| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KX513873 |
Definition |
Human gut gokushovirus isolate SH-CHD10, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae. |
DB of origin |
NUCCORE |
Length |
5631 |
Host Name |
metagenomic |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
4 |
%GC |
50.34 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ARQ16032.1 | KX513873_p3 | VP1 | phrog_514 | major head protein | head and packaging | 1 | 2675 | 4264 |
| ARQ16033.1 | KX513873_p4 | VP2 | phrog_18604 | minor tail protein | tail | 1 | 4277 | 5203 |
| ARQ16030.1 | KX513873_p1 | VP4 | phrog_942 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 1110 |
| ARQ16031.1 | KX513873_p2 | VP3 | phrog_1642 | virion structural protein | head and packaging | 1 | 2181 | 2678 |