Genomic map of Human gokushovirus (KX513864)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX513864
Definition
Human gokushovirus isolate SH-CHD1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae.
DB of origin
NUCCORE
Length
5508
Host Name
metagenomic
Host domain
Bacteria
Is prophage?
undef
Number of proteins
4
%GC
49.4
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ15990.1 KX513864_p3 VP1 phrog_514 major head protein head and packaging 1 2478 4118
ARQ15991.1 KX513864_p4 VP2 phrog_18604 minor tail protein tail 1 4158 5003
ARQ15992.1 KX513864_p1 VP4 phrog_942 replication initiation protein DNA, RNA and nucleotide metabolism 1 1 1005
ARQ15993.1 KX513864_p2 peptidase M15 phrog_894 endolysin lysis 1 1388 1780