Genomic map of Human gut gokushovirus (KX513872)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX513872
Definition
Human gut gokushovirus isolate SH-CHD9, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae.
DB of origin
NUCCORE
Length
5024
Host Name
metagenomic
Host domain
Bacteria
Is prophage?
undef
Number of proteins
6
%GC
40.26
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ16024.1 KX513872_p1 VP4 phrog_942 replication initiation protein DNA, RNA and nucleotide metabolism 1 1 912
ARQ16025.1 KX513872_p2 VP5 phrog_1670 DNA binding protein DNA, RNA and nucleotide metabolism 1 1133 1441
ARQ16027.1 KX513872_p4 VP1 phrog_514 major head protein head and packaging 1 2154 3887
ARQ16028.1 KX513872_p5 VP2 phrog_8693 pilot protein for DNA ejection tail 1 3902 4630
ARQ16026.1 KX513872_p3 VP3 phrog_1642 virion structural protein head and packaging 1 1548 2030
ARQ16029.1 KX513872_p6 hypothetical protein phrog_23638 unknown function unknown function 1 4636 4875