1420 virion structural protein head and packaging 1 10675 10950
ANY28634.1 KX379671_p9 structural protein 2 phrog_1429 virion structural protein head and packaging 1 6358 6672
ANY28667.1 KX379671_p42 hypothetical protein phrog_1449 unknown function unknown function -1 25033 25299
ANY28630.1 KX379671_p5 portal protein phrog_12 portal protein head and packaging 1 3247 4383
ANY28666.1 KX379671_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24480 25046
ANY28631.1 KX379671_p6 head protease phrog_80 head maturation protease head and packaging 1 4364 4900
ANY28665.1 KX379671_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24116 24475
ANY28637.1 KX379671_p12 neck passage structure phrog_27126 neck protein connector 1 7423 9609
ANY28675.1 KX379671_p50 middle expressed protein 1 phrog_1952 unknown function unknown function 1 28727 28855
ANY28636.1 KX379671_p11 structural protein 4 phrog_1440 virion structural protein head and packaging 1 7001 7366
ANY28655.1 KX379671_p30 SaV protein phrog_1225 unknown function unknown function -1 20212 20520
ANY28629.1 KX379671_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2950 3234
ANY28677.1 KX379671_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28988 29467
ANY28657.1 KX379671_p32 hypothetical protein phrog_1071 DNA methyltransferase other -1 20645 21307
ANY28652.1 KX379671_p27 hypothetical protein phrog_2530 unknown function unknown function -1 19429 19620
ANY28653.1 KX379671_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19663 19914
ANY28670.1 KX379671_p45 hypothetical protein phrog_1405 unknown function unknown function -1 25977 26240
ANY28678.1 KX379671_p53 middle expressed protein 4 phrog_1652 unknown function unknown function 1 29468 29629
ANY28651.1 KX379671_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19081 19251
ANY28649.1 KX379671_p24 hypothetical protein phrog_3389 unknown function unknown function -1 18561 18740
ANY28674.1 KX379671_p49 hypothetical protein phrog_1656 unknown function unknown function -1 28408 28596
ANY28642.1 KX379671_p17 Dit protein phrog_1424 tail protein tail 1 13992 14888
ANY28659.1 KX379671_p34 hypothetical protein phrog_1919 unknown function unknown function -1 22285 22599
ANY28646.1 KX379671_p21 holin phrog_1379 unknown function unknown function 1 17071 17424
ANY28669.1 KX379671_p44 hypothetical protein phrog_2228 unknown function unknown function -1 25540 25926
ANY28641.1 KX379671_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11482 13992
ANY28676.1 KX379671_p51 middle expressed protein 2 phrog_1436 unknown function unknown function 1 28860 28991
ANY28662.1 KX379671_p37 hypothetical protein phrog_4582 unknown function unknown function -1 23126 23299
ANY28645.1 KX379671_p20 receptor-binding protein phrog_1630 receptor binding tail protein tail 1 16288 17049
ANY28668.1 KX379671_p43 hypothetical protein phrog_1632 unknown function unknown function -1 25253 25543
ANY28643.1 KX379671_p18 Tal protein phrog_1432 tail associated lysin tail 1 14888 16015
ANY28671.1 KX379671_p46 DNA polymerase subunit phrog_1284 unknown function unknown function -1 26233 27183
ANY28664.1 KX379671_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23888 24103
ANY28658.1 KX379671_p33 methylase phrog_56 DNA methyltransferase other -1 21363 22241