Genomic map of Human gut gokushovirus (KX513873)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX513873
Definition
Human gut gokushovirus isolate SH-CHD10, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae.
DB of origin
NUCCORE
Length
5631
Host Name
metagenomic
Host domain
Bacteria
Is prophage?
undef
Number of proteins
4
%GC
50.34
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ16032.1 KX513873_p3 VP1 phrog_514 major head protein head and packaging 1 2675 4264
ARQ16033.1 KX513873_p4 VP2 phrog_18604 minor tail protein tail 1 4277 5203
ARQ16030.1 KX513873_p1 VP4 phrog_942 replication initiation protein DNA, RNA and nucleotide metabolism 1 1 1110
ARQ16031.1 KX513873_p2 VP3 phrog_1642 virion structural protein head and packaging 1 2181 2678