| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX456212 |
Definition |
Lactococcus phage 86501, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
33035 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
35.49 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANS02670.1 | KX456212_p25 | transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | 1 | 12524 | 13060 |
| ANS02647.1 | KX456212_p2 | Sie protein | phrog_8545 | superinfection exclusion Sie-like | moron, auxiliary metabolic gene and host takeover | -1 | 1246 | 1767 |
| ANS02697.1 | KX456212_p52 | hypothetical protein | phrog_11039 | unknown function | unknown function | 1 | 32561 | 32815 |
| ANS02687.1 | KX456212_p42 | hypothetical protein | phrog_1633 | unknown function | unknown function | 1 | 21764 | 22138 |
| ANS02667.1 | KX456212_p22 | transcription factor | phrog_22202 | transcription factor | transcription regulation | 1 | 11609 | 11875 |
| ANS02692.1 | KX456212_p47 | hypothetical protein | phrog_689 | holin | lysis | 1 | 27782 | 28006 |
| ANS02676.1 | KX456212_p31 | hypothetical protein | phrog_2494 | minor head protein | head and packaging | 1 | 15578 | 16342 |
| ANS02690.1 | KX456212_p45 | tail-associated lysin | phrog_538 | minor tail protein | tail | 1 | 25583 | 26740 |
| ANS02661.2 | KX456212_p16 | hypothetical protein | phrog_4314 | unknown function | unknown function | 1 | 8886 | 9062 |
| ANS02660.1 | KX456212_p15 | hypothetical protein | phrog_3109 | unknown function | unknown function | 1 | 8535 | 8774 |
| ANS02650.1 | KX456212_p5 | Cro/Cl repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3129 | 3359 |
| ANS02652.1 | KX456212_p7 | hypothetical protein | phrog_823 | unknown function | unknown function | 1 | 4096 | 4428 |
| ANS02669.1 | KX456212_p24 | hypothetical protein | phrog_11381 | unknown function | unknown function | 1 | 12207 | 12527 |
| ANS02666.1 | KX456212_p21 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11101 | 11631 |
| ANS02671.1 | KX456212_p26 | transcriptional activator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 13144 | 13575 |
| ANS02682.1 | KX456212_p37 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 19931 | 20278 |
| ANS02672.1 | KX456212_p27 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13701 | 14033 |
| ANS02668.1 | KX456212_p23 | hypothetical protein | phrog_1083 | unknown function | unknown function | 1 | 11872 | 12210 |
| ANS02679.1 | KX456212_p34 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 18343 | 19239 |
| ANS02663.1 | KX456212_p18 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 9702 | 10274 |
| ANS02694.1 | KX456212_p49 | holin | phrog_297 | holin | lysis | 1 | 30010 | 30276 |
| ANS02673.2 | KX456212_p28 | hypothetical protein | phrog_26495 | unknown function | unknown function | 1 | 14023 | 14187 |
| ANS02689.1 | KX456212_p44 | distal tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 24682 | 25578 |
| ANS02684.1 | KX456212_p39 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 20508 | 20843 |
| ANS02680.1 | KX456212_p35 | hypothetical protein | phrog_1539 | Arc-like repressor | transcription regulation | 1 | 19254 | 19553 |
| ANS02696.1 | KX456212_p51 | hypothetical protein | phrog_31950 | unknown function | unknown function | 1 | 31963 | 32544 |
| ANS02665.1 | KX456212_p20 | dUTPase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 10663 | 11082 |
| ANS02649.1 | KX456212_p4 | repressor protein | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 2917 | 3108 |
| ANS02688.1 | KX456212_p43 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 22138 | 24669 |
| ANS02648.2 | KX456212_p3 | repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 1828 | 2688 |
| ANS02657.2 | KX456212_p12 | replicase | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 7018 | 7896 |
| ANS02664.1 | KX456212_p19 | hypothetical protein | phrog_6648 | unknown function | unknown function | 1 | 10271 | 10666 |
| ANS02686.1 | KX456212_p41 | hypothetical protein | phrog_1526 | unknown function | unknown function | 1 | 21489 | 21749 |
| ANS02651.1 | KX456212_p6 | antirepressor | phrog_373 | anti-repressor | transcription regulation | 1 | 3373 | 4083 |
| ANS02678.2 | KX456212_p33 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 17875 | 18339 |
| ANS02662.1 | KX456212_p17 | hypothetical protein | phrog_4149 | unknown function | unknown function | 1 | 9055 | 9648 |
| ANS02693.1 | KX456212_p48 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 28018 | 29985 |
| ANS02655.1 | KX456212_p10 | recombination protein | phrog_252 | Bet-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4949 | 5686 |
| ANS02683.1 | KX456212_p38 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 20271 | 20507 |
| ANS02659.2 | KX456212_p14 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 8130 | 8531 |
| ANS02681.1 | KX456212_p36 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 19555 | 19953 |
| ANS02653.1 | KX456212_p8 | hypothetical protein | phrog_5257 | unknown function | unknown function | 1 | 4430 | 4678 |
| ANS02654.1 | KX456212_p9 | transcriptional regulator | phrog_4416 | transcriptional regulator | transcription regulation | 1 | 4675 | 4848 |
| ANS02656.1 | KX456212_p11 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 5688 | 6728 |
| ANS02658.1 | KX456212_p13 | hypothetical protein | phrog_7699 | unknown function | unknown function | 1 | 7880 | 8137 |
| ANS02677.1 | KX456212_p32 | large terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 16393 | 17802 |
| ANS02674.1 | KX456212_p29 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 14180 | 15409 |
| ANS02685.2 | KX456212_p40 | major tail protein | phrog_117 | major tail protein | tail | 1 | 20854 | 21411 |
| ANS02646.1 | KX456212_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 1 | 1125 |
| ANS02691.1 | KX456212_p46 | receptor binding protein | phrog_1220 | head protein | head and packaging | 1 | 26737 | 27768 |
| ANS02695.1 | KX456212_p50 | lysin | phrog_291 | endolysin | lysis | 1 | 30273 | 31562 |
| ANS02675.1 | KX456212_p30 | hypothetical protein | phrog_25292 | unknown function | unknown function | 1 | 15406 | 15564 |