Genomic map of Human gut gokushovirus (KX513876)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX513876
Definition
Human gut gokushovirus isolate SH-CHD13, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae.
DB of origin
NUCCORE
Length
5637
Host Name
metagenomic
Host domain
Bacteria
Is prophage?
undef
Number of proteins
5
%GC
47.29
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ16041.1 KX513876_p2 peptidase M15 phrog_894 endolysin lysis 1 1358 1759
ARQ16043.1 KX513876_p4 VP1 phrog_514 major head protein head and packaging 1 2721 4388
ARQ16042.1 KX513876_p3 hypothetical protein singleton unknown function unknown function 1 2279 2704
ARQ16044.1 KX513876_p5 VP2 phrog_18604 minor tail protein tail 1 4427 5299
ARQ16040.1 KX513876_p1 VP4 phrog_942 replication initiation protein DNA, RNA and nucleotide metabolism 1 1 990