Genomic map of Human gut gokushovirus (KX513877)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KX513877
Definition
Human gut gokushovirus isolate SH-CHD14, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae.
DB of origin
NUCCORE
Length
5726
Host Name
metagenomic
Host domain
Bacteria
Is prophage?
undef
Number of proteins
5
%GC
45.65
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ARQ16047.1 KX513877_p3 hypothetical protein phrog_24309 virion structural protein head and packaging 1 2635 3105
ARQ16045.1 KX513877_p1 VP4 phrog_942 replication initiation protein DNA, RNA and nucleotide metabolism 1 1 957
ARQ16049.1 KX513877_p5 VP2 phrog_8742 pilot protein for DNA ejection tail 1 4810 5664
ARQ16046.1 KX513877_p2 peptidase M15 phrog_894 endolysin lysis 1 1598 1990
ARQ16048.1 KX513877_p4 VP1 phrog_514 major head protein head and packaging 1 3092 4771