| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX513868 |
Definition |
Human gut gokushovirus isolate SH-CHD5, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae. |
DB of origin |
NUCCORE |
Length |
6042 |
Host Name |
metagenomic |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
5 |
%GC |
43.59 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARQ16013.1 | KX513868_p1 | VP2 | phrog_8742 | pilot protein for DNA ejection | tail | 1 | 5177 | 6042 |
| ARQ16013.1 | KX513868_p1 | VP2 | phrog_8742 | pilot protein for DNA ejection | tail | 1 | 1 | 4 |
| ARQ16009.1 | KX513868_p2 | VP4 | phrog_942 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 1020 |
| ARQ16010.1 | KX513868_p3 | peptidase M15 | phrog_894 | endolysin | lysis | 1 | 2011 | 2403 |
| ARQ16011.1 | KX513868_p4 | hypothetical protein | phrog_24309 | virion structural protein | head and packaging | 1 | 3108 | 3506 |
| ARQ16012.1 | KX513868_p5 | VP1 | phrog_514 | major head protein | head and packaging | 1 | 3503 | 5137 |